 Reference
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 Reference hierarchy
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Organism specific
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Animals
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Mammals
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hsa Homo sapiens (human)
hsa_disease Homo sapiens (human) + Disease
hsa_drug Homo sapiens (human) + Drug
ptr Pan troglodytes (chimpanzee)
pps Pan paniscus (bonobo)
ggo Gorilla gorilla gorilla (western lowland gorilla)
pon Pongo abelii (Sumatran orangutan)
ppyg Pongo pygmaeus (Bornean orangutan)
nle Nomascus leucogenys (northern white-cheeked gibbon)
hmh Hylobates moloch (silvery gibbon)
ssyn Symphalangus syndactylus (siamang)
mcc Macaca mulatta (rhesus monkey)
mcf Macaca fascicularis (crab-eating macaque)
mthb Macaca thibetana thibetana (Pere David's macaque)
mni Macaca nemestrina (pig-tailed macaque)
csab Chlorocebus sabaeus (green monkey)
caty Cercocebus atys (sooty mangabey)
panu Papio anubis (olive baboon)
tge Theropithecus gelada (gelada)
mleu Mandrillus leucophaeus (drill)
rro Rhinopithecus roxellana (golden snub-nosed monkey)
rbb Rhinopithecus bieti (black snub-nosed monkey)
tfn Trachypithecus francoisi (Francois's langur)
pteh Piliocolobus tephrosceles (Ugandan red Colobus)
cang Colobus angolensis palliatus (Angola colobus)
cjc Callithrix jacchus (white-tufted-ear marmoset)
sbq Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
cimi Cebus imitator (Panamanian white-faced capuchin)
anan Aotus nancymaae (Ma's night monkey)
csyr Carlito syrichta (Philippine tarsier)
mmur Microcebus murinus (gray mouse lemur)
lcat Lemur catta (Ring-tailed lemur)
eruf Eulemur rufifrons (Bennett's brown lemur)
pcoq Propithecus coquereli (Coquerel's sifaka)
oga Otolemur garnettii (small-eared galago)
mmu Mus musculus (house mouse)
mcal Mus caroli (Ryukyu mouse)
mpah Mus pahari (shrew mouse)
rno Rattus norvegicus (rat)
mcoc Mastomys coucha (southern multimammate mouse)
anu Arvicanthis niloticus (African grass rat)
asyl Apodemus sylvaticus (European woodmouse)
mun Meriones unguiculatus (Mongolian gerbil)
cge Cricetulus griseus (Chinese hamster)
maua Mesocricetus auratus (golden hamster)
prob Phodopus roborovskii (desert hamster)
pleu Peromyscus leucopus (white-footed mouse)
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
morg Microtus oregoni (creeping vole)
mfot Alexandromys fortis (reed vole)
aamp Arvicola amphibius (Eurasian water vole)
cnl Chionomys nivalis (European snow vole)
ngi Nannospalax galili (Upper Galilee mountains blind mole rat)
hgl Heterocephalus glaber (naked mole-rat)
cpoc Cavia porcellus (domestic guinea pig)
ccan Castor canadensis (American beaver)
dord Dipodomys ordii (Ord's kangaroo rat)
dsp Dipodomys spectabilis (banner-tailed kangaroo rat)
dmer Dipodomys merriami (Merriam's kangaroo rat)
plop Perognathus longimembris pacificus (Pacific pocket mouse)
ncar Sciurus carolinensis (gray squirrel)
svul Sciurus vulgaris (Eurasian red squirrel)
mmma Marmota marmota marmota (Alpine marmot)
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
ocu Oryctolagus cuniculus (rabbit)
opi Ochotona princeps (American pika)
ocz Ochotona curzoniae (black-lipped pika)
tup Tupaia chinensis (Chinese tree shrew)
gvr Galeopterus variegatus (Sunda flying lemur)
cfa Canis lupus familiaris (dog)
clud Canis lupus dingo (dingo)
vvp Vulpes vulpes (red fox)
vlg Vulpes lagopus (Arctic fox)
npo Nyctereutes procyonoides (raccoon dog)
aml Ailuropoda melanoleuca (giant panda)
umr Ursus maritimus (polar bear)
uah Ursus arctos (brown bear)
uar Ursus americanus (American black bear)
elk Enhydra lutris kenyoni (northern sea otter)
llv Lutra lutra (Eurasian river otter)
mpuf Mustela putorius furo (domestic ferret)
mnp Mustela nigripes (black-footed ferret)
mlk Mustela lutreola (European mink)
nvs Neogale vison (American mink)
oro Odobenus rosmarus divergens (Pacific walrus)
eju Eumetopias jubatus (Steller sea lion)
zca Zalophus californianus (California sea lion)
mlx Mirounga leonina (Southern elephant seal)
mano Mirounga angustirostris (Northern elephant seal)
nsu Neomonachus schauinslandi (Hawaiian monk seal)
lww Leptonychotes weddellii (Weddell seal)
fca Felis catus (domestic cat)
pyu Herpailurus yagouaroundi (jaguarundi)
pcoo Puma concolor (puma)
pbg Prionailurus bengalensis (leopard cat)
pviv Prionailurus viverrinus (fishing cat)
lruf Lynx rufus (bobcat)
lgf Leopardus geoffroyi (Geoffroy's cat)
aju Acinonyx jubatus (cheetah)
ptg Panthera tigris altaica (Amur tiger)
ppad Panthera pardus (leopard)
puc Panthera uncia (snow leopard)
plez Panthera leo (lion)
hhv Hyaena hyaena (striped hyena)
ccru Crocuta crocuta (spotted hyena)
bta Bos taurus (cow)
bom Bos mutus (wild yak)
biu Bos indicus (zebu cattle)
bjv Bos javanicus (banteng)
bbub Bubalus bubalis (water buffalo)
bke Bubalus kerabau (carabao)
bbis Bison bison bison (American bison)
chx Capra hircus (goat)
oas Ovis aries (sheep)
ocan Ovis canadensis (bighorn sheep)
btax Budorcas taxicolor (takin)
csum Capricornis sumatraensis (Sumatran serow)
oda Oryx dammah (scimitar-horned oryx)
ccad Cervus canadensis (wapiti)
mree Muntiacus reevesi (Reeves' muntjac)
ovr Odocoileus virginianus (white-tailed deer)
mbez Moschus berezovskii (Chinese forest musk deer)
ssc Sus scrofa (pig)
cfr Camelus ferus (Wild Bactrian camel)
cbai Camelus bactrianus (Bactrian camel)
cdk Camelus dromedarius (Arabian camel)
vpc Vicugna pacos (alpaca)
bacu Balaenoptera acutorostrata scammoni (minke whale)
bmus Balaenoptera musculus (blue whale)
lve Lipotes vexillifer (Yangtze River dolphin)
oor Orcinus orca (killer whale)
lalb Lagenorhynchus albirostris (white-beaked dolphin)
gmf Globicephala melas (long-finned pilot whale)
ddp Delphinus delphis (saddleback dolphin)
scoo Stenella coeruleoalba (striped dolphin)
dle Delphinapterus leucas (beluga whale)
pcad Physeter macrocephalus (sperm whale)
psiu Phocoena sinus (vaquita)
pphc Phocoena phocoena (harbor porpoise)
nasi Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
ecb Equus caballus (horse)
epz Equus przewalskii (Przewalski's horse)
eai Equus asinus (ass)
myb Myotis brandtii (Brandt's bat)
myd Myotis davidii (David's myotis)
mmyo Myotis myotis (greater mouse-eared bat)
mlf Myotis lucifugus (little brown bat)
mdt Myotis daubentonii (Daubenton's bat)
myum Myotis yumanensis (Yuma myotis)
pkl Pipistrellus kuhlii (Kuhl's pipistrelle)
efus Eptesicus fuscus (big brown bat)
pots Plecotus auritus (brown big-eared bat)
mna Miniopterus natalensis (Natal long-fingered bat)
dro Desmodus rotundus (common vampire bat)
shon Sturnira hondurensis
ajm Artibeus jamaicensis (Jamaican fruit-eating bat)
pdic Phyllostomus discolor (pale spear-nosed bat)
phas Phyllostomus hastatus (greater spear-nosed bat)
mmf Molossus molossus (Pallas's mastiff bat)
ppam Pteronotus mesoamericanus (Parnell's mustached bat)
hai Hipposideros armiger (great roundleaf bat)
rfq Rhinolophus ferrumequinum (greater horseshoe bat)
pale Pteropus alecto (black flying fox)
pgig Pteropus vampyrus (Indian flying fox)
pvp Pteropus vampyrus (large flying fox)
ray Rousettus aegyptiacus (Egyptian rousette)
mjv Manis javanica (Malayan pangolin)
tod Talpa occidentalis (Iberian mole)
sara Sorex araneus (European shrew)
sfum Sorex fumeus (smoky shrew)
setr Suncus etruscus (white-toothed pygmy shrew)
lav Loxodonta africana (African savanna elephant)
tmu Trichechus manatus latirostris (Florida manatee)
etf Echinops telfairi (small Madagascar hedgehog)
dnm Dasypus novemcinctus (nine-banded armadillo)
mdo Monodelphis domestica (gray short-tailed opossum)
gas Gracilinanus agilis (agile gracile opossum)
shr Sarcophilus harrisii (Tasmanian devil)
afz Antechinus flavipes (yellow-footed antechinus)
pcw Phascolarctos cinereus (koala)
tvp Trichosurus vulpecula (common brushtail)
pbrv Petaurus breviceps papuanus (sugar glider)
mlao Macrotis lagotis (bilby)
oaa Ornithorhynchus anatinus (platypus)
tacu Tachyglossus aculeatus (Australian echidna)
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Birds
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gga Gallus gallus (chicken)
pcoc Phasianus colchicus (Ring-necked pheasant)
mgp Meleagris gallopavo (turkey)
cjo Coturnix japonica (Japanese quail)
tpai Tympanuchus pallidicinctus (lesser prairie-chicken)
lmut Lagopus muta (rock ptarmigan)
nmel Numida meleagris (helmeted guineafowl)
apla Anas platyrhynchos (mallard)
aacu Anas acuta (northern pintail)
oja Oxyura jamaicensis (ruddy duck)
acyg Anser cygnoides (swan goose)
cata Cygnus atratus (black swan)
aful Aythya fuligula (tufted duck)
tgu Taeniopygia guttata (zebra finch)
lsr Lonchura striata (white-rumped munia)
vmc Vidua macroura (Pin-tailed whydah)
vcha Vidua chalybeata (village indigobird)
aib Anomalospiza imberbis (cuckoo-finch)
scan Serinus canaria (common canary)
pmoa Passer montanus (Eurasian tree sparrow)
otc Onychostruthus taczanowskii (white-rumped snowfinch)
pruf Pyrgilauda ruficollis (rufous-necked snowfinch)
atrc Agelaius tricolor (tricolored blackbird)
mate Molothrus ater (brown-headed cowbird)
maen Molothrus aeneus (bronzed cowbird)
gfr Geospiza fortis (medium ground-finch)
fab Ficedula albicollis (collared flycatcher)
oma Oenanthe melanoleuca (Eastern black-eared wheatear)
phi Pseudopodoces humilis (Tibetan ground-tit)
pmaj Parus major (Great Tit)
ccae Cyanistes caeruleus (blue tit)
ccw Corvus cornix (hooded crow)
cbrc Corvus brachyrhynchos (American crow)
acoe Aphelocoma coerulescens (scrub jay)
etl Empidonax traillii (willow flycatcher)
zab Zonotrichia albicollis (white-throated sparrow)
zle Zonotrichia leucophrys gambelii (white-crowned sparrow)
achl Acanthisitta chloris (rifleman)
svg Sturnus vulgaris (common starling)
mmea Malurus melanocephalus (red-backed fairy wren)
hrt Hirundo rustica (Barn swallow)
sati Sylvia atricapilla (blackcap)
cfai Chamaea fasciata (wrentit)
ccic Cinclus cinclus (white-throated dipper)
nnt Nestor notabilis (Kea)
shab Strigops habroptila (Kakapo)
pocc Pezoporus occidentalis (night parrot)
fpg Falco peregrinus (peregrine falcon)
fch Falco cherrug (Saker falcon)
frs Falco rusticolus (gyrfalcon)
ccri Cariama cristata (Red-legged seriema)
acun Athene cunicularia (burrowing owl)
anoc Athene noctua (little owl)
sura Strix uralensis (Ural owl)
tala Tyto alba (Barn owl)
achc Aquila chrysaetos chrysaetos (golden eagle)
hald Haliaeetus albicilla (white-tailed eagle)
hle Haliaeetus leucocephalus (bald eagle)
agen Astur gentilis (Northern goshawk)
hhar Harpia harpyja (harpy eagle)
bbut Buteo buteo (common buzzard)
gcl Gymnogyps californianus (California condor)
csti Colius striatus (speckled mousebird)
ldi Leptosomus discolor (cuckoo roller)
mnb Merops nubicus (carmine bee-eater)
dpub Dryobates pubescens (Downy woodpecker)
ppus Pogoniulus pusillus (red-fronted tinkerbird)
iin Indicator indicator (greater honeyguide)
avit Apaloderma vittatum (bar-tailed trogon)
brhi Buceros rhinoceros silvestris (rhinoceros hornbill)
egz Egretta garzetta (little egret)
nni Nipponia nippon (crested ibis)
pcri Pelecanus crispus (Dalmatian pelican)
pcao Phalacrocorax carbo (great cormorant)
parx Phalacrocorax aristotelis (European shag)
padl Pygoscelis adeliae (Adelie penguin)
afor Aptenodytes forsteri (emperor penguin)
fga Fulmarus glacialis (Northern fulmar)
cbor Calonectris borealis (Cory's shearwater)
gste Gavia stellata (red-throated loon)
cboy Ciconia boyciana (Oriental stork)
mame Mycteria americana (wood stork)
clv Columba livia (rock pigeon)
cnic Caloenas nicobarica (Nicobar pigeon)
mui Mesitornis unicolor (brown roatelo)
pguu Pterocles gutturalis (yellow-throated sandgrouse)
plet Phaethon lepturus (White-tailed tropicbird)
ehs Eurypyga helias (sunbittern)
cmac Chlamydotis macqueenii (Macqueen's bustard)
cuca Cuculus canorus (common cuckoo)
pcur Phaenicophaeus curvirostris (chestnut-breasted malkoha)
teo Tauraco erythrolophus (red-crested turaco)
breg Balearica regulorum gibbericeps (East African grey crowned-crane)
game Grus americana (Whooping crane)
oha Opisthocomus hoazin (hoatzin)
acar Antrostomus carolinensis (chuck-will's-widow)
ceur Caprimulgus europaeus (Eurasian nightjar)
cpea Chaetura pelagica (chimney swift)
cvf Charadrius vociferus (killdeer)
rtd Rissa tridactyla (black-legged kittiwake)
crid Chroicocephalus ridibundus (black-headed gull)
lmic Larus michahellis (yellow-legged gull)
narq Numenius arquata (Eurasian curlew)
aam Apteryx mantelli mantelli (North Island brown kiwi)
arow Apteryx rowi (Okarito brown kiwi)
npd Nothoprocta perdicaria (Chilean tinamou)
tgt Tinamus guttatus (white-throated tinamou)
dne Dromaius novaehollandiae (emu)
scam Struthio camelus australis (South African ostrich)
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Reptiles
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asn Alligator sinensis (Chinese alligator)
amj Alligator mississippiensis (American alligator)
cpoo Crocodylus porosus (Australian saltwater crocodile)
ggn Gavialis gangeticus (Gharial)
pss Pelodiscus sinensis (Chinese soft-shelled turtle)
ciz Carettochelys insculpta (pitted-shelled turtle)
cmy Chelonia mydas (green sea turtle)
ccay Caretta caretta (Loggerhead turtle)
lkp Lepidochelys kempii (Atlantic ridley)
nds Natator depressus (flatback sea turtle)
dcc Dermochelys coriacea (leatherback sea turtle)
cpic Chrysemys picta (western painted turtle)
tst Trachemys scripta elegans (red-eared slider)
eob Emys orbicularis (European pond turtle)
cabi Chelonoidis abingdonii (Abingdon island giant tortoise)
mrv Mauremys reevesii (Reeves's turtle)
emq Emydura macquarii macquarii (eastern short-necked turtle)
acs Anolis carolinensis (green anole)
asao Anolis sagrei ordinatus (Brown anole)
pvt Pogona vitticeps (central bearded dragon)
sund Sceloporus undulatus (fence lizard)
pbi Python bivittatus (Burmese python)
pmur Protobothrops mucrosquamatus (Taiwan habu)
ctig Crotalus tigris (Tiger rattlesnake)
tsr Thamnophis sirtalis (common garter snake)
pgut Pantherophis guttatus (corn snake)
pcae Pituophis catenifer annectens (San Diego gophersnake)
apri Ahaetulla prasina (Asian vine snake)
ptex Pseudonaja textilis (eastern brown snake)
nss Notechis scutatus (mainland tiger snake)
vko Varanus komodoensis (Komodo dragon)
pmua Podarcis muralis (common wall lizard)
praf Podarcis raffonei (Aeolian wall lizard)
zvi Zootoca vivipara (common lizard)
hcg Hemicordylus capensis (graceful crag lizard)
gja Gekko japonicus (Schlegel's Japanese gecko)
stow Sphaerodactylus townsendi (Townsend's least gecko)
emc Eublepharis macularius (Leopard gecko)
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Amphibians
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xla Xenopus laevis (African clawed frog)
xtr Xenopus tropicalis (tropical clawed frog)
npr Nanorana parkeri (Xizang Plateau frog)
rtem Rana temporaria (common frog)
acat Aquarana catesbeiana (American bullfrog)
pads Pyxicephalus adspersus (African bullfrog)
bbuf Bufo bufo (common toad)
bgar Bufo gargarizans (Asiatic toad)
dtc Dendrobates tinctorius (dyeing poison frog)
hsq Hyla sarda (Sardinian treefrog)
pcob Pseudophryne corroboree (corroboree frog)
pwl Pleurodeles waltl (Iberian ribbed newt)
muo Microcaecilia unicolor
gsh Geotrypetes seraphini (Gaboon caecilian)
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Fishes
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dre Danio rerio (zebrafish)
daes Danio aesculapii (panther danio)
srx Sinocyclocheilus rhinocerous
sanh Sinocyclocheilus anshuiensis
sgh Sinocyclocheilus grahami (golden-line barbel)
ccar Cyprinus carpio (common carp)
caua Carassius auratus (goldfish)
cgib Carassius gibelio (silver crucian carp)
ptet Puntigrus tetrazona (Sumatra barb)
lroh Labeo rohita (rohu)
grf Garra rufa (doctor fish)
omc Onychostoma macrolepis
pprm Pimephales promelas (fathead minnow)
rkg Rhinichthys klamathensis goyatoka (western speckled dace)
mamb Megalobrama amblycephala (Wuchang bream)
cide Ctenopharyngodon idella (grass carp)
cery Chanodichthys erythropterus (predatory carp)
masi Myxocyprinus asiaticus (Chinese sucker)
tros Triplophysa rosa
tdw Triplophysa dalaica
manu Misgurnus anguillicaudatus (oriental weatherfish)
pdab Paramisgurnus dabryanus (large-scale loach)
ipu Ictalurus punctatus (channel catfish)
ifu Ictalurus furcatus (blue catfish)
phyp Pangasianodon hypophthalmus (striped catfish)
smeo Silurus meridionalis (southern catfish)
tfd Tachysurus fulvidraco (yellow catfish)
tvc Tachysurus vachellii
cgar Clarias gariepinus (North African catfish)
ngra Neoarius graeffei (lesser salmon catfish)
trn Trichomycterus rosablanca
amex Astyanax mexicanus (Mexican tetra)
cmao Colossoma macropomum (tambaqui)
eee Electrophorus electricus (electric eel)
char Clupea harengus (Atlantic herring)
spil Sardina pilchardus (sardine)
asad Alosa sapidissima (American shad)
tru Takifugu rubripes (torafugu)
tfs Takifugu flavidus (sansaifugu)
tng Tetraodon nigroviridis (spotted green pufferfish)
ncc Notothenia coriiceps (black rockcod)
tben Trematomus bernacchii (emerald rockcod)
cgob Cottoperca gobio
pgeo Pseudochaenichthys georgianus (South Georgia icefish)
gacu Gymnodraco acuticeps
emac Eleginops maclovinus (Patagonian blennie)
ely Epinephelus lanceolatus (giant grouper)
efo Epinephelus fuscoguttatus (brown-marbled grouper)
plep Plectropomus leopardus (leopard coralgrouper)
sluc Sander lucioperca (pikeperch)
svit Sander vitreus (walleye)
ecra Etheostoma cragini (Arkansas darter)
esp Etheostoma spectabile (orangethroat darter)
pflv Perca flavescens (yellow perch)
pflt Perca fluviatilis (European perch)
gat Gasterosteus aculeatus (three-spined stickleback)
ppug Pungitius pungitius (ninespine stickleback)
afb Anoplopoma fimbria (sablefish)
clum Cyclopterus lumpus (lumpfish)
pswi Pseudoliparis swirei (Mariana hadal snailfish)
cana Clinocottus analis (woolly sculpin)
cve Cebidichthys violaceus (monkeyface prickleback)
amir Anarhichas minor (spotted wolffish)
msam Micropterus salmoides (largemouth bass)
schu Siniperca chuatsi (mandarin fish)
earm Enoplosus armatus (old wife)
cud Cheilinus undulatus (humphead wrasse)
spul Semicossyphus pulcher (California sheephead)
lmix Labrus mixtus (cuckoo wrasse)
htc Halichoeres trimaculatus (threespot wrasse)
alat Acanthopagrus latus (yellowfin seabream)
astr Antennarius striatus (striated frogfish)
pklu Pempheris klunzingeri
lco Larimichthys crocea (large yellow croaker)
mze Maylandia zebra (zebra mbuna)
onl Oreochromis niloticus (Nile tilapia)
oau Oreochromis aureus (blue tilapia)
ola Oryzias latipes (Japanese medaka)
oml Oryzias melastigma (Indian medaka)
csai Cololabis saira (Pacific saury)
xma Xiphophorus maculatus (southern platyfish)
xco Xiphophorus couchianus (Monterrey platyfish)
xhe Xiphophorus hellerii (green swordtail)
pret Poecilia reticulata (guppy)
pfor Poecilia formosa (Amazon molly)
plai Poecilia latipinna (sailfin molly)
pmei Poecilia mexicana (shortfin molly)
gaf Gambusia affinis (western mosquitofish)
pprl Poeciliopsis prolifica (blackstripe livebearer)
cvg Cyprinodon variegatus (sheepshead minnow)
ctul Cyprinodon tularosa (White Sands pupfish)
gmu Girardinichthys multiradiatus (darkedged splitfin)
nfu Nothobranchius furzeri (turquoise killifish)
kmr Kryptolebias marmoratus (mangrove rivulus)
alim Austrofundulus limnaeus (annual killifish)
nwh Nematolebias whitei (Rio pearlfish)
ltu Leuresthes tenuis (California grunion)
mcep Mugil cephalus (flathead mullet)
aoce Amphiprion ocellaris (clown anemonefish)
eja Embiotoca jacksoni (black perch)
bfre Brachyistius frenatus (kelp perch)
lcf Lates calcarifer (barramundi perch)
csem Cynoglossus semilaevis (tongue sole)
pov Paralichthys olivaceus (Japanese flounder)
ssen Solea senegalensis (Senegalese sole)
ssoe Solea solea (common sole)
hhip Hippoglossus hippoglossus (Atlantic halibut)
hsp Hippoglossus stenolepis (Pacific halibut)
pplt Pleuronectes platessa (European plaice)
smau Scophthalmus maximus (turbot)
sdu Seriola dumerili (greater amberjack)
slal Seriola lalandi dorsalis (Yellowtail amberjack)
xgl Xiphias gladius (swordfish)
hcq Hippocampus comes (tiger tail seahorse)
sscv Syngnathus scovelli (Gulf pipefish)
sbia Syngnathoides biaculeatus (alligator pipefish)
pee Phycodurus eques (leafy seadragon)
ptao Phyllopteryx taeniolatus (common seadragon)
bpec Boleophthalmus pectinirostris (great blue-spotted mudskipper)
eny Eucyclogobius newberryi (tidewater goby)
malb Monopterus albus (swamp eel)
bspl Betta splendens (Siamese fighting fish)
sjo Scomber japonicus (chub mackerel)
ssco Scomber scombrus (Atlantic mackerel)
tty Thunnus thynnus (Atlantic bluefin tuna)
gmh Gadus morhua (Atlantic cod)
sasa Salmo salar (Atlantic salmon)
stru Salmo trutta (river trout)
otw Oncorhynchus tshawytscha (Chinook salmon)
omy Oncorhynchus mykiss (rainbow trout)
ogo Oncorhynchus gorbuscha (pink salmon)
one Oncorhynchus nerka (sockeye salmon)
oki Oncorhynchus kisutch (coho salmon)
oke Oncorhynchus keta (chum salmon)
omm Oncorhynchus masou masou (cherry salmon)
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
salp Salvelinus sp. IW2-2015 (Arctic char)
snh Salvelinus namaycush (lake trout)
sfon Salvelinus fontinalis (brook trout)
cclu Coregonus clupeaformis (lake whitefish)
els Esox lucius (northern pike)
oep Osmerus eperlanus (European smelt)
sfm Scleropages formosus (Asian bonytongue)
pki Paramormyrops kingsleyae
aang Anguilla anguilla (European eel)
arot Anguilla rostrata (American eel)
ccog Conger conger (European conger)
loc Lepisosteus oculatus (spotted gar)
pspa Polyodon spathula (Mississippi paddlefish)
arut Acipenser ruthenus (sterlet)
psex Polypterus senegalus (gray bichir)
lcm Latimeria chalumnae (coelacanth)
|
other Vertebrates
|
cmk Callorhinchus milii (elephant shark)
rtp Rhincodon typus (whale shark)
cpla Chiloscyllium plagiosum (whitespotted bambooshark)
cpun Chiloscyllium punctatum (brownbanded bambooshark)
hoc Hemiscyllium ocellatum (epaulette shark)
scau Scyliorhinus canicula (smaller spotted catshark)
stoz Scyliorhinus torazame (cloudy catshark)
leri Leucoraja erinaceus (little skate)
haka Hemitrygon akajei (red stingray)
pmrn Petromyzon marinus (sea lamprey)
lrj Lethenteron reissneri (Far Eastern brook lamprey)
|
other Chordates
|
bfo Branchiostoma floridae (Florida lancelet)
bbel Branchiostoma belcheri (Belcher's lancelet)
cin Ciona intestinalis (yellow sea squirt)
sclv Styela clava (leathery sea squirt)
clep Clavelina lepadiformis (light-bulb sea squirt)
odo Oikopleura dioica
|
other Deuterostomes
|
spu Strongylocentrotus purpuratus (purple sea urchin)
lpic Lytechinus pictus (painted urchin)
lvg Lytechinus variegatus (green sea urchin)
ajj Apostichopus japonicus (Japanese sea cucumber)
aplc Acanthaster planci (crown-of-thorns starfish)
pmin Patiria miniata (bat star)
arun Luidia clathrata (European starfish)
aamu Asterias amurensis (Northern Pacific seastar)
afil Amphiura filiformis
ajc Anneissia japonica (feather star)
sko Saccoglossus kowalevskii (acorn worm)
pfll Ptychodera flava
|
Insects
|
dme Drosophila melanogaster (fruit fly)
der Drosophila erecta
dse Drosophila sechellia
dsi Drosophila simulans
dya Drosophila yakuba
dan Drosophila ananassae
dsr Drosophila serrata
dpo Drosophila pseudoobscura
dpe Drosophila persimilis
dmn Drosophila miranda
dwi Drosophila willistoni
dgr Drosophila grimshawi
dmo Drosophila mojavensis
daz Drosophila arizonae
dnv Drosophila navojoa
dhe Drosophila hydei
dvi Drosophila virilis
ccat Ceratitis capitata (Mediterranean fruit fly)
bod Bactrocera oleae (olive fruit fly)
bdr Bactrocera dorsalis (oriental fruit fly)
rze Rhagoletis zephyria (snowberry fruit fly)
aoq Anastrepha obliqua (West Indian fruit fly)
alud Anastrepha ludens (Mexican fruit fly)
tda Teleopsis dalmanni (Malaysian stalk-eyed fly)
mde Musca domestica (house fly)
scac Stomoxys calcitrans (stable fly)
lcq Lucilia cuprina (Australian sheep blowfly)
lsq Lucilia sericata (common green bottle fly)
cvj Calliphora vicina (urban bluebottle blowfly)
gfs Glossina fuscipes (tsetse fly)
ecoe Eupeodes corollae
clon Condylostylus longicornis
his Hermetia illucens (black soldier fly)
aga Anopheles gambiae (malaria mosquito)
acoz Anopheles coluzzii
aara Anopheles arabiensis
amer Anopheles merus
aste Anopheles stephensi (Asian malaria mosquito)
amap Anopheles maculipalpis
afun Anopheles funestus (African malaria mosquito)
amou Anopheles moucheti
amrs Anopheles marshallii
anil Anopheles nili
aali Anopheles albimanus
adar Anopheles darlingi (American malaria mosquito)
acos Anopheles coustani
aag Aedes aegypti (yellow fever mosquito)
aalb Aedes albopictus (Asian tiger mosquito)
asua Armigeres subalbatus
cqu Culex quinquefasciatus (southern house mosquito)
cpii Culex pipiens pallens (northern house mosquito)
cbri Culicoides brevitarsis
cns Contarinia nasturtii (swede midge)
bcoo Bradysia coprophila
lll Lutzomyia longipalpis
ppap Phlebotomus papatasi
cfel Ctenocephalides felis (cat flea)
bmor Bombyx mori (domestic silkworm)
bman Bombyx mandarina (wild silkworm)
msex Manduca sexta (tobacco hornworm)
dpl Danaus plexippus (monarch butterfly)
bany Bicyclus anynana (squinting bush brown)
mju Maniola jurtina (meadow brown)
niq Nymphalis io (European peacock)
vcd Vanessa cardui (painted lady)
mcix Melitaea cinxia (Glanville fritillary)
pmac Papilio machaon (common yellow swallowtail)
ppot Papilio polytes (common Mormon)
pxu Papilio xuthus (Asian swallowtail)
bphi Battus philenor (pipe-vine swallowtail)
prap Pieris rapae (cabbage white)
pbx Pieris brassicae (large cabbage white)
pnap Pieris napi (green-veined white)
zce Zerene cesonia (dogface butterfly)
ccrc Colias croceus (clouded yellow)
lsin Leptidea sinapis (Wood White)
aage Aricia agestis (brown argus)
haw Helicoverpa armigera (cotton bollworm)
hze Helicoverpa zea (corn earworm)
tnl Trichoplusia ni (cabbage looper)
sliu Spodoptera litura (tobacco cutworm)
ofu Ostrinia furnacalis (Asian corn borer)
onu Ostrinia nubilalis (European corn borer)
atra Amyelois transitella (navel orangeworm)
gmw Galleria mellonella (greater wax moth)
eclr Epargyreus clarus
pxy Plutella xylostella (diamondback moth)
pgw Pectinophora gossypiella (pink bollworm)
lgly Leguminivora glycinivorella (soybean pod borer)
cstb Cydia strobilella (spruce-seed moth)
cfum Choristoneura fumiferana (eastern spruce budworm)
tca Tribolium castaneum (red flour beetle)
tmol Tenebrio molitor (yellow mealworm)
dpa Dendroctonus ponderosae (mountain pine beetle)
esim Euwallacea similis
efor Euwallacea fornicatus (polyphagous shot-hole borer)
ity Ips typographus (European spruce bark beetle)
soy Sitophilus oryzae (rice weevil)
rfg Rhynchophorus ferrugineus (red palm weevil)
agrg Anthonomus grandis grandis (boll weevil)
atd Aethina tumida (small hive beetle)
cset Coccinella septempunctata (seven-spotted ladybird)
haxr Harmonia axyridis (harlequin ladybird)
agb Anoplophora glabripennis (Asian longhorned beetle)
ldc Leptinotarsa decemlineata (Colorado potato beetle)
dvv Diabrotica virgifera virgifera (western corn rootworm)
nvl Nicrophorus vespilloides (burying beetle)
dcor Dalotia coriaria (greenhouse rove beetle)
apln Agrilus planipennis (emerald ash borer)
ppyr Photinus pyralis (common eastern firefly)
otu Onthophagus taurus (bull-headed dung beetle)
ccrn Chrysoperla carnea
ame Apis mellifera (honey bee)
acer Apis cerana (Asiatic honeybee)
alab Apis laboriosa (Himalayan honeybee)
adr Apis dorsata (giant honeybee)
aflr Apis florea (little honeybee)
bim Bombus impatiens (common eastern bumble bee)
bbif Bombus bifarius (two-form bumblebee)
bvk Bombus vosnesenskii (yellow-faced bumblebee)
bvan Bombus vancouverensis nearcticus
bhun Bombus huntii (Hunt bumble bee)
bter Bombus terrestris (buff-tailed bumblebee)
baff Bombus affinis (rusty patched bumble bee)
bpyo Bombus pyrosoma
bpas Bombus pascuorum (common carder bee)
fvi Frieseomelitta varia
ccal Ceratina calcarata (carpenter bee)
obb Osmia bicornis bicornis (red mason bee)
olg Osmia lignaria (orchard mason bee)
mgen Megalopta genalis
apur Augochlora pura
nmea Nomia melanderi (Alkali bee)
cgig Colletes gigas
soc Solenopsis invicta (red fire ant)
mpha Monomorium pharaonis (pharaoh ant)
aec Acromyrmex echinatior (Panamanian leafcutter ant)
acep Atta cephalotes (leaf cutting ant)
acoc Atta colombica
mzt Mycetomoellerius zeteki
ccoa Cyphomyrmex costatus
tcz Trachymyrmex cornetzi
tsep Trachymyrmex septentrionalis
pbar Pogonomyrmex barbatus (red harvester ant)
vem Vollenhovia emeryi
cobs Cardiocondyla obscurior
tln Temnothorax longispinosus
tame Temnothorax americanus
tny Temnothorax nylanderi
hst Harpegnathos saltator (Jerdon's jumping ant)
dqu Dinoponera quadriceps
cfo Camponotus floridanus (Florida carpenter ant)
fex Formica exsecta (narrow-headed ant)
pmec Polyergus mexicanus
lhu Linepithema humile (Argentine ant)
pgc Pseudomyrmex gracilis (graceful twig ant)
obo Ooceraea biroi (clonal raider ant)
pcf Polistes canadensis
pfuc Polistes fuscatus (common paper wasp)
vps Vespula pensylvanica (western yellowjacket)
vcrb Vespa crabro (European hornet)
vve Vespa velutina (Asian hornet)
nvi Nasonia vitripennis (jewel wasp)
csol Ceratosolen solmsi marchali (fig wasp)
tpre Trichogramma pretiosum
lht Leptopilina heterotoma
lbd Leptopilina boulardi
mdl Microplitis demolitor
cglo Cotesia glomerata
ctyp Cotesia typhae
fas Fopius arisanus
dam Diachasma alloeum
agif Aphidius gifuensis
cins Chelonus insularis
vcan Venturia canescens
ccin Cephus cinctus (wheat stem sawfly)
dsm Diprion similis
npt Neodiprion pinetum (white pine sawfly)
nfb Neodiprion fabricii
nlo Neodiprion lecontei (redheaded pine sawfly)
nvg Neodiprion virginianus
aroa Athalia rosae (coleseed sawfly)
api Acyrthosiphon pisum (pea aphid)
dnx Diuraphis noxia (Russian wheat aphid)
ags Aphis gossypii (cotton aphid)
rmd Rhopalosiphum maidis (corn leaf aphid)
acoo Adelges cooleyi (spruce gall adelgid)
dvt Daktulosphaira vitifoliae (grape phylloxera)
btab Bemisia tabaci (sweet potato whitefly)
dci Diaphorina citri (Asian citrus psyllid)
clec Cimex lectularius (bed bug)
hhal Halyomorpha halys (brown marmorated stink bug)
nlu Nilaparvata lugens (brown planthopper)
lda Lycorma delicatula (spotted lanternfly)
hvi Homalodisca vitripennis (glassy-winged sharpshooter)
mqu Macrosteles quadrilineatus (aster leafhopper)
phu Pediculus humanus corporis (human body louse)
foc Frankliniella occidentalis (western flower thrips)
tpal Thrips palmi (melon thrips)
zne Zootermopsis nevadensis (dampwood termite)
csec Cryptotermes secundus (drywood termite)
pame Periplaneta americana (American cockroach)
sgre Schistocerca gregaria (desert locust)
bror Bacillus rossius redtenbacheri
iel Ischnura elegans (blue-tailed damselfly)
hamr Hetaerina americana (American ruby spot damselfly)
|
Non-insect arthropods
|
fcd Folsomia candida
dpx Daphnia pulex (common water flea)
dmk Daphnia magna (water flea)
dpz Daphnia pulicaria
dcar Daphnia carinata
afra Artemia franciscana
eaf Eurytemora carolleeae
lsm Lepeophtheirus salmonis (salmon louse)
tcf Tigriopus californicus (tidepool copepod)
pvm Penaeus vannamei (Pacific white shrimp)
pja Penaeus japonicus (kuruma prawn)
pchn Penaeus chinensis (fleshy prawn)
pmoo Penaeus monodon (black tiger shrimp)
hame Homarus americanus (American lobster)
pcla Procambarus clarkii (red swamp crayfish)
cqd Cherax quadricarinatus (Australian red claw crayfish)
ptru Portunus trituberculatus (swimming crab)
sprm Scylla paramamosain (green mud crab)
esn Eriocheir sinensis (Chinese mitten crab)
mnz Macrobrachium nipponense (oriental river prawn)
mrj Macrobrachium rosenbergii (giant freshwater prawn)
porn Panulirus ornatus (ornate spiny lobster)
cbrm Coenobita brevimanus (land hermit crab)
oot Oratosquilla oratoria (Japanese mantis shrimp)
hazt Hyalella azteca
ppoi Pollicipes pollicipes (gooseneck barnacle)
isc Ixodes scapularis (black-legged tick)
dsv Dermacentor silvarum
dalb Dermacentor albipictus (winter tick)
rsan Rhipicephalus sanguineus (brown dog tick)
rmp Rhipicephalus microplus (southern cattle tick)
hlg Haemaphysalis longicornis (longhorned tick)
oti Ornithodoros turicata (relapsing fever tick)
vde Varroa destructor (honeybee mite)
vja Varroa jacobsoni
goe Galendromus occidentalis (western predatory mite)
tut Tetranychus urticae (two-spotted spider mite)
bobo Brevipalpus obovatus
dpte Dermatophagoides pteronyssinus (European house dust mite)
dfr Dermatophagoides farinae (American house dust mite)
ont Oppia nitens
cscu Centruroides sculpturatus (bark scorpion)
cvs Centruroides vittatus (striped bark scorpion)
ptep Parasteatoda tepidariorum (common house spider)
abru Argiope bruennichi (wasp spider)
udv Uloborus diversus
sdm Stegodyphus dumicola
lpol Limulus polyphemus (Atlantic horseshoe crab)
|
other Ecdysozoa
|
pmeo Paramacrobiotus metropolitanus
cel Caenorhabditis elegans (nematode)
cbr Caenorhabditis briggsae (nematode)
crq Caenorhabditis remanei (nematode)
nai Necator americanus (New World hookworm)
bmy Brugia malayi (filaria)
loa Loa loa (eye worm)
tsp Trichinella spiralis
|
other Protostomes
|
hro Helobdella robusta
lgi Lottia gigantea (owl limpet)
pvul Patella vulgata (common limpet)
pcan Pomacea canaliculata (golden apple snail)
lsax Littorina saxatilis
barl Babylonia areolata (ivory shell)
bgt Biomphalaria glabrata (bloodfluke planorb)
gae Gigantopelta aegis (peltospirid snail)
hrf Haliotis rufescens (red abalone)
hrj Haliotis rubra (blacklip abalone)
hasi Haliotis asinina (tropical abalone)
hcra Haliotis cracherodii (black abalone)
crg Magallana gigas (Pacific oyster)
canu Magallana angulata (Portugese oyster)
cvn Crassostrea virginica (eastern oyster)
oed Ostrea edulis (European flat oyster)
myi Mizuhopecten yessoensis (Yesso scallop)
pmax Pecten maximus (king scallop)
airr Argopecten irradians (bay scallop)
yba Ylistrum balloti (Ballot's saucer scallop)
mcaf Mytilus californianus (California mussel)
mmer Mercenaria mercenaria (northern quahog)
rphi Ruditapes philippinarum (Manila clam)
dpol Dreissena polymorpha (zebra mussel)
maea Mya arenaria (softshell)
obi Octopus bimaculoides (California two-spot octopus)
osn Octopus sinensis (East Asian common octopus)
ljp Liolophura japonica (common chiton)
lak Lingula anatina
smm Schistosoma mansoni
shx Schistosoma haematobium (urinary blood fluke)
ovi Opisthorchis viverrini (Southeast Asian liver fluke)
egl Echinococcus granulosus (hydatid tapeworm)
llon Lineus longissimus (bootlace worm)
wsb Watersipora subatra (red ripple bryozoan)
|
other Eumetazoa
|
nve Nematostella vectensis (starlet sea anemone)
epa Exaiptasia diaphana (Aiptasia)
aten Actinia tenebrosa (Australian red waratah sea anemone)
adf Acropora digitifera (stony coral)
amil Acropora millepora
amua Acropora muricata (staghorn coral)
mcaz Montipora capricornis (leaf plate montipora)
mfoo Montipora foliosa
pdam Pocillopora damicornis (lace coral)
spis Stylophora pistillata (Smooth Cauliflower Coral)
dgt Dendronephthya gigantea (soft corals)
xen Xenia sp. Carnegie-2017 (soft corals)
hmg Hydra vulgaris (swiftwater hydra)
hsy Hydractinia symbiolongicarpus
res Rhopilema esculentum
tad Trichoplax adhaerens (placozoan)
|
other Metazoa
|
aqu Amphimedon queenslandica (sponge)
cclm Corticium candelabrum
|
Plants
|
Monocots
|
osa Oryza sativa japonica (Japanese rice)
dosa Oryza sativa japonica (Japanese rice) (RAPDB)
obr Oryza brachyantha (malo sina)
ogl Oryza glaberrima (African rice)
bdi Brachypodium distachyon (stiff brome)
ats Aegilops tauschii (wheat D)
tdc Triticum dicoccoides (wild emmer wheat)
taes Triticum aestivum (bread wheat)
tua Triticum urartu (red wild einkorn wheat)
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
lper Lolium perenne (perennial ryegrass)
lrd Lolium rigidum (rigid ryegrass)
sbi Sorghum bicolor (sorghum)
zma Zea mays (maize)
mflo Miscanthus floridulus
sita Setaria italica (foxtail millet)
svs Setaria viridis (green foxtail)
pvir Panicum virgatum (switchgrass)
phai Panicum hallii (Hall's panicgrass)
paua Phragmites australis (common reed)
tang Typha angustifolia (narrow-leaf cattail)
crot Carex rostrata (bottle sedge)
pda Phoenix dactylifera (date palm)
egu Elaeis guineensis (African oil palm)
mus Musa acuminata (dessert banana)
zof Zingiber officinale (ginger)
dct Dendrobium catenatum
peq Phalaenopsis equestris
aof Asparagus officinalis (garden asparagus)
wau Wolffia australiana
|
Eudicots
|
ath Arabidopsis thaliana (thale cress)
aly Arabidopsis lyrata (lyrate rockcress)
crb Capsella rubella (pink shepherd's-purse)
csat Camelina sativa (false flax)
eus Eutrema salsugineum (saltwater cress)
brp Brassica rapa (field mustard)
bna Brassica napus (rape)
boe Brassica oleracea (wild cabbage)
rsz Raphanus sativus (radish)
thj Tarenaya hassleriana (spider flower)
cpap Carica papaya (papaya)
cit Citrus sinensis (Valencia orange)
cic Citrus x clementina (clementine)
pvy Pistacia vera (pistachio)
minc Mangifera indica (mango)
tcc Theobroma cacao (cacao)
gra Gossypium raimondii
ghi Gossypium hirsutum (upland cotton)
gab Gossypium arboreum (tree cotton)
hsyr Hibiscus syriacus (Rose-of-Sharon)
dzi Durio zibethinus (durian)
egr Eucalyptus grandis (rose gum)
rarg Rhodamnia argentea (silver malletwood)
gmx Glycine max (soybean)
gsj Glycine soja (wild soybean)
pvu Phaseolus vulgaris (common bean)
vra Vigna radiata (mung bean)
var Vigna angularis (adzuki bean)
vun Vigna unguiculata (cowpea)
vum Vigna umbellata (ricebean)
ccaj Cajanus cajan (pigeon pea)
aprc Abrus precatorius (Indian licorice)
mtr Medicago truncatula (barrel medic)
tpra Trifolium pratense (red clover)
cam Cicer arietinum (chickpea)
psat Lathyrus oleraceus (garden pea)
vvo Vicia villosa (hairy vetch)
lja Lotus japonicus
adu Arachis duranensis
aip Arachis ipaensis
ahf Arachis hypogaea (peanut)
lang Lupinus angustifolius (narrow-leaved blue lupine)
pcin Prosopis cineraria
qsa Quillaja saponaria (soapbark tree)
fve Fragaria vesca (woodland strawberry)
aans Argentina anserina (silverweed cinquefoil)
rcn Rosa chinensis (China rose)
pper Prunus persica (peach)
pmum Prunus mume (Japanese apricot)
pavi Prunus avium (sweet cherry)
pdul Prunus dulcis (almond)
mdm Malus domestica (apple)
msyl Malus sylvestris (European crab apple)
pxb Pyrus x bretschneideri (Chinese white pear)
pcox Pyrus communis (pear)
zju Ziziphus jujuba (Chinese jujube)
mnt Morus notabilis
csav Cannabis sativa (hemp)
hlp Humulus lupulus (common hop)
csv Cucumis sativus (cucumber)
cmo Cucumis melo (muskmelon)
bhj Benincasa hispida (wax gourd)
mcha Momordica charantia (bitter melon)
cmax Cucurbita maxima (winter squash)
cmos Cucurbita moschata (crookneck pumpkin)
cpep Cucurbita pepo subsp. pepo (vegetable marrow)
rcu Ricinus communis (castor bean)
mean Mercurialis annua (annual mercury)
jcu Jatropha curcas (Barbados nut)
hbr Hevea brasiliensis (rubber tree)
mesc Manihot esculenta (cassava)
pop Populus trichocarpa (black cottonwood)
peu Populus euphratica (Euphrates poplar)
palz Populus alba (white poplar)
pnz Populus nigra (Lombardy poplar)
jre Juglans regia (English walnut)
cill Carya illinoinensis (pecan)
cave Corylus avellana (European hazelnut)
aglu Alnus glutinosa (common alder)
qsu Quercus suber (cork oak)
qlo Quercus lobata (valley oak)
csaa Castanea sativa (European chestnut)
twl Tripterygium wilfordii (thunder duke vine)
vvi Vitis vinifera (wine grape)
vri Vitis riparia (riverbank grape)
sly Solanum lycopersicum (tomato)
spen Solanum pennellii
sot Solanum tuberosum (potato)
sstn Solanum stenotomum
sdul Solanum dulcamara (climbing nightshade)
sver Solanum verrucosum
cann Capsicum annuum (peppers)
lbb Lycium barbarum (goji berry)
nta Nicotiana tabacum (common tobacco)
nsy Nicotiana sylvestris (wood tobacco)
nto Nicotiana tomentosiformis
nau Nicotiana attenuata (coyote tobacco)
ini Ipomoea nil (Japanese morning glory)
itr Ipomoea triloba (trilobed morning glory)
sind Sesamum indicum (sesame)
oeu Olea europaea var. sylvestris (wild olive)
egt Erythranthe guttata (spotted monkey flower)
sspl Salvia splendens (scarlet sage)
smil Salvia miltiorrhiza (redroot sage)
shis Salvia hispanica (chia)
apan Andrographis paniculata
hpum Henckelia pumila
phua Primulina huaijiensis
pebu Primulina eburnea
ptab Primulina tabacum
carb Coffea arabica (coffee)
han Helianthus annuus (common sunflower)
bhw Bidens hawaiensis
ecad Erigeron canadensis (horseweed)
lsv Lactuca sativa (garden lettuce)
ccav Cynara cardunculus var. scolymus (artichoke)
dcr Daucus carota (carrot)
agrv Apium graveolens (celery)
csin Camellia sinensis (tea plant)
rvl Rhododendron vialii
aew Actinidia eriantha (wild kiwifruit)
dlt Diospyros lotus (date-plum)
cflo Cornus florida (flowering dogwood)
bvg Beta vulgaris (sugar beet)
soe Spinacia oleracea (spinach)
cqi Chenopodium quinoa (quinoa)
atri Amaranthus tricolor (tampala)
slaf Silene latifolia (white campion)
mof Malania oleifera
nnu Nelumbo nucifera (sacred lotus)
ming Macadamia integrifolia (macadamia nut)
tss Telopea speciosissima (New South Wales waratah)
psom Papaver somniferum (opium poppy)
|
other Flowering plants
|
msin Magnolia sinica
acak Aristolochia californica
ncol Nymphaea colorata (blue-petal water lily)
atr Amborella trichopoda
|
other Seed plants
|
cjf Cryptomeria japonica (Japanese cedar)
|
other Vascular plants
|
smo Selaginella moellendorffii
|
Non-vascular plants
|
ppp Physcomitrium patens (spreading earthmoss)
|
Green algae
|
cre Chlamydomonas reinhardtii
vcn Volvox carteri f. nagariensis
mng Monoraphidium neglectum
csl Coccomyxa subellipsoidea
cvr Chlorella variabilis
apro Auxenochlorella protothecoides
olu Ostreococcus lucimarinus
ota Ostreococcus tauri
bpg Bathycoccus prasinos
mis Micromonas commoda
mpp Micromonas pusilla
|
Red algae
|
cme Cyanidioschyzon merolae
gsl Galdieria sulphuraria
ccp Chondrus crispus (carragheen)
|
Fungi
|
Ascomycetes
|
sce Saccharomyces cerevisiae (budding yeast)
seub Saccharomyces eubayanus
spao Saccharomyces paradoxus
ago Eremothecium gossypii
erc Eremothecium cymbalariae
kla Kluyveromyces lactis
kmx Kluyveromyces marxianus
lth Lachancea thermotolerans
vpo Vanderwaltozyma polyspora
zro Zygosaccharomyces rouxii
cgr Nakaseomyces glabratus
ncs Naumovozyma castellii
ndi Naumovozyma dairenensis
tpf Tetrapisispora phaffii
tbl Henningerozyma blattae
tgb Torulaspora globosa
tdl Torulaspora delbrueckii
kaf Kazachstania africana
kng Huiozyma naganishii
zmk Zygotorulaspora mrakii
slud Saccharomycodes ludwigii
dha Debaryomyces hansenii
pic Scheffersomyces stipitis
pgu Meyerozyma guilliermondii
spaa Spathaspora passalidarum
lel Lodderomyces elongisporus
lbg Lodderomyces beijingensis
cot Lodderomyces orthopsilosis
cal Candida albicans
ctp Candida tropicalis
cdu Candida dubliniensis
cten Yamadazyma tenuis
clu Clavispora lusitaniae ATCC 42720
clus Clavispora lusitaniae CBS 6936
caur Candidozyma auris
asau Australozyma saopauloensis
ppa Komagataella phaffii
pkz Pichia kudriavzevii
bnn Brettanomyces nanus
bbrx Brettanomyces bruxellensis
opa Ogataea parapolymorpha
yli Yarrowia lipolytica
slb Sugiyamaella lignohabitans
ncr Neurospora crassa
nte Neurospora tetrasperma
smp Sordaria macrospora
pan Podospora anserina
pbel Podospora bellae-mahoneyi
ppsd Podospora pseudocomata
ppsp Podospora pseudopauciseta
ppsa Podospora pseudoanserina
ttt Thermothielavioides terrestris
mtm Thermothelomyces thermophilus
cthr Thermochaetoides thermophila
rthe Remersonia thermophila
mgr Pyricularia oryzae
ppei Pyricularia pennisetigena
pgri Pyricularia grisea
tmn Phaeoacremonium minimum
ssck Sporothrix schenckii
fgr Fusarium graminearum
fpu Fusarium pseudograminearum
fpoa Fusarium poae
fvn Fusarium venenatum
fvr Fusarium verticillioides
fox Fusarium oxysporum
nhe Fusarium vanettenii
ffc Fusarium falciforme
fkr Fusarium keratoplasticum
fmu Fusarium musae
tre Trichoderma reesei QM6a
trr Trichoderma reesei RUT C-30
tatv Trichoderma atroviride
tasp Trichoderma asperellum
maw Metarhizium acridum
maj Metarhizium robertsii
mbrn Metarhizium brunneum
pchm Pochonia chlamydosporia
uvi Ustilaginoidea virens
cmt Cordyceps militaris
amus Akanthomyces muscarius
plj Purpureocillium lilacinum
ptkz Purpureocillium takamizusanense
dcon Drechmeria coniospora
val Verticillium alfalfae
vda Verticillium dahliae
cfj Colletotrichum fioriniae
clup Colletotrichum lupini
chig Colletotrichum higginsianum
cdet Colletotrichum destructivum
sapo Scedosporium apiospermum
ela Eutypa lata
pfy Pestalotiopsis fici
ssl Sclerotinia sclerotiorum
bfu Botrytis cinerea (gray mold)
mbe Drepanopeziza brunnea
psco Mollisia scopiformis
glz Glarea lozoyensis
ani Aspergillus nidulans
afm Aspergillus fumigatus
act Aspergillus clavatus
nfi Aspergillus fischeri
aor Aspergillus oryzae
ang Aspergillus niger (black aspergilli)
afv Aspergillus flavus
aluc Aspergillus luchuensis
ache Aspergillus chevalieri
apuu Aspergillus puulaauensis
pcs Penicillium rubens
pdp Penicillium digitatum
pou Penicillium oxalicum
ppsf Penicillium psychrofluorescens
tmf Talaromyces marneffei
trg Talaromyces rugulosus
cim Coccidioides immitis
cpw Coccidioides posadasii
ure Uncinocarpus reesii
abe Trichophyton benhamiae
tve Trichophyton verrucosum
pbl Paracoccidioides lutzii Pb01
pbn Paracoccidioides brasiliensis
aje Histoplasma mississippiense
bgh Blastomyces gilchristii
pno Parastagonospora nodorum
pte Pyrenophora teres
ptrr Pyrenophora tritici-repentis
bze Bipolaris zeicola
bsc Bipolaris sorokiniana
bor Bipolaris oryzae
aalt Alternaria alternata
adac Alternaria dauci
arab Ascochyta rabiei
ztr Zymoseptoria tritici
pfj Pseudocercospora fijiensis
ffu Fulvia fulva
cbet Cercospora beticola
bcom Baudoinia panamericana
npa Neofusicoccum parvum
tml Tuber melanosporum
spo Schizosaccharomyces pombe (fission yeast)
som Schizosaccharomyces osmophilus (fission yeast)
|
Basidiomycetes
|
cne Cryptococcus deneoformans JEC21
cnb Cryptococcus deneoformans B-3501A
cng Cryptococcus neoformans var. grubii H99
cgi Cryptococcus gattii
cdeu Cryptococcus deuterogattii
cdec Cryptococcus decagattii
cteg Cryptococcus tetragattii
cbas Cryptococcus bacillisporus
cdep Cryptococcus depauperatus
kmg Kwoniella mangroviensis
kne Kwoniella newhampshirensis
kdj Kwoniella dejecticola
kbi Kwoniella bestiolae
kpin Kwoniella pini
ksh Kwoniella shivajii
ker Kwoniella europaea
ksn Kwoniella shandongensis
kbo Kwoniella botswanensis
kep Kwoniella dendrophila
tms Tremella mesenterica
tasa Trichosporon asahii var. asahii
ccac Cutaneotrichosporon cavernicola
ppl Postia placenta
tvs Trametes versicolor
dsq Dichomitus squalens
pco Phanerochaete carnosa
shs Stereum hirsutum
hir Heterobasidion irregulare
psq Punctularia strigosozonata
adl Auricularia subglabra
fme Fomitiporia mediterranea
gtr Gloeophyllum trabeum
rsx Rhizoctonia solani
lbc Laccaria bicolor
cci Coprinopsis cinerea (gray shag)
abp Agaricus bisporus var. burnettii JB137-S8
abv Agaricus bisporus var. bisporus H97
pcub Psilocybe cubensis (magic mushroom)
mpr Moniliophthora perniciosa
mrr Moniliophthora roreri
more Marasmius oreades (fairy-ring mushroom)
scm Schizophyllum commune
cput Coniophora puteana
sla Serpula lacrymans
wse Wallemia mellicola
wic Wallemia ichthyophaga
uma Mycosarcoma maydis
pfp Pseudozyma flocculosa
sgra Sporisorium graminicola
mgl Malassezia globosa
mrt Malassezia restricta
msym Malassezia sympodialis
mjp Malassezia japonica
mves Malassezia vespertilionis
pgr Puccinia graminis
ptrc Puccinia triticina (wheat leaf rust)
pstr Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
mlr Melampsora larici-populina
|
Fungi incertae sedis
|
ecu Encephalitozoon cuniculi
ein Encephalitozoon intestinalis
ehe Encephalitozoon hellem
ero Encephalitozoon romaleae
nce Vairimorpha ceranae
vnx Vairimorpha necatrix
rie Rhizophagus irregularis
|
Protists
|
other Opisthokonta
|
mbr Monosiga brevicollis
sre Salpingoeca rosetta
|
Amoebozoa
|
ddi Dictyostelium discoideum (cellular slime mold)
dpp Dictyostelium purpureum (cellular slime mold)
dfa Cavenderia fasciculata (cellular slime mold)
ehi Entamoeba histolytica
edi Entamoeba dispar
eiv Entamoeba invadens
acan Acanthamoeba castellanii
|
Alveolates
|
pfa Plasmodium falciparum 3D7
pfd Plasmodium falciparum Dd2
pfh Plasmodium falciparum HB3
prei Plasmodium reichenowi
pgab Plasmodium gaboni
plag Plasmodium adleri
pyo Plasmodium yoelii
pcb Plasmodium chabaudi
pbe Plasmodium berghei
pvv Plasmodium vinckei vinckei
pkn Plasmodium knowlesi
pvx Plasmodium vivax
pcy Plasmodium cynomolgi
pmal Plasmodium malariae
pbrs Plasmodium brasilianum
prel Plasmodium relictum
pcot Plasmodium coatneyi
tan Theileria annulata
tpv Theileria parva
tot Theileria orientalis
beq Theileria equi
bbo Babesia bovis
bmic Babesia microti
bbig Babesia bigemina
cpv Cryptosporidium parvum
cho Cryptosporidium hominis
tgo Toxoplasma gondii
bbes Besnoitia besnoiti
tet Tetrahymena thermophila
ptm Paramecium tetraurelia
|
Stramenopiles
|
pti Phaeodactylum tricornutum
fcy Fragilariopsis cylindrus
tps Thalassiosira pseudonana
ngd Nannochloropsis gaditana
aaf Aureococcus anophagefferens
pif Phytophthora infestans
psoj Phytophthora sojae
blac Bremia lactucae (lettuce downy mildew)
spar Saprolegnia parasitica
|
Euglenozoa
|
tbr Trypanosoma brucei brucei
tbg Trypanosoma brucei gambiense
tcr Trypanosoma cruzi
lma Leishmania major
lif Leishmania infantum
ldo Leishmania donovani
lmi Leishmania mexicana
lmat Leishmania martiniquensis
lbz Leishmania braziliensis
lpan Leishmania panamensis
loi Leishmania orientalis
leis Leishmania sp. Ghana 2012 LV757
lenr Leishmania enriettii
lein Leishmania sp. Namibia
phet Porcisia hertigi
|
Heterolobosea
|
ngr Naegleria gruberi
|
Metamonada
|
tva Trichomonas vaginalis
gla Giardia lamblia
ssao Spironucleus salmonicida
|
other Eukaryota
|
ehx Emiliania huxleyi
gtt Guillardia theta
|
Bacteria
|
Enterobacteria
|
kin Phytobacter ursingii
pdz Phytobacter diazotrophicus
mety Phytobacter sp. MRY16-398
ebc Enterobacteriaceae bacterium ENNIH2
|
other Gammaproteobacteria
|
sml Stenotrophomonas maltophilia K279a
smt Stenotrophomonas maltophilia R551-3
buj Stenotrophomonas maltophilia JV3
smz Stenotrophomonas maltophilia D457
sfoe Stenotrophomonas forensis
spaq Stenotrophomonas pavanii
sacz Stenotrophomonas acidaminiphila
stek Stenotrophomonas sp. KCTC 12332
srh Stenotrophomonas rhizophila
slm Stenotrophomonas sp. LM091
sten Stenotrophomonas sp. WZN-1
stem Stenotrophomonas sp. MYb57
stes Stenotrophomonas oleivorans
sinc Stenotrophomonas indicatrix
sgen Stenotrophomonas geniculata
scyc Stenotrophomonas cyclobalanopsidis
stej Stenotrophomonas sp. SBJS02
steo Stenotrophomonas sp. Pemsol
stez Stenotrophomonas sp. P2112
slab Stenotrophomonas lactitubi
lab Lysobacter antibioticus 76
laq Lysobacter antibioticus ATCC 29479
lcp Lysobacter capsici
lgu Lysobacter gummosus
lez Lysobacter enzymogenes C3
lem Lysobacter enzymogenes M497-1
lya Lysobacter yananisis
aber Acinetobacter bereziniae
sbm Shewanella baltica OS185
sbn Shewanella baltica OS195
sbp Shewanella baltica OS223
sbt Shewanella baltica OS678
mhyd Microbulbifer hydrolyticus
mbur Methylotuvimicrobium buryatense
nax Aquisalimonas sp. 2447
seds Sedimenticola thiotaurini
hak Halomonas sp. KO116
hsi Halomonas aestuarii
halo Halomonas sp. 1513
hag Halomonas sp. GFAJ-1
hpiz Vreelandella piezotolerans
eei Endozoicomonas euniceicola
emp Endozoicomonas montiporae
|
Betaproteobacteria
|
bur Burkholderia lata
bcj Burkholderia cenocepacia J2315
bceo Burkholderia cenocepacia H111
bced Burkholderia cepacia DDS 7H-2
bsem Burkholderia seminalis
bstl Burkholderia stabilis
bari Burkholderia arboris
baen Burkholderia aenigmatica
burm Burkholderia sp. MS389
ctt Comamonas thiooxydans
ctes Comamonas testosteroni TK102
dih Diaphorobacter sp. HDW4A
hse Herbaspirillum seropedicae SmR1
hsz Herbaspirillum seropedicae Z67
bbay Burkholderiales bacterium YL45
|
Alphaproteobacteria
|
wpi Wolbachia endosymbiont of Culex quinquefasciatus Pel
tec Thioclava electrotropha
slut Sphingomonas lutea
spap Sphingomonas alpina
|
Thermodesulfobacteriota
|
dli Desulfonema limicola
dmm Desulfonema magnum
dti Desulfomonile tiedjei
sfu Syntrophobacter fumaroxidans
dax Desulfoglaeba alkanexedens
|
Myxococcota
|
age Archangium gephyra
|
Verrucomicrobiota
|
vbs Verrucomicrobia bacterium S94
|
Planctomycetota
|
bvo Bremerella volcania
gpn Gimesia panareensis
ges Gemmata sp. SH-PL17
ftj Frigoriglobus tundricola
kst Kuenenia stuttgartensis
pbu Sedimentisphaera cyanobacteriorum L21-RPul-D3
pbp Sedimentisphaera salicampi
pbas Limihaloglobus sulfuriphilus
|
Kiritimatiellota
|
taer Tichowtungia aerotolerans
|
Lentisphaerota
|
lbv Lentisphaerota bacterium zth2
lbac Lentisphaerae bacterium WC36
|
Spirochaetota
|
sfc Spirochaeta africana
sper Thiospirochaeta perfilievii
slr Salinispira pacifica
ock Oceanispirochaeta crateris
ecul Entomospira culicis
enem Entomospira nematocerorum
eet Entomospira entomophila
sbu Sphaerochaeta globosa
sgp Sphaerochaeta pleomorpha
sass Sphaerochaeta associata
tbe Treponema brennaborense
bhy Brachyspira hyodysenteriae WA1
bhd Brachyspira hyodysenteriae ATCC 27164
bhyb Brachyspira hyodysenteriae B204
bhyj Brachyspira hyodysenteriae JR80
brm Brachyspira murdochii
bpo Brachyspira pilosicoli 95/1000
bpj Brachyspira pilosicoli B2904
bpip Brachyspira pilosicoli P43/6/78
bpw Brachyspira pilosicoli WesB
bip Brachyspira intermedia
bhp Brachyspira hampsonii
|
Acidobacteriota
|
ctm Chloracidobacterium thermophilum
cvl Chloracidobacterium validum
chlo Chloracidobacterium sp. MS 40/45
|
Bacteroidota
|
bxy Bacteroides xylanisolvens
pgi Porphyromonas gingivalis W83
pgn Porphyromonas gingivalis ATCC 33277
pgt Porphyromonas gingivalis TDC60
asx Alkalitalea saponilacus
mup Mucilaginibacter sp. PAMC 26640
muc Mucilaginibacter xinganensis
muh Mucilaginibacter celer
mrub Mucilaginibacter rubeus
cmr Cyclobacterium marinum
sli Spirosoma linguale
srd Spirosoma radiotolerans
spib Spirosoma aureum
stae Spirosoma taeanense
|
Chlorobiota
|
cts Chloroherpeton thalassium
|
Nitrospinota
|
nli Nitronauta litoralis
|
Bacilli
|
axl Amphibacillus xylanus
lsp Lysinibacillus sphaericus
lfu Lysinibacillus fusiformis
lys Lysinibacillus sp. YS11
lyb Lysinibacillus sp. B2A1
lpak Lysinibacillus pakistanensis
saub Staphylococcus aureus 08BA02176 (LA-MRSA)
bbe Brevibacillus brevis
bfm Brevibacillus formosus
gym Paenibacillus sp. Y412MC10
pms Paenibacillus mucilaginosus KNP414
pmq Paenibacillus mucilaginosus 3016
pmw Paenibacillus mucilaginosus K02
pbd Paenibacillus borealis
pgm Paenibacillus graminis
paen Paenibacillus sp. FSL P4-0081
paeq Paenibacillus sp. FSL R5-0912
paea Paenibacillus sp. FSL R7-0273
paee Paenibacillus sp. FSL R7-0331
paeh Paenibacillus sp. FSL H7-0357
pri Paenibacillus riograndensis
pson Paenibacillus sonchi
pow Paenibacillus sp. 32O-W
pxl Paenibacillus xylanexedens
pib Paenibacillus ihbetae
plw Paenibacillus lautus
plut Paenibacillus lutimineralis
pchi Paenibacillus chitinolyticus
pbac Paenibacillus barcinonensis
ptri Paenibacillus tritici
saca Saccharibacillus brassicae
rst Rummeliibacillus stabekisii
keb Kroppenstedtia eburnea
spa Streptococcus pyogenes MGAS10394 (serotype M6)
aur Aerococcus sp. Group 1
aun Aerococcus urinae
aui Aerococcus urinaeequi
asan Aerococcus sanguinicola
avs Aerococcus viridans
auh Aerococcus urinaehominis
aloy Aerococcus loyolae
amit Aerococcus mictus
atj Aerococcus tenax
abae Suicoccus acidiformans
iru Ignavigranum ruoffiae
gsg Globicatella sanguinis
fct Fundicoccus culcitae
fhm Facklamia hominis
rtf Ruoffia tabacinasalis
tlj Tuanshanicoccus lijuaniae
tya Tuanshanicoccus yangjingiae
carn Carnobacterium sp. PL17GRE32
marr Marinilactibacillus sp. 15R
jep Jeotgalibaca sp. PTS2502
jda Jeotgalibaca dankookensis
jeh Jeotgalibaca ciconiae
jar Jeotgalibaca arthritidis
jpo Jeotgalibaca porci
alkf Alkalibacterium sp. f15
|
Clostridia
|
ctc Clostridium tetani E88
ctet Clostridium tetani 12124569
cbo Clostridium botulinum A ATCC 3502
cba Clostridium botulinum A ATCC 19397
cbh Clostridium botulinum A Hall
cby Clostridium botulinum A2
cbl Clostridium botulinum A3 Loch Maree
cbb Clostridium botulinum B1 Okra
cbi Clostridium botulinum Ba4
cbf Clostridium botulinum F Langeland
cbm Clostridium botulinum F 230613
cbj Clostridium botulinum H04402 065
cld Clostridium sporogenes
cchv Clostridium chauvoei
carg Clostridium argentinense
cia Clostridium isatidis
csep Clostridium septicum
ccaa Clostridium cadaveris
ctag Clostridium tagluense
cint Clostridium intestinale
cthd Clostridium thermosuccinogenes
ccak Clostridium caseinilyticum
hhw Hathewaya histolytica
crs Crassaminicella thermophila
cprf Crassaminicella profunda
cras Crassaminicella indica
ocw Oceanirhabdus sp. W0125-5
proq Anaerococcoides asporogena
clo Mageeibacillus indolicus
fsa Fastidiosipila sanguinis
ral Hominimerdicola alba
rus Ruminococcus bicirculans
rgv Ruminococcus gauvreauii
fah Faecalibacterium wellingii
petr Petroclostridium sp. X23
palm Paludihabitans sp. MB14-C6
aim Amygdalobacter indicium
bie Bengtsoniella intestinalis
oko Owariibacterium komagatae
agat Agathobaculum sp. NTUH-O15-33
int Intestinibacillus sp. NTUH-41-i26
alka Alkalibacter rhizosphaerae
acae Alkalicella caledoniensis
fms Fenollaria massiliensis
prom Proteiniborus sp. MB09-C3
bpen Bacteroides pectinophilus
cth Acetivibrio thermocellus ATCC 27405
ctx Acetivibrio thermocellus DSM 1313
ccl Acetivibrio clariflavus
coo Coprococcus sp. ART55/1
cev Coprococcus eutactus
rob Blautia obeum
cpy Lachnoclostridium phytofermentans
csh Clostridium saccharolyticum WM1
acel Anaerocolumna cellulosilytica
eel Eubacterium eligens
rto Ruminococcus torques
rgn Mediterraneibacter gnavus
cbol Enterocloster bolteae
casp Clostridium asparagiforme
dlo Dorea longicatena
wcp Wujia chipingensis
ssun Simiaoa sunii
whj Wansuia hejianensis
kib Kineothrix sp. MB12-C1
hhj Hungatella hathewayi
lbx Lachnospiraceae bacterium KM106-2
anv Anaerotignum sp. MB30-C6
cle Cellulosilyticum lentocellum
cew Cellulosilyticum sp. WCF-2
cbar Petrocella atlantisensis
vgu Vallitalea guaymasensis
vpy Vallitalea pronyensis
amt Alkaliphilus metalliredigens
aoe Alkaliphilus oremlandii
cace Andreesenella acetica
cfm Andreesenella formicacetica
gfe Geosporobacter ferrireducens
cdf Clostridioides difficile 630
pdc Clostridioides difficile 630
cdc Clostridioides difficile CD196
cdl Clostridioides difficile R20291
pdf Clostridioides difficile 630Derm
ril Romboutsia ilealis
rhom Romboutsia hominis
phx Peptacetobacter hiranonis
tem Terrisporobacter hibernicus
tgc Terrisporobacter glycolicus
tmy Terrisporobacter mayombei
tpet Terrisporobacter petrolearius
tvt Terrisporobacter vanillatitrophus
teb Tepidibacter aestuarii
thyr Tepidibacter hydrothermalis
peb Peptostreptococcus equinus
pbq Peptostreptococcaceae bacterium oral taxon 929
eac Peptoclostridium acidaminophilum
cst Acetoanaerobium sticklandii
anot Acetoanaerobium noterae
nth Natranaerobius thermophilus
ncd Natranaerofaba carboxydovora
has Halanaerobium hydrogeniformans
hpk Halanaerobium praevalens
hals Halocella sp. SP3-1
ifn Iocasia frigidifontis
aar Acetohalobium arabaticum
|
other Bacillota
|
fma Finegoldia magna
apr Anaerococcus prevotii
avg Anaerococcus vaginalis
aob Anaerococcus obesiensis
anz Anaerococcus sp. AH8042_DFU013_CI05
amei Peptoniphilus sp. GNH
mhap Miniphocaeibacter halophilus
hov Helcococcus ovis
hku Helcococcus kunzii
gbx Kamagatella elastica
tis Tissierella sp. Yu-01
tiz Tissierella sp. MB52-C2
spok Sporanaerobacter sp. UW_FK_SPOR1_1
sedz Sedimentibacter sp. zth1
ecou Ezakiella coagulans
ers Erysipelothrix rhusiopathiae SY1027
erl Erysipelothrix larvae
erd Erysipelothrix sp. HDW6C
eio Erysipelothrix inopinata
eeh Erysipelothrix enhydrae
euc Faecalitalea cylindroides
fro Faecalibaculum rodentium
aarg Amedibacterium intestinale JCM 30884
absi Amedibacterium intestinale 9CBEGH2
amuo Allobaculum mucilyticum
smoe Solobacterium moorei
tur Turicibacter sp. H121
tsg Turicibacter sanguinis
tbb Turicibacter bilis
tfc Turicibacter faecis
tuk Turicibacter sp. KK003
calk Contubernalis alkaliaceticus
|
Mycoplasmatota
|
mans Mycoplasma anserisalpingitidis
mstr Mycoplasma struthionis
mphe Mycoplasma phocoenae
hcr Hepatoplasma crinochetorum
acl Acholeplasma laidlawii
aoc Acholeplasma oculi
ahk Acholeplasma hippikon
abra Acholeplasma brassicae
aaxa Haploplasma axanthum
manr Mariniplasma anaerobium
xcl Xianfuyuplasma coldseepsis
mbj Izimoplasma sp. HR1
tbk Hujiaoplasma nucleasis
mani Mycoplasmopsis anatis
mclo Metamycoplasma cloacale
mane Mycoplasma anseris
tbm Tenericutes bacterium MO-XQ
tbz Tenericutes bacterium MZ-XQ
|
Actinomycetota
|
mtu Mycobacterium tuberculosis H37Rv
mtv Mycobacterium tuberculosis H37Rv
mtc Mycobacterium tuberculosis CDC1551
mra Mycobacterium tuberculosis H37Ra
mtf Mycobacterium tuberculosis F11
mtb Mycobacterium tuberculosis KZN 1435
mtk Mycobacterium tuberculosis KZN 4207
mtz Mycobacterium tuberculosis KZN 605
mtg Mycobacterium tuberculosis RGTB327
mti Mycobacterium tuberculosis RGTB423
mte Mycobacterium tuberculosis CCDC5079
mtur Mycobacterium tuberculosis CCDC5079
mtl Mycobacterium tuberculosis CCDC5180
mto Mycobacterium tuberculosis CTRI-2
mtd Mycobacterium tuberculosis UT205
mtn Mycobacterium tuberculosis Erdman = ATCC 35801
mtj Mycobacterium tuberculosis Beijing/NITR203
mtub Mycobacterium tuberculosis 7199-99
mtue Mycobacterium tuberculosis EAI5/NITR206
mtx Mycobacterium tuberculosis EAI5
mtuh Mycobacterium tuberculosis Haarlem/NITR202
mtul Mycobacterium tuberculosis Haarlem
mtut Mycobacterium tuberculosis BT1
mtuu Mycobacterium tuberculosis BT2
mtq Mycobacterium tuberculosis HKBS1
mbo Mycobacterium tuberculosis variant bovis AF2122/97
mbb Mycobacterium tuberculosis variant bovis BCG Pasteur 1173P2
mbt Mycobacterium tuberculosis variant bovis BCG Tokyo 172
mbm Mycobacterium tuberculosis variant bovis BCG Mexico
mbk Mycobacterium tuberculosis variant bovis BCG Korea 1168P
maf Mycobacterium tuberculosis variant africanum
mmic Mycobacterium tuberculosis variant microti
mce Mycobacterium canettii CIPT 140010059
mcq Mycobacterium canettii CIPT 140060008
mcv Mycobacterium canettii CIPT 140070008
mcx Mycobacterium canettii CIPT 140070010
mcz Mycobacterium canettii CIPT 140070017
mory Mycobacterium orygis
mpa Mycobacterium avium subsp. paratuberculosis K-10
mao Mycobacterium avium subsp. paratuberculosis MAP4
mavi Mycobacterium avium subsp. paratuberculosis E1
mavu Mycobacterium avium subsp. paratuberculosis E93
mav Mycobacterium avium 104
mavm Mycobacterium avium subsp. avium
mit Mycobacterium intracellulare MOTT-02
mia Mycobacterium intracellulare ATCC 13950
mid Mycobacterium intracellulare subsp. intracellulare
myo Mycobacterium intracellulare subsp. yongonense
mchi Mycobacterium intracellulare subsp. chimaera
mir Mycobacterium paraintracellulare
mmal Mycobacterium marseillense
mlp Mycobacterium lepraemurium
mser Mycobacterium senriense
msa Mycobacterium sp. JS623
mul Mycobacterium ulcerans
mmi Mycobacterium marinum M
mmae Mycobacterium marinum E11
mli Mycobacterium liflandii
mpse Mycobacterium pseudoshottsii
msho Mycobacterium shottsii
mmm Mycobacterium sp. MOTT36Y
mkn Mycobacterium kansasii ATCC 12478
myv Mycobacterium sp. VKM Ac-1817D
mye Mycobacterium sp. EPa45
mhad Mycobacterium haemophilum
mdx Mycobacterium dioxanotrophicus
mshg Mycobacterium shigaense
mfj Mycobacterium florentinum
msto Mycobacterium stomatepiae
msim Mycobacterium simiae
msak Mycobacterium saskatchewanense
mku Mycobacterium kubicae
mlw Mycobacterium lentiflavum
mxe Mycobacterium xenopi
mnv Mycobacterium noviomagense
mpag Mycobacterium paragordonae
mnm Mycobacterium novum
mgor Mycobacterium vicinigordonae
mcoo Mycobacterium cookii
mbai Mycobacterium basiliense
mseo Mycobacterium seoulense
mhek Mycobacterium heckeshornense
mgau Mycobacterium gallinarum
mlj Mycobacterium lacus
mbrd Mycobacterium branderi
mshj Mycobacterium shinjukuense
mmam Mycobacterium malmoense
mspg Mycobacterium spongiae
mot Mycobacterium ostraviense
mpaa Mycobacterium paraterrae
mmeh Mycobacterium methanotrophicum
mky Mycobacterium kiyosense
madi Mycobacterium adipatum
mwu Mycobacterium wuenschmannii
mhaf Mycobacterium hainanense
mva Mycolicibacterium vanbaalenii
maus Mycolicibacterium austroafricanum
mgi Mycolicibacterium gilvum PYR-GCK
msp Mycolicibacterium gilvum Spyr1
mft Mycolicibacterium fortuitum
mphl Mycolicibacterium phlei
mvq Mycolicibacterium vaccae
mll Mycolicibacterium litorale
mrh Mycolicibacterium rhodesiae
mthn Mycolicibacterium thermoresistibile
mhas Mycolicibacterium hassiacum
mdu Mycolicibacterium duvalii
mcht Mycolicibacterium chitae
mdr Mycolicibacterium doricum
mauu Mycolicibacterium aurum
mmor Mycolicibacterium moriokaense
maic Mycolicibacterium aichiense
mij Mycolicibacterium insubricum
malv Mycolicibacterium alvei
mpsc Mycolicibacterium psychrotolerans
mgad Mycolicibacterium gadium
mhev Mycolicibacterium helvum
many Mycolicibacterium anyangense
maub Mycolicibacterium aubagnense
mpof Mycolicibacterium poriferae
mphu Mycolicibacterium phocaicum
mmuc Mycolicibacterium mucogenicum
mmat Mycolicibacterium mageritense
mbok Mycolicibacterium boenickei
mfg Mycolicibacterium farcinogenes
mflv Mycolicibacterium flavescens
mcee Mycolicibacterium celeriflavum
mbrm Mycolicibacterium brumae
mhol Mycolicibacterium holsaticum
msen Mycolicibacterium senegalense
mpae Mycolicibacterium pallens
mrf Mycolicibacterium rufum
mdf Mycolicibacterium diernhoferi
mcro Mycolicibacterium crocinum
mfre Mycolicibacterium frederiksbergense
mbug Mycobacterium burgundiense
mflu Mycolicibacterium fluoranthenivorans
myh Mycolicibacterium sp. HK-90
mpat Mycolicibacterium parafortuitum
mkr Mycolicibacillus koreensis
mpak Mycolicibacillus parakoreensis
mab Mycobacteroides abscessus ATCC 19977
mmv Mycobacteroides abscessus subsp. massiliense GO 06
mabb Mycobacteroides abscessus subsp. bolletii 50594
mabl Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300
mche Mycobacteroides chelonae
miz Mycobacteroides immunogenum
mste Mycobacteroides stephanolepidis
msao Mycobacteroides saopaulense
msal Mycobacteroides salmoniphilum
myy Mycobacteroides sp. PCS013
mjd Mycolicibacter sinensis
mter Mycolicibacter terrae
mmin Mycolicibacter minnesotensis
mhib Mycolicibacter hiberniae
mher Mycolicibacter heraklionensis
mvm Mycolicibacter virginiensis
mkk Mycobacterium kokjensenii
ccys Corynebacterium cystitidis
nsr Nocardia seriolae
ntp Nocardia terpenica
nah Nocardia arthritidis
nie Nocardia iowensis
ntc Nocardia tengchongensis
nya Nocardia yamanashiensis
nyu Nocardia yunnanensis
gami Gordonia amicalis
splu Streptomyces pluripotens
ppc Pseudopropionibacterium propionicum
nal Nocardiopsis alba
actw Actinomadura sp. WMMB 499
kra Kineococcus radiotolerans
kbr Kutzneria buriramensis
atl Actinocatenispora thailandica
pry Polymorphospora rubra
cati Catellatospora sp. IY07-71
pbaj Svornostia abyssi
parn Paraconexibacter antarcticus
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Cyanobacteriota
|
syj Synechocystis sp. PCC 6714
synh Synechocystis sp. PCC 7338
syc Synechococcus elongatus PCC6301
syu Synechococcus elongatus UTEX 2973
syf Synechococcus elongatus PCC 7942 = FACHB-805
cya Synechococcus sp. JA-3-3Ab
cyb Synechococcus sp. JA-2-3B'a(2-13)
syne Synechococcus sp. PCC 6312
cmp Chamaesiphon minutus
tvn Thermostichus vulcanus
tel Thermosynechococcus vestitus
thn Thermosynechococcus sp. NK55
thec Thermosynechococcus sp. CL-1
they Thermosynechococcus sp. TA-1
tsq Thermosynechococcus sichuanensis
amr Acaryochloris marina
acam Acaryochloris sp. 'Moss Beach'
tsz Trichothermofontia sichuanensis
let Leptolyngbya sp. O-77
lepb Leptolyngbya sp. BL0902
lsk Leptothermofonsia sichuanensis
sfri Stenomitos frigidus
hhg Halomicronema hongdechloris
dsl Dactylococcopsis salina
pseu Thalassoporum mexicanum
pgx Pseudanabaena galeata
synp Pseudanabaenococcus habilitatus
theu Thermoleptolyngbya sichuanensis
tog Thermoleptolyngbya oregonensis
tsin Thermocoleostomius sinensis
glp Gloeocapsa sp. PCC 7428
gdu Gloeocapsopsis dulcis
gen Geminocystis sp. NIES-3709
gee Geminocystis sp. NIES-3708
can Cyanobacterium aponinum
csn Cyanobacterium stanieri
cyl Cyanobacterium sp. HL-69
cyr Cyanobacterium sp. IPPAS B-1200
cyd Cyanobacterium sp. DS4
syp Picosynechococcus sp. PCC 7002
syv Picosynechococcus sp. PCC 73109
syl Picosynechococcus sp. PCC 7003
lep Leptolyngbya sp. PCC 7376
synn Synechococcus sp. NIES-970
pip Picosynechococcus sp. PCC 11901
hao Halothece sp. PCC 7418
enn Euhalothece natronophila
ter Trichodesmium erythraeum
mvag Microcoleus vaginatus
lfs Limnospira fusiformis
lix Limnospira indica
arp Limnospira platensis
oxy Oxynema aestuarii
oac Oxynema acuminatum
phor Phormidium sp. PBR-2020
pyh Phormidium yuhuli
oni Oscillatoria nigro-viridis
mpro Moorena producens
gei Geitlerinema sp. PCC 7407
ana Nostoc sp. PCC 7120
nos Nostoc sp. PCC 7107
nop Nostoc sp. PCC 7524
non Nostoc sp. NIES-3756
noe Nostoc sp. CENA543
nsh Nostoc sphaeroides
ned Nostoc edaphicum
ncf Nostoc cf. commune
nosc Nostoc sp. UHCC 0870
ava Trichormus variabilis
ann Anabaena sp. YBS01
nsph Nodularia sphaerocarpa
aee Anabaenopsis elenkinii
calt Calothrix sp. PCC 6303
cals Calothrix sp. NIES-3974
riv Rivularia sp. PCC 7116
fis Fischerella sp. NIES-3754
ocf Okeanomitos corallinicola
scys Kalymmatonema gypsitolerans
cthe Chroococcidiopsis thermalis
scs Stanieria cyanosphaera
stan Stanieria sp. NIES-3757
gcy Gloeomargaritales cyanobacterium VI4D9
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Deinococcota
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tra Truepera radiovictrix
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Synergistota
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amiz Aminobacterium sp. MB27-C1
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Thermotogota
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ocs Oceanotoga sp. DSM 15011
mpg Mesotoga prima
minf Mesotoga infera
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Fusobacteriota
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fva Fusobacterium varium
ful Fusobacterium ulcerans
fmo Fusobacterium mortiferum
fho Fusobacterium hominis
ipo Ilyobacter polytropus
csom Cetobacterium somerae
leo Leptotrichia sp. oral taxon 212
lgo Pseudoleptotrichia goodfellowii
str Sebaldella termitidis
sns Sneathia vaginalis
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Archaea
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Methanobacteriota
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mth Methanothermobacter thermautotrophicus
mmg Methanothermobacter marburgensis
mwo Methanothermobacter wolfeii
mtee Methanothermobacter tenebrarum
metc Methanothermobacter sp. CaT2
mete Methanothermobacter sp. EMTCatA1
metk Methanothermobacter sp. KEPCO-1
mthm Methanothermobacter sp. THM-1
maro Methanobrevibacter arboriphilus
mel Methanobacterium lacus
meth Methanobacterium sp. MB1
mfc Methanobacterium formicicum BRM9
mfi Methanobacterium formicicum DSM1535
msub Methanobacterium subterraneum
metn Methanobacterium sp. MZ-A1
mett Methanobacterium sp. BRmetb2
meto Methanobacterium sp. BAmetb5
meme Methanobacterium alkalithermotolerans
mfeg Methanobacterium ferruginis
meer Methanobacterium sp. ERen5
mvc Methanosarcina vacuolata
msz Methanosarcina siciliae HI350
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Thermoproteota
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sule Saccharolobus sp. E5-1-F
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Promethearchaeota
|
loki Lokiarchaeum sp. GC14_75
lob Lokiarchaeum ossiferum
psyt Promethearchaeum syntrophicum
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