 Reference
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 Reference hierarchy
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Organism specific
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Animals
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Mammals
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hsa Homo sapiens (human)
hsa_disease Homo sapiens (human) + Disease
hsa_drug Homo sapiens (human) + Drug
ptr Pan troglodytes (chimpanzee)
pps Pan paniscus (bonobo)
ggo Gorilla gorilla gorilla (western lowland gorilla)
pon Pongo abelii (Sumatran orangutan)
ppyg Pongo pygmaeus (Bornean orangutan)
nle Nomascus leucogenys (northern white-cheeked gibbon)
hmh Hylobates moloch (silvery gibbon)
ssyn Symphalangus syndactylus (siamang)
mcc Macaca mulatta (rhesus monkey)
mcf Macaca fascicularis (crab-eating macaque)
mthb Macaca thibetana thibetana (Pere David's macaque)
mni Macaca nemestrina (pig-tailed macaque)
csab Chlorocebus sabaeus (green monkey)
caty Cercocebus atys (sooty mangabey)
panu Papio anubis (olive baboon)
tge Theropithecus gelada (gelada)
mleu Mandrillus leucophaeus (drill)
rro Rhinopithecus roxellana (golden snub-nosed monkey)
rbb Rhinopithecus bieti (black snub-nosed monkey)
tfn Trachypithecus francoisi (Francois's langur)
pteh Piliocolobus tephrosceles (Ugandan red Colobus)
cang Colobus angolensis palliatus (Angola colobus)
cjc Callithrix jacchus (white-tufted-ear marmoset)
sbq Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
cimi Cebus imitator (Panamanian white-faced capuchin)
anan Aotus nancymaae (Ma's night monkey)
csyr Carlito syrichta (Philippine tarsier)
mmur Microcebus murinus (gray mouse lemur)
lcat Lemur catta (Ring-tailed lemur)
eruf Eulemur rufifrons (Bennett's brown lemur)
pcoq Propithecus coquereli (Coquerel's sifaka)
oga Otolemur garnettii (small-eared galago)
mmu Mus musculus (house mouse)
mcal Mus caroli (Ryukyu mouse)
mpah Mus pahari (shrew mouse)
rno Rattus norvegicus (rat)
mcoc Mastomys coucha (southern multimammate mouse)
anu Arvicanthis niloticus (African grass rat)
asyl Apodemus sylvaticus (European woodmouse)
mun Meriones unguiculatus (Mongolian gerbil)
cge Cricetulus griseus (Chinese hamster)
maua Mesocricetus auratus (golden hamster)
prob Phodopus roborovskii (desert hamster)
pleu Peromyscus leucopus (white-footed mouse)
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
morg Microtus oregoni (creeping vole)
mfot Alexandromys fortis (reed vole)
aamp Arvicola amphibius (Eurasian water vole)
cnl Chionomys nivalis (European snow vole)
ngi Nannospalax galili (Upper Galilee mountains blind mole rat)
hgl Heterocephalus glaber (naked mole-rat)
cpoc Cavia porcellus (domestic guinea pig)
ccan Castor canadensis (American beaver)
dord Dipodomys ordii (Ord's kangaroo rat)
dsp Dipodomys spectabilis (banner-tailed kangaroo rat)
dmer Dipodomys merriami (Merriam's kangaroo rat)
plop Perognathus longimembris pacificus (Pacific pocket mouse)
ncar Sciurus carolinensis (gray squirrel)
svul Sciurus vulgaris (Eurasian red squirrel)
mmma Marmota marmota marmota (Alpine marmot)
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
ocu Oryctolagus cuniculus (rabbit)
opi Ochotona princeps (American pika)
ocz Ochotona curzoniae (black-lipped pika)
tup Tupaia chinensis (Chinese tree shrew)
gvr Galeopterus variegatus (Sunda flying lemur)
cfa Canis lupus familiaris (dog)
clud Canis lupus dingo (dingo)
vvp Vulpes vulpes (red fox)
vlg Vulpes lagopus (Arctic fox)
npo Nyctereutes procyonoides (raccoon dog)
aml Ailuropoda melanoleuca (giant panda)
umr Ursus maritimus (polar bear)
uah Ursus arctos (brown bear)
uar Ursus americanus (American black bear)
elk Enhydra lutris kenyoni (northern sea otter)
llv Lutra lutra (Eurasian river otter)
mpuf Mustela putorius furo (domestic ferret)
mnp Mustela nigripes (black-footed ferret)
mlk Mustela lutreola (European mink)
nvs Neogale vison (American mink)
oro Odobenus rosmarus divergens (Pacific walrus)
eju Eumetopias jubatus (Steller sea lion)
zca Zalophus californianus (California sea lion)
mlx Mirounga leonina (Southern elephant seal)
mano Mirounga angustirostris (Northern elephant seal)
nsu Neomonachus schauinslandi (Hawaiian monk seal)
lww Leptonychotes weddellii (Weddell seal)
fca Felis catus (domestic cat)
pyu Herpailurus yagouaroundi (jaguarundi)
pcoo Puma concolor (puma)
pbg Prionailurus bengalensis (leopard cat)
pviv Prionailurus viverrinus (fishing cat)
lruf Lynx rufus (bobcat)
lgf Leopardus geoffroyi (Geoffroy's cat)
aju Acinonyx jubatus (cheetah)
ptg Panthera tigris altaica (Amur tiger)
ppad Panthera pardus (leopard)
puc Panthera uncia (snow leopard)
plez Panthera leo (lion)
hhv Hyaena hyaena (striped hyena)
ccru Crocuta crocuta (spotted hyena)
bta Bos taurus (cow)
bom Bos mutus (wild yak)
biu Bos indicus (zebu cattle)
bjv Bos javanicus (banteng)
bbub Bubalus bubalis (water buffalo)
bke Bubalus kerabau (carabao)
bbis Bison bison bison (American bison)
chx Capra hircus (goat)
oas Ovis aries (sheep)
ocan Ovis canadensis (bighorn sheep)
btax Budorcas taxicolor (takin)
csum Capricornis sumatraensis (Sumatran serow)
oda Oryx dammah (scimitar-horned oryx)
ccad Cervus canadensis (wapiti)
mree Muntiacus reevesi (Reeves' muntjac)
ovr Odocoileus virginianus (white-tailed deer)
mbez Moschus berezovskii (Chinese forest musk deer)
ssc Sus scrofa (pig)
cfr Camelus ferus (Wild Bactrian camel)
cbai Camelus bactrianus (Bactrian camel)
cdk Camelus dromedarius (Arabian camel)
vpc Vicugna pacos (alpaca)
bacu Balaenoptera acutorostrata scammoni (minke whale)
bmus Balaenoptera musculus (blue whale)
lve Lipotes vexillifer (Yangtze River dolphin)
oor Orcinus orca (killer whale)
lalb Lagenorhynchus albirostris (white-beaked dolphin)
gmf Globicephala melas (long-finned pilot whale)
ddp Delphinus delphis (saddleback dolphin)
scoo Stenella coeruleoalba (striped dolphin)
dle Delphinapterus leucas (beluga whale)
pcad Physeter macrocephalus (sperm whale)
psiu Phocoena sinus (vaquita)
pphc Phocoena phocoena (harbor porpoise)
nasi Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
ecb Equus caballus (horse)
epz Equus przewalskii (Przewalski's horse)
eai Equus asinus (ass)
myb Myotis brandtii (Brandt's bat)
myd Myotis davidii (David's myotis)
mmyo Myotis myotis (greater mouse-eared bat)
mlf Myotis lucifugus (little brown bat)
mdt Myotis daubentonii (Daubenton's bat)
myum Myotis yumanensis (Yuma myotis)
pkl Pipistrellus kuhlii (Kuhl's pipistrelle)
efus Eptesicus fuscus (big brown bat)
pots Plecotus auritus (brown big-eared bat)
mna Miniopterus natalensis (Natal long-fingered bat)
dro Desmodus rotundus (common vampire bat)
shon Sturnira hondurensis
ajm Artibeus jamaicensis (Jamaican fruit-eating bat)
pdic Phyllostomus discolor (pale spear-nosed bat)
phas Phyllostomus hastatus (greater spear-nosed bat)
mmf Molossus molossus (Pallas's mastiff bat)
ppam Pteronotus mesoamericanus (Parnell's mustached bat)
hai Hipposideros armiger (great roundleaf bat)
rfq Rhinolophus ferrumequinum (greater horseshoe bat)
pale Pteropus alecto (black flying fox)
pgig Pteropus vampyrus (Indian flying fox)
pvp Pteropus vampyrus (large flying fox)
ray Rousettus aegyptiacus (Egyptian rousette)
mjv Manis javanica (Malayan pangolin)
tod Talpa occidentalis (Iberian mole)
sara Sorex araneus (European shrew)
sfum Sorex fumeus (smoky shrew)
setr Suncus etruscus (white-toothed pygmy shrew)
lav Loxodonta africana (African savanna elephant)
tmu Trichechus manatus latirostris (Florida manatee)
etf Echinops telfairi (small Madagascar hedgehog)
dnm Dasypus novemcinctus (nine-banded armadillo)
mdo Monodelphis domestica (gray short-tailed opossum)
gas Gracilinanus agilis (agile gracile opossum)
shr Sarcophilus harrisii (Tasmanian devil)
afz Antechinus flavipes (yellow-footed antechinus)
pcw Phascolarctos cinereus (koala)
tvp Trichosurus vulpecula (common brushtail)
pbrv Petaurus breviceps papuanus (sugar glider)
mlao Macrotis lagotis (bilby)
oaa Ornithorhynchus anatinus (platypus)
tacu Tachyglossus aculeatus (Australian echidna)
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Birds
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gga Gallus gallus (chicken)
pcoc Phasianus colchicus (Ring-necked pheasant)
mgp Meleagris gallopavo (turkey)
cjo Coturnix japonica (Japanese quail)
tpai Tympanuchus pallidicinctus (lesser prairie-chicken)
lmut Lagopus muta (rock ptarmigan)
nmel Numida meleagris (helmeted guineafowl)
apla Anas platyrhynchos (mallard)
aacu Anas acuta (northern pintail)
oja Oxyura jamaicensis (ruddy duck)
acyg Anser cygnoides (swan goose)
cata Cygnus atratus (black swan)
aful Aythya fuligula (tufted duck)
tgu Taeniopygia guttata (zebra finch)
lsr Lonchura striata (white-rumped munia)
vmc Vidua macroura (Pin-tailed whydah)
vcha Vidua chalybeata (village indigobird)
aib Anomalospiza imberbis (cuckoo-finch)
scan Serinus canaria (common canary)
pmoa Passer montanus (Eurasian tree sparrow)
otc Onychostruthus taczanowskii (white-rumped snowfinch)
pruf Pyrgilauda ruficollis (rufous-necked snowfinch)
atrc Agelaius tricolor (tricolored blackbird)
mate Molothrus ater (brown-headed cowbird)
maen Molothrus aeneus (bronzed cowbird)
gfr Geospiza fortis (medium ground-finch)
fab Ficedula albicollis (collared flycatcher)
oma Oenanthe melanoleuca (Eastern black-eared wheatear)
phi Pseudopodoces humilis (Tibetan ground-tit)
pmaj Parus major (Great Tit)
ccae Cyanistes caeruleus (blue tit)
ccw Corvus cornix (hooded crow)
cbrc Corvus brachyrhynchos (American crow)
acoe Aphelocoma coerulescens (scrub jay)
etl Empidonax traillii (willow flycatcher)
zab Zonotrichia albicollis (white-throated sparrow)
zle Zonotrichia leucophrys gambelii (white-crowned sparrow)
achl Acanthisitta chloris (rifleman)
svg Sturnus vulgaris (common starling)
mmea Malurus melanocephalus (red-backed fairy wren)
hrt Hirundo rustica (Barn swallow)
sati Sylvia atricapilla (blackcap)
cfai Chamaea fasciata (wrentit)
ccic Cinclus cinclus (white-throated dipper)
nnt Nestor notabilis (Kea)
shab Strigops habroptila (Kakapo)
pocc Pezoporus occidentalis (night parrot)
fpg Falco peregrinus (peregrine falcon)
fch Falco cherrug (Saker falcon)
frs Falco rusticolus (gyrfalcon)
ccri Cariama cristata (Red-legged seriema)
acun Athene cunicularia (burrowing owl)
anoc Athene noctua (little owl)
sura Strix uralensis (Ural owl)
tala Tyto alba (Barn owl)
achc Aquila chrysaetos chrysaetos (golden eagle)
hald Haliaeetus albicilla (white-tailed eagle)
hle Haliaeetus leucocephalus (bald eagle)
agen Astur gentilis (Northern goshawk)
hhar Harpia harpyja (harpy eagle)
bbut Buteo buteo (common buzzard)
gcl Gymnogyps californianus (California condor)
csti Colius striatus (speckled mousebird)
ldi Leptosomus discolor (cuckoo roller)
mnb Merops nubicus (carmine bee-eater)
dpub Dryobates pubescens (Downy woodpecker)
ppus Pogoniulus pusillus (red-fronted tinkerbird)
iin Indicator indicator (greater honeyguide)
avit Apaloderma vittatum (bar-tailed trogon)
brhi Buceros rhinoceros silvestris (rhinoceros hornbill)
egz Egretta garzetta (little egret)
nni Nipponia nippon (crested ibis)
pcri Pelecanus crispus (Dalmatian pelican)
pcao Phalacrocorax carbo (great cormorant)
parx Phalacrocorax aristotelis (European shag)
padl Pygoscelis adeliae (Adelie penguin)
afor Aptenodytes forsteri (emperor penguin)
fga Fulmarus glacialis (Northern fulmar)
cbor Calonectris borealis (Cory's shearwater)
gste Gavia stellata (red-throated loon)
cboy Ciconia boyciana (Oriental stork)
mame Mycteria americana (wood stork)
clv Columba livia (rock pigeon)
cnic Caloenas nicobarica (Nicobar pigeon)
mui Mesitornis unicolor (brown roatelo)
pguu Pterocles gutturalis (yellow-throated sandgrouse)
plet Phaethon lepturus (White-tailed tropicbird)
ehs Eurypyga helias (sunbittern)
cmac Chlamydotis macqueenii (Macqueen's bustard)
cuca Cuculus canorus (common cuckoo)
pcur Phaenicophaeus curvirostris (chestnut-breasted malkoha)
teo Tauraco erythrolophus (red-crested turaco)
breg Balearica regulorum gibbericeps (East African grey crowned-crane)
game Grus americana (Whooping crane)
oha Opisthocomus hoazin (hoatzin)
acar Antrostomus carolinensis (chuck-will's-widow)
cpea Chaetura pelagica (chimney swift)
cvf Charadrius vociferus (killdeer)
rtd Rissa tridactyla (black-legged kittiwake)
crid Chroicocephalus ridibundus (black-headed gull)
lmic Larus michahellis (yellow-legged gull)
narq Numenius arquata (Eurasian curlew)
aam Apteryx mantelli mantelli (North Island brown kiwi)
arow Apteryx rowi (Okarito brown kiwi)
npd Nothoprocta perdicaria (Chilean tinamou)
tgt Tinamus guttatus (white-throated tinamou)
dne Dromaius novaehollandiae (emu)
scam Struthio camelus australis (South African ostrich)
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Reptiles
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asn Alligator sinensis (Chinese alligator)
amj Alligator mississippiensis (American alligator)
cpoo Crocodylus porosus (Australian saltwater crocodile)
ggn Gavialis gangeticus (Gharial)
pss Pelodiscus sinensis (Chinese soft-shelled turtle)
ciz Carettochelys insculpta (pitted-shelled turtle)
cmy Chelonia mydas (green sea turtle)
ccay Caretta caretta (Loggerhead turtle)
lkp Lepidochelys kempii (Atlantic ridley)
nds Natator depressus (flatback sea turtle)
dcc Dermochelys coriacea (leatherback sea turtle)
cpic Chrysemys picta (western painted turtle)
tst Trachemys scripta elegans (red-eared slider)
eob Emys orbicularis (European pond turtle)
cabi Chelonoidis abingdonii (Abingdon island giant tortoise)
mrv Mauremys reevesii (Reeves's turtle)
emq Emydura macquarii macquarii (eastern short-necked turtle)
acs Anolis carolinensis (green anole)
asao Anolis sagrei ordinatus (Brown anole)
pvt Pogona vitticeps (central bearded dragon)
sund Sceloporus undulatus (fence lizard)
pbi Python bivittatus (Burmese python)
pmur Protobothrops mucrosquamatus (Taiwan habu)
ctig Crotalus tigris (Tiger rattlesnake)
tsr Thamnophis sirtalis (common garter snake)
pgut Pantherophis guttatus (corn snake)
pcae Pituophis catenifer annectens (San Diego gophersnake)
apri Ahaetulla prasina (Asian vine snake)
ptex Pseudonaja textilis (eastern brown snake)
nss Notechis scutatus (mainland tiger snake)
vko Varanus komodoensis (Komodo dragon)
pmua Podarcis muralis (common wall lizard)
praf Podarcis raffonei (Aeolian wall lizard)
zvi Zootoca vivipara (common lizard)
hcg Hemicordylus capensis (graceful crag lizard)
gja Gekko japonicus (Schlegel's Japanese gecko)
stow Sphaerodactylus townsendi (Townsend's least gecko)
emc Eublepharis macularius (Leopard gecko)
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Amphibians
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xla Xenopus laevis (African clawed frog)
xtr Xenopus tropicalis (tropical clawed frog)
npr Nanorana parkeri (Xizang Plateau frog)
rtem Rana temporaria (common frog)
acat Aquarana catesbeiana (American bullfrog)
pads Pyxicephalus adspersus (African bullfrog)
bbuf Bufo bufo (common toad)
bgar Bufo gargarizans (Asiatic toad)
dtc Dendrobates tinctorius (dyeing poison frog)
hsq Hyla sarda (Sardinian treefrog)
pcob Pseudophryne corroboree (corroboree frog)
pwl Pleurodeles waltl (Iberian ribbed newt)
muo Microcaecilia unicolor
gsh Geotrypetes seraphini (Gaboon caecilian)
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Fishes
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dre Danio rerio (zebrafish)
daes Danio aesculapii (panther danio)
srx Sinocyclocheilus rhinocerous
sanh Sinocyclocheilus anshuiensis
sgh Sinocyclocheilus grahami (golden-line barbel)
ccar Cyprinus carpio (common carp)
caua Carassius auratus (goldfish)
cgib Carassius gibelio (silver crucian carp)
ptet Puntigrus tetrazona (Sumatra barb)
lroh Labeo rohita (rohu)
grf Garra rufa (doctor fish)
omc Onychostoma macrolepis
pprm Pimephales promelas (fathead minnow)
rkg Rhinichthys klamathensis goyatoka (western speckled dace)
mamb Megalobrama amblycephala (Wuchang bream)
cide Ctenopharyngodon idella (grass carp)
cery Chanodichthys erythropterus (predatory carp)
masi Myxocyprinus asiaticus (Chinese sucker)
tros Triplophysa rosa
tdw Triplophysa dalaica
manu Misgurnus anguillicaudatus (oriental weatherfish)
pdab Paramisgurnus dabryanus (large-scale loach)
ipu Ictalurus punctatus (channel catfish)
ifu Ictalurus furcatus (blue catfish)
phyp Pangasianodon hypophthalmus (striped catfish)
smeo Silurus meridionalis (southern catfish)
tfd Tachysurus fulvidraco (yellow catfish)
tvc Tachysurus vachellii
cgar Clarias gariepinus (North African catfish)
ngra Neoarius graeffei (lesser salmon catfish)
trn Trichomycterus rosablanca
amex Astyanax mexicanus (Mexican tetra)
cmao Colossoma macropomum (tambaqui)
eee Electrophorus electricus (electric eel)
char Clupea harengus (Atlantic herring)
spil Sardina pilchardus (sardine)
asad Alosa sapidissima (American shad)
tru Takifugu rubripes (torafugu)
tfs Takifugu flavidus (sansaifugu)
tng Tetraodon nigroviridis (spotted green pufferfish)
ncc Notothenia coriiceps (black rockcod)
tben Trematomus bernacchii (emerald rockcod)
cgob Cottoperca gobio
pgeo Pseudochaenichthys georgianus (South Georgia icefish)
gacu Gymnodraco acuticeps
emac Eleginops maclovinus (Patagonian blennie)
ely Epinephelus lanceolatus (giant grouper)
efo Epinephelus fuscoguttatus (brown-marbled grouper)
plep Plectropomus leopardus (leopard coralgrouper)
sluc Sander lucioperca (pikeperch)
svit Sander vitreus (walleye)
ecra Etheostoma cragini (Arkansas darter)
esp Etheostoma spectabile (orangethroat darter)
pflv Perca flavescens (yellow perch)
pflt Perca fluviatilis (European perch)
gat Gasterosteus aculeatus (three-spined stickleback)
ppug Pungitius pungitius (ninespine stickleback)
afb Anoplopoma fimbria (sablefish)
clum Cyclopterus lumpus (lumpfish)
pswi Pseudoliparis swirei (Mariana hadal snailfish)
cana Clinocottus analis (woolly sculpin)
cve Cebidichthys violaceus (monkeyface prickleback)
amir Anarhichas minor (spotted wolffish)
msam Micropterus salmoides (largemouth bass)
schu Siniperca chuatsi (mandarin fish)
earm Enoplosus armatus (old wife)
cud Cheilinus undulatus (humphead wrasse)
spul Semicossyphus pulcher (California sheephead)
lmix Labrus mixtus (cuckoo wrasse)
htc Halichoeres trimaculatus (threespot wrasse)
alat Acanthopagrus latus (yellowfin seabream)
astr Antennarius striatus (striated frogfish)
pklu Pempheris klunzingeri
lco Larimichthys crocea (large yellow croaker)
mze Maylandia zebra (zebra mbuna)
onl Oreochromis niloticus (Nile tilapia)
oau Oreochromis aureus (blue tilapia)
ola Oryzias latipes (Japanese medaka)
oml Oryzias melastigma (Indian medaka)
csai Cololabis saira (Pacific saury)
xma Xiphophorus maculatus (southern platyfish)
xco Xiphophorus couchianus (Monterrey platyfish)
xhe Xiphophorus hellerii (green swordtail)
pret Poecilia reticulata (guppy)
pfor Poecilia formosa (Amazon molly)
plai Poecilia latipinna (sailfin molly)
pmei Poecilia mexicana (shortfin molly)
gaf Gambusia affinis (western mosquitofish)
pprl Poeciliopsis prolifica (blackstripe livebearer)
cvg Cyprinodon variegatus (sheepshead minnow)
ctul Cyprinodon tularosa (White Sands pupfish)
gmu Girardinichthys multiradiatus (darkedged splitfin)
nfu Nothobranchius furzeri (turquoise killifish)
kmr Kryptolebias marmoratus (mangrove rivulus)
alim Austrofundulus limnaeus (annual killifish)
nwh Nematolebias whitei (Rio pearlfish)
ltu Leuresthes tenuis (California grunion)
mcep Mugil cephalus (flathead mullet)
aoce Amphiprion ocellaris (clown anemonefish)
eja Embiotoca jacksoni (black perch)
bfre Brachyistius frenatus (kelp perch)
lcf Lates calcarifer (barramundi perch)
csem Cynoglossus semilaevis (tongue sole)
pov Paralichthys olivaceus (Japanese flounder)
ssen Solea senegalensis (Senegalese sole)
ssoe Solea solea (common sole)
hhip Hippoglossus hippoglossus (Atlantic halibut)
hsp Hippoglossus stenolepis (Pacific halibut)
pplt Pleuronectes platessa (European plaice)
smau Scophthalmus maximus (turbot)
sdu Seriola dumerili (greater amberjack)
slal Seriola lalandi dorsalis (Yellowtail amberjack)
xgl Xiphias gladius (swordfish)
hcq Hippocampus comes (tiger tail seahorse)
sscv Syngnathus scovelli (Gulf pipefish)
sbia Syngnathoides biaculeatus (alligator pipefish)
pee Phycodurus eques (leafy seadragon)
ptao Phyllopteryx taeniolatus (common seadragon)
bpec Boleophthalmus pectinirostris (great blue-spotted mudskipper)
eny Eucyclogobius newberryi (tidewater goby)
malb Monopterus albus (swamp eel)
bspl Betta splendens (Siamese fighting fish)
sjo Scomber japonicus (chub mackerel)
ssco Scomber scombrus (Atlantic mackerel)
tty Thunnus thynnus (Atlantic bluefin tuna)
gmh Gadus morhua (Atlantic cod)
sasa Salmo salar (Atlantic salmon)
stru Salmo trutta (river trout)
otw Oncorhynchus tshawytscha (Chinook salmon)
omy Oncorhynchus mykiss (rainbow trout)
ogo Oncorhynchus gorbuscha (pink salmon)
one Oncorhynchus nerka (sockeye salmon)
oki Oncorhynchus kisutch (coho salmon)
oke Oncorhynchus keta (chum salmon)
omm Oncorhynchus masou masou (cherry salmon)
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
salp Salvelinus sp. IW2-2015 (Arctic char)
snh Salvelinus namaycush (lake trout)
sfon Salvelinus fontinalis (brook trout)
cclu Coregonus clupeaformis (lake whitefish)
els Esox lucius (northern pike)
oep Osmerus eperlanus (European smelt)
sfm Scleropages formosus (Asian bonytongue)
pki Paramormyrops kingsleyae
aang Anguilla anguilla (European eel)
arot Anguilla rostrata (American eel)
ccog Conger conger (European conger)
loc Lepisosteus oculatus (spotted gar)
pspa Polyodon spathula (Mississippi paddlefish)
arut Acipenser ruthenus (sterlet)
psex Polypterus senegalus (gray bichir)
lcm Latimeria chalumnae (coelacanth)
|
other Vertebrates
|
cmk Callorhinchus milii (elephant shark)
rtp Rhincodon typus (whale shark)
cpla Chiloscyllium plagiosum (whitespotted bambooshark)
cpun Chiloscyllium punctatum (brownbanded bambooshark)
hoc Hemiscyllium ocellatum (epaulette shark)
scau Scyliorhinus canicula (smaller spotted catshark)
stoz Scyliorhinus torazame (cloudy catshark)
leri Leucoraja erinaceus (little skate)
haka Hemitrygon akajei (red stingray)
pmrn Petromyzon marinus (sea lamprey)
lrj Lethenteron reissneri (Far Eastern brook lamprey)
|
other Chordates
|
bfo Branchiostoma floridae (Florida lancelet)
bbel Branchiostoma belcheri (Belcher's lancelet)
cin Ciona intestinalis (yellow sea squirt)
sclv Styela clava (leathery sea squirt)
clep Clavelina lepadiformis (light-bulb sea squirt)
|
other Deuterostomes
|
spu Strongylocentrotus purpuratus (purple sea urchin)
lpic Lytechinus pictus (painted urchin)
lvg Lytechinus variegatus (green sea urchin)
ajj Apostichopus japonicus (Japanese sea cucumber)
aplc Acanthaster planci (crown-of-thorns starfish)
arun Luidia clathrata (European starfish)
aamu Asterias amurensis (Northern Pacific seastar)
afil Amphiura filiformis
ajc Anneissia japonica (feather star)
sko Saccoglossus kowalevskii (acorn worm)
pfll Ptychodera flava
|
Insects
|
dme Drosophila melanogaster (fruit fly)
der Drosophila erecta
dse Drosophila sechellia
dsi Drosophila simulans
dya Drosophila yakuba
dan Drosophila ananassae
dsr Drosophila serrata
dpo Drosophila pseudoobscura
dpe Drosophila persimilis
dmn Drosophila miranda
dwi Drosophila willistoni
dgr Drosophila grimshawi
dmo Drosophila mojavensis
daz Drosophila arizonae
dnv Drosophila navojoa
dhe Drosophila hydei
dvi Drosophila virilis
ccat Ceratitis capitata (Mediterranean fruit fly)
bod Bactrocera oleae (olive fruit fly)
bdr Bactrocera dorsalis (oriental fruit fly)
rze Rhagoletis zephyria (snowberry fruit fly)
aoq Anastrepha obliqua (West Indian fruit fly)
alud Anastrepha ludens (Mexican fruit fly)
tda Teleopsis dalmanni (Malaysian stalk-eyed fly)
mde Musca domestica (house fly)
scac Stomoxys calcitrans (stable fly)
lcq Lucilia cuprina (Australian sheep blowfly)
lsq Lucilia sericata (common green bottle fly)
cvj Calliphora vicina (urban bluebottle blowfly)
gfs Glossina fuscipes (tsetse fly)
ecoe Eupeodes corollae
clon Condylostylus longicornis
his Hermetia illucens (black soldier fly)
aga Anopheles gambiae (malaria mosquito)
acoz Anopheles coluzzii
aara Anopheles arabiensis
amer Anopheles merus
aste Anopheles stephensi (Asian malaria mosquito)
amap Anopheles maculipalpis
afun Anopheles funestus (African malaria mosquito)
amou Anopheles moucheti
amrs Anopheles marshallii
anil Anopheles nili
aali Anopheles albimanus
adar Anopheles darlingi (American malaria mosquito)
acos Anopheles coustani
aag Aedes aegypti (yellow fever mosquito)
aalb Aedes albopictus (Asian tiger mosquito)
asua Armigeres subalbatus
cqu Culex quinquefasciatus (southern house mosquito)
cpii Culex pipiens pallens (northern house mosquito)
cbri Culicoides brevitarsis
cns Contarinia nasturtii (swede midge)
bcoo Bradysia coprophila
lll Lutzomyia longipalpis
ppap Phlebotomus papatasi
cfel Ctenocephalides felis (cat flea)
bmor Bombyx mori (domestic silkworm)
bman Bombyx mandarina (wild silkworm)
msex Manduca sexta (tobacco hornworm)
dpl Danaus plexippus (monarch butterfly)
bany Bicyclus anynana (squinting bush brown)
mju Maniola jurtina (meadow brown)
niq Nymphalis io (European peacock)
vcd Vanessa cardui (painted lady)
mcix Melitaea cinxia (Glanville fritillary)
pmac Papilio machaon (common yellow swallowtail)
ppot Papilio polytes (common Mormon)
pxu Papilio xuthus (Asian swallowtail)
bphi Battus philenor (pipe-vine swallowtail)
prap Pieris rapae (cabbage white)
pbx Pieris brassicae (large cabbage white)
pnap Pieris napi (green-veined white)
zce Zerene cesonia (dogface butterfly)
ccrc Colias croceus (clouded yellow)
lsin Leptidea sinapis (Wood White)
aage Aricia agestis (brown argus)
haw Helicoverpa armigera (cotton bollworm)
hze Helicoverpa zea (corn earworm)
tnl Trichoplusia ni (cabbage looper)
sliu Spodoptera litura (tobacco cutworm)
ofu Ostrinia furnacalis (Asian corn borer)
onu Ostrinia nubilalis (European corn borer)
atra Amyelois transitella (navel orangeworm)
gmw Galleria mellonella (greater wax moth)
eclr Epargyreus clarus
pxy Plutella xylostella (diamondback moth)
pgw Pectinophora gossypiella (pink bollworm)
lgly Leguminivora glycinivorella (soybean pod borer)
cstb Cydia strobilella (spruce-seed moth)
cfum Choristoneura fumiferana (eastern spruce budworm)
tca Tribolium castaneum (red flour beetle)
tmol Tenebrio molitor (yellow mealworm)
dpa Dendroctonus ponderosae (mountain pine beetle)
esim Euwallacea similis
efor Euwallacea fornicatus (polyphagous shot-hole borer)
ity Ips typographus (European spruce bark beetle)
soy Sitophilus oryzae (rice weevil)
rfg Rhynchophorus ferrugineus (red palm weevil)
agrg Anthonomus grandis grandis (boll weevil)
atd Aethina tumida (small hive beetle)
cset Coccinella septempunctata (seven-spotted ladybird)
haxr Harmonia axyridis (harlequin ladybird)
agb Anoplophora glabripennis (Asian longhorned beetle)
ldc Leptinotarsa decemlineata (Colorado potato beetle)
dvv Diabrotica virgifera virgifera (western corn rootworm)
nvl Nicrophorus vespilloides (burying beetle)
dcor Dalotia coriaria (greenhouse rove beetle)
apln Agrilus planipennis (emerald ash borer)
ppyr Photinus pyralis (common eastern firefly)
otu Onthophagus taurus (bull-headed dung beetle)
ccrn Chrysoperla carnea
ame Apis mellifera (honey bee)
acer Apis cerana (Asiatic honeybee)
alab Apis laboriosa (Himalayan honeybee)
adr Apis dorsata (giant honeybee)
aflr Apis florea (little honeybee)
bim Bombus impatiens (common eastern bumble bee)
bbif Bombus bifarius (two-form bumblebee)
bvk Bombus vosnesenskii (yellow-faced bumblebee)
bvan Bombus vancouverensis nearcticus
bhun Bombus huntii (Hunt bumble bee)
bter Bombus terrestris (buff-tailed bumblebee)
baff Bombus affinis (rusty patched bumble bee)
bpyo Bombus pyrosoma
bpas Bombus pascuorum (common carder bee)
fvi Frieseomelitta varia
ccal Ceratina calcarata (carpenter bee)
obb Osmia bicornis bicornis (red mason bee)
olg Osmia lignaria (orchard mason bee)
mgen Megalopta genalis
apur Augochlora pura
nmea Nomia melanderi (Alkali bee)
cgig Colletes gigas
soc Solenopsis invicta (red fire ant)
mpha Monomorium pharaonis (pharaoh ant)
aec Acromyrmex echinatior (Panamanian leafcutter ant)
acep Atta cephalotes (leaf cutting ant)
acoc Atta colombica
mzt Mycetomoellerius zeteki
ccoa Cyphomyrmex costatus
tcz Trachymyrmex cornetzi
tsep Trachymyrmex septentrionalis
pbar Pogonomyrmex barbatus (red harvester ant)
vem Vollenhovia emeryi
cobs Cardiocondyla obscurior
tln Temnothorax longispinosus
tame Temnothorax americanus
tny Temnothorax nylanderi
hst Harpegnathos saltator (Jerdon's jumping ant)
dqu Dinoponera quadriceps
cfo Camponotus floridanus (Florida carpenter ant)
fex Formica exsecta (narrow-headed ant)
pmec Polyergus mexicanus
lhu Linepithema humile (Argentine ant)
pgc Pseudomyrmex gracilis (graceful twig ant)
obo Ooceraea biroi (clonal raider ant)
pcf Polistes canadensis
pfuc Polistes fuscatus (common paper wasp)
vps Vespula pensylvanica (western yellowjacket)
vcrb Vespa crabro (European hornet)
vve Vespa velutina (Asian hornet)
nvi Nasonia vitripennis (jewel wasp)
csol Ceratosolen solmsi marchali (fig wasp)
tpre Trichogramma pretiosum
lht Leptopilina heterotoma
lbd Leptopilina boulardi
mdl Microplitis demolitor
cglo Cotesia glomerata
ctyp Cotesia typhae
fas Fopius arisanus
dam Diachasma alloeum
agif Aphidius gifuensis
cins Chelonus insularis
vcan Venturia canescens
ccin Cephus cinctus (wheat stem sawfly)
dsm Diprion similis
npt Neodiprion pinetum (white pine sawfly)
nfb Neodiprion fabricii
nlo Neodiprion lecontei (redheaded pine sawfly)
nvg Neodiprion virginianus
aroa Athalia rosae (coleseed sawfly)
api Acyrthosiphon pisum (pea aphid)
dnx Diuraphis noxia (Russian wheat aphid)
ags Aphis gossypii (cotton aphid)
rmd Rhopalosiphum maidis (corn leaf aphid)
acoo Adelges cooleyi (spruce gall adelgid)
dvt Daktulosphaira vitifoliae (grape phylloxera)
btab Bemisia tabaci (sweet potato whitefly)
dci Diaphorina citri (Asian citrus psyllid)
clec Cimex lectularius (bed bug)
hhal Halyomorpha halys (brown marmorated stink bug)
nlu Nilaparvata lugens (brown planthopper)
lda Lycorma delicatula (spotted lanternfly)
hvi Homalodisca vitripennis (glassy-winged sharpshooter)
mqu Macrosteles quadrilineatus (aster leafhopper)
phu Pediculus humanus corporis (human body louse)
foc Frankliniella occidentalis (western flower thrips)
tpal Thrips palmi (melon thrips)
zne Zootermopsis nevadensis (dampwood termite)
csec Cryptotermes secundus (drywood termite)
pame Periplaneta americana (American cockroach)
sgre Schistocerca gregaria (desert locust)
bror Bacillus rossius redtenbacheri
iel Ischnura elegans (blue-tailed damselfly)
hamr Hetaerina americana (American ruby spot damselfly)
|
Non-insect arthropods
|
fcd Folsomia candida
dpx Daphnia pulex (common water flea)
dmk Daphnia magna (water flea)
dpz Daphnia pulicaria
afra Artemia franciscana
eaf Eurytemora carolleeae
lsm Lepeophtheirus salmonis (salmon louse)
tcf Tigriopus californicus (tidepool copepod)
pvm Penaeus vannamei (Pacific white shrimp)
pja Penaeus japonicus (kuruma prawn)
pchn Penaeus chinensis (fleshy prawn)
pmoo Penaeus monodon (black tiger shrimp)
hame Homarus americanus (American lobster)
pcla Procambarus clarkii (red swamp crayfish)
cqd Cherax quadricarinatus (Australian red claw crayfish)
ptru Portunus trituberculatus (swimming crab)
sprm Scylla paramamosain (green mud crab)
esn Eriocheir sinensis (Chinese mitten crab)
mnz Macrobrachium nipponense (oriental river prawn)
mrj Macrobrachium rosenbergii (giant freshwater prawn)
porn Panulirus ornatus (ornate spiny lobster)
oot Oratosquilla oratoria (Japanese mantis shrimp)
hazt Hyalella azteca
ppoi Pollicipes pollicipes (gooseneck barnacle)
isc Ixodes scapularis (black-legged tick)
dsv Dermacentor silvarum
dalb Dermacentor albipictus (winter tick)
rsan Rhipicephalus sanguineus (brown dog tick)
rmp Rhipicephalus microplus (southern cattle tick)
oti Ornithodoros turicata (relapsing fever tick)
vde Varroa destructor (honeybee mite)
vja Varroa jacobsoni
goe Galendromus occidentalis (western predatory mite)
tut Tetranychus urticae (two-spotted spider mite)
dpte Dermatophagoides pteronyssinus (European house dust mite)
dfr Dermatophagoides farinae (American house dust mite)
cscu Centruroides sculpturatus (bark scorpion)
cvs Centruroides vittatus (striped bark scorpion)
ptep Parasteatoda tepidariorum (common house spider)
abru Argiope bruennichi (wasp spider)
udv Uloborus diversus
sdm Stegodyphus dumicola
lpol Limulus polyphemus (Atlantic horseshoe crab)
|
other Ecdysozoa
|
pmeo Paramacrobiotus metropolitanus
cel Caenorhabditis elegans (nematode)
cbr Caenorhabditis briggsae (nematode)
crq Caenorhabditis remanei (nematode)
nai Necator americanus (New World hookworm)
bmy Brugia malayi (filaria)
loa Loa loa (eye worm)
tsp Trichinella spiralis
|
other Protostomes
|
hro Helobdella robusta
lgi Lottia gigantea (owl limpet)
pvul Patella vulgata (common limpet)
pcan Pomacea canaliculata (golden apple snail)
lsax Littorina saxatilis
barl Babylonia areolata (ivory shell)
bgt Biomphalaria glabrata (bloodfluke planorb)
gae Gigantopelta aegis (peltospirid snail)
hrf Haliotis rufescens (red abalone)
hrj Haliotis rubra (blacklip abalone)
hasi Haliotis asinina (tropical abalone)
hcra Haliotis cracherodii (black abalone)
crg Magallana gigas (Pacific oyster)
canu Magallana angulata (Portugese oyster)
cvn Crassostrea virginica (eastern oyster)
oed Ostrea edulis (European flat oyster)
myi Mizuhopecten yessoensis (Yesso scallop)
pmax Pecten maximus (king scallop)
airr Argopecten irradians (bay scallop)
yba Ylistrum balloti (Ballot's saucer scallop)
mcaf Mytilus californianus (California mussel)
mmer Mercenaria mercenaria (northern quahog)
rphi Ruditapes philippinarum (Manila clam)
dpol Dreissena polymorpha (zebra mussel)
maea Mya arenaria (softshell)
obi Octopus bimaculoides (California two-spot octopus)
osn Octopus sinensis (East Asian common octopus)
ljp Liolophura japonica (common chiton)
lak Lingula anatina
smm Schistosoma mansoni
shx Schistosoma haematobium (urinary blood fluke)
ovi Opisthorchis viverrini (Southeast Asian liver fluke)
egl Echinococcus granulosus (hydatid tapeworm)
llon Lineus longissimus (bootlace worm)
|
other Eumetazoa
|
nve Nematostella vectensis (starlet sea anemone)
epa Exaiptasia diaphana (Aiptasia)
aten Actinia tenebrosa (Australian red waratah sea anemone)
adf Acropora digitifera (stony coral)
amil Acropora millepora
mcaz Montipora capricornis (leaf plate montipora)
mfoo Montipora foliosa
pdam Pocillopora damicornis (lace coral)
spis Stylophora pistillata (Smooth Cauliflower Coral)
dgt Dendronephthya gigantea (soft corals)
xen Xenia sp. Carnegie-2017 (soft corals)
hmg Hydra vulgaris (swiftwater hydra)
hsy Hydractinia symbiolongicarpus
res Rhopilema esculentum
tad Trichoplax adhaerens (placozoan)
|
other Metazoa
|
aqu Amphimedon queenslandica (sponge)
cclm Corticium candelabrum
|
Plants
|
Monocots
|
osa Oryza sativa japonica (Japanese rice)
dosa Oryza sativa japonica (Japanese rice) (RAPDB)
obr Oryza brachyantha (malo sina)
ogl Oryza glaberrima (African rice)
bdi Brachypodium distachyon (stiff brome)
ats Aegilops tauschii (wheat D)
tdc Triticum dicoccoides (wild emmer wheat)
taes Triticum aestivum (bread wheat)
tua Triticum urartu (red wild einkorn wheat)
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
lper Lolium perenne (perennial ryegrass)
lrd Lolium rigidum (rigid ryegrass)
sbi Sorghum bicolor (sorghum)
zma Zea mays (maize)
mflo Miscanthus floridulus
sita Setaria italica (foxtail millet)
svs Setaria viridis (green foxtail)
pvir Panicum virgatum (switchgrass)
phai Panicum hallii (Hall's panicgrass)
paua Phragmites australis (common reed)
tang Typha angustifolia (narrow-leaf cattail)
pda Phoenix dactylifera (date palm)
egu Elaeis guineensis (African oil palm)
mus Musa acuminata (dessert banana)
zof Zingiber officinale (ginger)
dct Dendrobium catenatum
peq Phalaenopsis equestris
aof Asparagus officinalis (garden asparagus)
|
Eudicots
|
ath Arabidopsis thaliana (thale cress)
aly Arabidopsis lyrata (lyrate rockcress)
crb Capsella rubella (pink shepherd's-purse)
csat Camelina sativa (false flax)
eus Eutrema salsugineum (saltwater cress)
brp Brassica rapa (field mustard)
bna Brassica napus (rape)
boe Brassica oleracea (wild cabbage)
rsz Raphanus sativus (radish)
thj Tarenaya hassleriana (spider flower)
cpap Carica papaya (papaya)
cit Citrus sinensis (Valencia orange)
cic Citrus x clementina (clementine)
pvy Pistacia vera (pistachio)
minc Mangifera indica (mango)
tcc Theobroma cacao (cacao)
gra Gossypium raimondii
ghi Gossypium hirsutum (upland cotton)
gab Gossypium arboreum (tree cotton)
hsyr Hibiscus syriacus (Rose-of-Sharon)
dzi Durio zibethinus (durian)
egr Eucalyptus grandis (rose gum)
rarg Rhodamnia argentea (silver malletwood)
gmx Glycine max (soybean)
gsj Glycine soja (wild soybean)
pvu Phaseolus vulgaris (common bean)
vra Vigna radiata (mung bean)
var Vigna angularis (adzuki bean)
vun Vigna unguiculata (cowpea)
vum Vigna umbellata (ricebean)
ccaj Cajanus cajan (pigeon pea)
aprc Abrus precatorius (Indian licorice)
mtr Medicago truncatula (barrel medic)
tpra Trifolium pratense (red clover)
cam Cicer arietinum (chickpea)
psat Lathyrus oleraceus (garden pea)
vvo Vicia villosa (hairy vetch)
lja Lotus japonicus
adu Arachis duranensis
aip Arachis ipaensis
ahf Arachis hypogaea (peanut)
lang Lupinus angustifolius (narrow-leaved blue lupine)
pcin Prosopis cineraria
qsa Quillaja saponaria (soapbark tree)
fve Fragaria vesca (woodland strawberry)
aans Argentina anserina (silverweed cinquefoil)
rcn Rosa chinensis (China rose)
pper Prunus persica (peach)
pmum Prunus mume (Japanese apricot)
pavi Prunus avium (sweet cherry)
pdul Prunus dulcis (almond)
mdm Malus domestica (apple)
msyl Malus sylvestris (European crab apple)
pxb Pyrus x bretschneideri (Chinese white pear)
pcox Pyrus communis (pear)
zju Ziziphus jujuba (Chinese jujube)
mnt Morus notabilis
csav Cannabis sativa (hemp)
hlp Humulus lupulus (common hop)
csv Cucumis sativus (cucumber)
cmo Cucumis melo (muskmelon)
bhj Benincasa hispida (wax gourd)
mcha Momordica charantia (bitter melon)
cmax Cucurbita maxima (winter squash)
cmos Cucurbita moschata (crookneck pumpkin)
cpep Cucurbita pepo subsp. pepo (vegetable marrow)
rcu Ricinus communis (castor bean)
mean Mercurialis annua (annual mercury)
jcu Jatropha curcas (Barbados nut)
hbr Hevea brasiliensis (rubber tree)
mesc Manihot esculenta (cassava)
pop Populus trichocarpa (black cottonwood)
peu Populus euphratica (Euphrates poplar)
palz Populus alba (white poplar)
pnz Populus nigra (Lombardy poplar)
jre Juglans regia (English walnut)
cill Carya illinoinensis (pecan)
cave Corylus avellana (European hazelnut)
aglu Alnus glutinosa (common alder)
qsu Quercus suber (cork oak)
qlo Quercus lobata (valley oak)
csaa Castanea sativa (European chestnut)
twl Tripterygium wilfordii (thunder duke vine)
vvi Vitis vinifera (wine grape)
vri Vitis riparia (riverbank grape)
sly Solanum lycopersicum (tomato)
spen Solanum pennellii
sot Solanum tuberosum (potato)
sstn Solanum stenotomum
sdul Solanum dulcamara (climbing nightshade)
sver Solanum verrucosum
cann Capsicum annuum (peppers)
lbb Lycium barbarum (goji berry)
nta Nicotiana tabacum (common tobacco)
nsy Nicotiana sylvestris (wood tobacco)
nto Nicotiana tomentosiformis
nau Nicotiana attenuata (coyote tobacco)
ini Ipomoea nil (Japanese morning glory)
itr Ipomoea triloba (trilobed morning glory)
sind Sesamum indicum (sesame)
oeu Olea europaea var. sylvestris (wild olive)
egt Erythranthe guttata (spotted monkey flower)
sspl Salvia splendens (scarlet sage)
smil Salvia miltiorrhiza (redroot sage)
shis Salvia hispanica (chia)
apan Andrographis paniculata
hpum Henckelia pumila
phua Primulina huaijiensis
pebu Primulina eburnea
ptab Primulina tabacum
carb Coffea arabica (coffee)
han Helianthus annuus (common sunflower)
bhw Bidens hawaiensis
ecad Erigeron canadensis (horseweed)
lsv Lactuca sativa (garden lettuce)
ccav Cynara cardunculus var. scolymus (artichoke)
dcr Daucus carota (carrot)
agrv Apium graveolens (celery)
csin Camellia sinensis (tea plant)
rvl Rhododendron vialii
aew Actinidia eriantha (wild kiwifruit)
dlt Diospyros lotus (date-plum)
cflo Cornus florida (flowering dogwood)
bvg Beta vulgaris (sugar beet)
soe Spinacia oleracea (spinach)
cqi Chenopodium quinoa (quinoa)
atri Amaranthus tricolor (tampala)
slaf Silene latifolia (white campion)
mof Malania oleifera
nnu Nelumbo nucifera (sacred lotus)
ming Macadamia integrifolia (macadamia nut)
tss Telopea speciosissima (New South Wales waratah)
psom Papaver somniferum (opium poppy)
|
other Flowering plants
|
msin Magnolia sinica
acak Aristolochia californica
ncol Nymphaea colorata (blue-petal water lily)
atr Amborella trichopoda
|
other Seed plants
|
cjf Cryptomeria japonica (Japanese cedar)
|
other Vascular plants
|
smo Selaginella moellendorffii
|
Non-vascular plants
|
ppp Physcomitrium patens (spreading earthmoss)
|
Green algae
|
cre Chlamydomonas reinhardtii
vcn Volvox carteri f. nagariensis
mng Monoraphidium neglectum
csl Coccomyxa subellipsoidea
cvr Chlorella variabilis
apro Auxenochlorella protothecoides
olu Ostreococcus lucimarinus
ota Ostreococcus tauri
bpg Bathycoccus prasinos
mis Micromonas commoda
mpp Micromonas pusilla
|
Red algae
|
gsl Galdieria sulphuraria
|
Fungi
|
Ascomycetes
|
sce Saccharomyces cerevisiae (budding yeast)
seub Saccharomyces eubayanus
spao Saccharomyces paradoxus
ago Eremothecium gossypii
erc Eremothecium cymbalariae
kla Kluyveromyces lactis
kmx Kluyveromyces marxianus
lth Lachancea thermotolerans
vpo Vanderwaltozyma polyspora
zro Zygosaccharomyces rouxii
cgr Nakaseomyces glabratus
ncs Naumovozyma castellii
ndi Naumovozyma dairenensis
tpf Tetrapisispora phaffii
tbl Henningerozyma blattae
tgb Torulaspora globosa
tdl Torulaspora delbrueckii
kaf Kazachstania africana
kng Huiozyma naganishii
zmk Zygotorulaspora mrakii
slud Saccharomycodes ludwigii
dha Debaryomyces hansenii
pic Scheffersomyces stipitis
pgu Meyerozyma guilliermondii
spaa Spathaspora passalidarum
lel Lodderomyces elongisporus
lbg Lodderomyces beijingensis
cot Lodderomyces orthopsilosis
cal Candida albicans
ctp Candida tropicalis
cdu Candida dubliniensis
cten Yamadazyma tenuis
clu Clavispora lusitaniae ATCC 42720
clus Clavispora lusitaniae CBS 6936
caur Candidozyma auris
asau Australozyma saopauloensis
ppa Komagataella phaffii
pkz Pichia kudriavzevii
bnn Brettanomyces nanus
bbrx Brettanomyces bruxellensis
opa Ogataea parapolymorpha
yli Yarrowia lipolytica
slb Sugiyamaella lignohabitans
ncr Neurospora crassa
nte Neurospora tetrasperma
smp Sordaria macrospora
pan Podospora anserina
pbel Podospora bellae-mahoneyi
ppsd Podospora pseudocomata
ppsp Podospora pseudopauciseta
ppsa Podospora pseudoanserina
ttt Thermothielavioides terrestris
mtm Thermothelomyces thermophilus
cthr Thermochaetoides thermophila
rthe Remersonia thermophila
mgr Pyricularia oryzae
ppei Pyricularia pennisetigena
pgri Pyricularia grisea
tmn Phaeoacremonium minimum
ssck Sporothrix schenckii
fgr Fusarium graminearum
fpu Fusarium pseudograminearum
fpoa Fusarium poae
fvn Fusarium venenatum
fvr Fusarium verticillioides
fox Fusarium oxysporum
nhe Fusarium vanettenii
ffc Fusarium falciforme
fkr Fusarium keratoplasticum
fmu Fusarium musae
tre Trichoderma reesei QM6a
trr Trichoderma reesei RUT C-30
tatv Trichoderma atroviride
tasp Trichoderma asperellum
maw Metarhizium acridum
maj Metarhizium robertsii
mbrn Metarhizium brunneum
pchm Pochonia chlamydosporia
uvi Ustilaginoidea virens
cmt Cordyceps militaris
amus Akanthomyces muscarius
plj Purpureocillium lilacinum
ptkz Purpureocillium takamizusanense
dcon Drechmeria coniospora
val Verticillium alfalfae
vda Verticillium dahliae
cfj Colletotrichum fioriniae
chig Colletotrichum higginsianum
cdet Colletotrichum destructivum
sapo Scedosporium apiospermum
ela Eutypa lata
pfy Pestalotiopsis fici
ssl Sclerotinia sclerotiorum
bfu Botrytis cinerea (gray mold)
mbe Drepanopeziza brunnea
psco Mollisia scopiformis
glz Glarea lozoyensis
ani Aspergillus nidulans
afm Aspergillus fumigatus
act Aspergillus clavatus
nfi Aspergillus fischeri
aor Aspergillus oryzae
ang Aspergillus niger (black aspergilli)
afv Aspergillus flavus
aluc Aspergillus luchuensis
ache Aspergillus chevalieri
apuu Aspergillus puulaauensis
pcs Penicillium rubens
pdp Penicillium digitatum
pou Penicillium oxalicum
ppsf Penicillium psychrofluorescens
tmf Talaromyces marneffei
trg Talaromyces rugulosus
cim Coccidioides immitis
cpw Coccidioides posadasii
ure Uncinocarpus reesii
abe Trichophyton benhamiae
tve Trichophyton verrucosum
pbl Paracoccidioides lutzii Pb01
pbn Paracoccidioides brasiliensis
aje Histoplasma mississippiense
bgh Blastomyces gilchristii
pno Parastagonospora nodorum
pte Pyrenophora teres
ptrr Pyrenophora tritici-repentis
bze Bipolaris zeicola
bsc Bipolaris sorokiniana
bor Bipolaris oryzae
aalt Alternaria alternata
adac Alternaria dauci
arab Ascochyta rabiei
ztr Zymoseptoria tritici
pfj Pseudocercospora fijiensis
ffu Fulvia fulva
cbet Cercospora beticola
bcom Baudoinia panamericana
npa Neofusicoccum parvum
tml Tuber melanosporum
spo Schizosaccharomyces pombe (fission yeast)
som Schizosaccharomyces osmophilus (fission yeast)
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Basidiomycetes
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cne Cryptococcus deneoformans JEC21
cnb Cryptococcus deneoformans B-3501A
cng Cryptococcus neoformans var. grubii H99
cgi Cryptococcus gattii
cdeu Cryptococcus deuterogattii
cdec Cryptococcus decagattii
cteg Cryptococcus tetragattii
cbas Cryptococcus bacillisporus
cdep Cryptococcus depauperatus
kmg Kwoniella mangroviensis
kne Kwoniella newhampshirensis
kdj Kwoniella dejecticola
kbi Kwoniella bestiolae
kpin Kwoniella pini
ksh Kwoniella shivajii
ker Kwoniella europaea
kep Kwoniella dendrophila
tms Tremella mesenterica
ppl Postia placenta
tvs Trametes versicolor
dsq Dichomitus squalens
pco Phanerochaete carnosa
shs Stereum hirsutum
hir Heterobasidion irregulare
psq Punctularia strigosozonata
adl Auricularia subglabra
fme Fomitiporia mediterranea
gtr Gloeophyllum trabeum
rsx Rhizoctonia solani
lbc Laccaria bicolor
cci Coprinopsis cinerea (gray shag)
abp Agaricus bisporus var. burnettii JB137-S8
abv Agaricus bisporus var. bisporus H97
mpr Moniliophthora perniciosa
mrr Moniliophthora roreri
more Marasmius oreades (fairy-ring mushroom)
scm Schizophyllum commune
cput Coniophora puteana
sla Serpula lacrymans
wse Wallemia mellicola
uma Mycosarcoma maydis
pfp Pseudozyma flocculosa
mgl Malassezia globosa
mrt Malassezia restricta
mves Malassezia vespertilionis
pgr Puccinia graminis
ptrc Puccinia triticina (wheat leaf rust)
pstr Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
mlr Melampsora larici-populina
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Protists
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other Opisthokonta
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mbr Monosiga brevicollis
sre Salpingoeca rosetta
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Amoebozoa
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ddi Dictyostelium discoideum (cellular slime mold)
dpp Dictyostelium purpureum (cellular slime mold)
dfa Cavenderia fasciculata (cellular slime mold)
edi Entamoeba dispar
eiv Entamoeba invadens
acan Acanthamoeba castellanii
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Alveolates
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prei Plasmodium reichenowi
tet Tetrahymena thermophila
ptm Paramecium tetraurelia
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Stramenopiles
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pti Phaeodactylum tricornutum
fcy Fragilariopsis cylindrus
tps Thalassiosira pseudonana
ngd Nannochloropsis gaditana
aaf Aureococcus anophagefferens
pif Phytophthora infestans
psoj Phytophthora sojae
spar Saprolegnia parasitica
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Heterolobosea
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ngr Naegleria gruberi
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Metamonada
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tva Trichomonas vaginalis
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other Eukaryota
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ehx Emiliania huxleyi
gtt Guillardia theta
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Bacteria
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Enterobacteria
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pdis Pantoea soli
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other Gammaproteobacteria
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pmai Paraphotobacterium marinum
gni Brumicola nitratireducens
hja Halioglobus japonicus
afus Aequoribacter fuscus
tzo Thiosulfativibrio zosterae
rfo Reinekea forsetii
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Betaproteobacteria
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bug Burkholderia sp. CCGE1001
vaa Variovorax sp. PAMC 28711
mbat Methylopumilus planktonicus
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Alphaproteobacteria
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hoe Hoeflea sp. IMCC20628
meni Methylobacterium sp. NI91
mbrc Methylobacterium brachiatum
acut Acuticoccus sp. I52.16.1
nre Novosphingobium resinovorum
qsp Qipengyuania spongiae
lck Lichenicola cladoniae
htq Hypericibacter terrae
hadh Hypericibacter adhaerens
peg Pelagibacter giovannonii
apc Alpha proteobacterium HIMB59
apm Alpha proteobacterium HIMB5
apb Puniceispirillum marinum
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Campylobacterota
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alan Aliarcobacter lanthieri
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Planctomycetota
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amuc Aeoliella mucimassa
gpn Gimesia panareensis
tim Tuwongella immobilis
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Bacteroidota
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spib Spirosoma aureum
stae Spirosoma taeanense
run Runella rosea
hye Hymenobacter sp. DG25A
hyz Hymenobacter sp. PAMC 26628
hrs Hymenobacter sp. BT18
mtt Marivirga tractuosa
fpf Mangrovivirga cuniculi
fuv Fulvivirga lutea
dok Dokdonia sp. MED134
ddo Dokdonia donghaensis
nom Nonlabens sp. MIC269
nsd Nonlabens tegetincola
nob Nonlabens sp. MB-3u-79
pom Polaribacter sp. MED152
cagg Costertonia aggregata
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Rhodothermota
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sru Salinibacter ruber DSM 13855
srm Salinibacter ruber M8
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Bacilli
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bbev Salisediminibacterium beveridgei
exu Exiguobacterium sp. U13-1
psop Paenibacillus sophorae
oen Oenococcus sp. UCMA 16435
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other Bacillota
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fro Faecalibaculum rodentium
calk Contubernalis alkaliaceticus
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Actinomycetota
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mmag Mycolicibacterium madagascariense
mpsc Mycolicibacterium psychrotolerans
aqg Aquiluna borgnonia
psai Pontimonas salivibrio
chre Chryseoglobus sp. 28M-23
mhum Microcella humidisoli
gln Glaciihabitans sp. INWT7
agx Agreia sp. COWG
subt Subtercola sp. PAMC28395
aagi Arthrobacter agilis
rub Rubrobacter tropicus
rmar Rubrobacter marinus
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Cyanobacteriota
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ana Nostoc sp. PCC 7120
nosq Nostoc sp. UHCC 0926
scyt Scytonema sp. HK-05
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Archaea
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Methanobacteriota
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hal Halobacterium salinarum NRC-1
hsl Halobacterium salinarum R1
hanr Halobacterium salinarum NRC-34001
hhb Halobacterium hubeiense
hags Halobacterium sp. GSL-19
habo Halobacterium sp. BOL4-2
hlu Halobacterium litoreum
hanx Halobacterium sp. NMX12-1
hahs Halanaeroarchaeum sp. HSR-CO
halx Halorussus limi
haxz Halorussus gelatinilyticus
hayc Halorussus salilacus
sali Salinarchaeum sp. Harcht-Bsk1
saim Salinarchaeum sp. IM2453
hara Natranaeroarchaeum sulfidigenes
hma Haloarcula marismortui ATCC 43049
hsin Haloarcula marismortui ATCC 33800
hhi Haloarcula hispanica ATCC 33960
hhn Haloarcula hispanica N601
hab Haloarcula sp. CBA1115
hta Haloarcula taiwanensis
halj Haloarcula sp. JP-L23
hut Halorhabdus utahensis
hti Halorhabdus tiamatea
hala Halorhabdus sp. CBA1104
hasv Halorhabdus sp. SVX81
habn Halorhabdus sp. BNX81
hmu Halomicrobium mukohataei
halz Halomicrobium mukohataei JP60
hall Halomicrobium sp. LC1Hm
hazp Halomicrobium sp. ZPS1
hali Halorientalis sp. IM1011
hsn Halapricum salinum
hds Halapricum desulfuricans
hrr Halosimplex rubrum
hpel Halosimplex pelagicum
hlt Halosimplex litoreum
ssai Salinirubellus salinus
haad Halocatena salina
nph Natronomonas pharaonis
nmo Natronomonas moolapensis
nsal Natronomonas salina
hwa Haloquadratum walsbyi DSM 16790
hwc Haloquadratum walsbyi C23
haq Haloplanus rubicundus CBA1112
haj Haloplanus rubicundus CBA1113
haer Haloplanus aerogenes
hra Haloplanus rallus
hla Halorubrum lacusprofundi
halp Halorubrum sp. PV6
halb Halorubrum sp. BOL3-1
hezz Halorubrum ezzemoulense
halq Halorubrum sp. CBA1229
hss Halorubrum ruber
hsai Halorubrum salinarum
hazz Halorubrum sp. 2020YC2
srub Salinigranum rubrum
hae Halohasta litchfieldiae
hmp Halobaculum magnesiiphilum
hrm Halobaculum rubrum
hacb Halobaculum sp. CBA1158
haaa Halalkaliarchaeum sp. AArc-CO
htu Haloterrigena turkmenica
hsal Haloterrigena salifodinae
hakz Haloterrigena alkaliphila
nmg Natrialba magadii
hxa Halopiger xanaduensis
nat Natrinema sp. J7-2
npe Natrinema pellirubrum
nvr Natrinema versiforme
haly Natrinema halophilum
hlo Natrinema longum
nge Natronobacterium gregoryi
hlc Natronobacterium lacisalsi
hru Halovivax ruber
hlr Halostagnicola larsenii
naj Natrarchaeobaculum aegyptiacum
nag Natrarchaeobaculum sulfurireducens AArc-Mg
nan Natrarchaeobaculum sulfurireducens AArc1
nbg Natronorubrum bangense
hda Natronorubrum daqingense
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