| T01001 | hsa | Homo sapiens (human) |
| T01005 | ptr | Pan troglodytes (chimpanzee) |
| T02283 | pps | Pan paniscus (bonobo) |
| T02442 | ggo | Gorilla gorilla gorilla (western lowland gorilla) |
| T01416 | pon | Pongo abelii (Sumatran orangutan) |
| T03265 | nle | Nomascus leucogenys (northern white-cheeked gibbon) |
| T01028 | mcc | Macaca mulatta (rhesus monkey) |
| T02918 | mcf | Macaca fascicularis (crab-eating macaque) |
| T04361 | csab | Chlorocebus sabaeus (green monkey) |
| T07242 | caty | Cercocebus atys (sooty mangabey) |
| T07474 | panu | Papio anubis (olive baboon) |
| T08041 | tge | Theropithecus gelada (gelada) |
| T03989 | rro | Rhinopithecus roxellana (golden snub-nosed monkey) |
| T04641 | rbb | Rhinopithecus bieti (black snub-nosed monkey) |
| T07225 | tfn | Trachypithecus francoisi (Francois's langur) |
| T07491 | pteh | Piliocolobus tephrosceles (Ugandan red Colobus) |
| T03264 | cjc | Callithrix jacchus (white-tufted-ear marmoset) |
| T04350 | sbq | Saimiri boliviensis boliviensis (Bolivian squirrel monkey) |
| T07836 | csyr | Carlito syrichta (Philippine tarsier) |
| T07238 | mmur | Microcebus murinus (gray mouse lemur) |
| T08326 | lcat | Lemur catta (Ring-tailed lemur) |
| T07855 | oga | Otolemur garnettii (small-eared galago) |
| T01002 | mmu | Mus musculus (house mouse) |
| T05910 | mcal | Mus caroli (Ryukyu mouse) |
| T05929 | mpah | Mus pahari (shrew mouse) |
| T01003 | rno | Rattus norvegicus (rat) |
| T07224 | mcoc | Mastomys coucha (southern multimammate mouse) |
| T05884 | mun | Meriones unguiculatus (Mongolian gerbil) |
| T02813 | cge | Cricetulus griseus (Chinese hamster) |
| T08306 | maua | Mesocricetus auratus (golden hamster) |
| T07241 | pleu | Peromyscus leucopus (white-footed mouse) |
| T08307 | morg | Microtus oregoni (creeping vole) |
| T08327 | aamp | Arvicola amphibius (Eurasian water vole) |
| T03372 | ngi | Nannospalax galili (Upper Galilee mountains blind mole rat) |
| T02812 | hgl | Heterocephalus glaber (naked mole-rat) |
| T07777 | cpoc | Cavia porcellus (domestic guinea pig) |
| T04791 | ccan | Castor canadensis (American beaver) |
| T07834 | dord | Dipodomys ordii (Ord's kangaroo rat) |
| T07891 | dsp | Dipodomys spectabilis (banner-tailed kangaroo rat) |
| T08117 | ncar | Neosciurus carolinensis (gray squirrel) |
| T03373 | ocu | Oryctolagus cuniculus (rabbit) |
| T07609 | opi | Ochotona princeps (American pika) |
| T02978 | tup | Tupaia chinensis (Chinese tree shrew) |
| T01007 | cfa | Canis lupus familiaris (dog) |
| T05911 | vvp | Vulpes vulpes (red fox) |
| T07435 | vlg | Vulpes lagopus (Arctic fox) |
| T01329 | aml | Ailuropoda melanoleuca (giant panda) |
| T03271 | umr | Ursus maritimus (polar bear) |
| T05909 | uah | Ursus arctos horribilis (North American brown bear) |
| T07931 | uar | Ursus americanus (American black bear) |
| T05871 | elk | Enhydra lutris kenyoni (northern sea otter) |
| T08100 | llv | Lutra lutra (Eurasian river otter) |
| T07239 | mpuf | Mustela putorius furo (domestic ferret) |
| T05148 | oro | Odobenus rosmarus divergens (Pacific walrus) |
| T07240 | eju | Eumetopias jubatus (Steller sea lion) |
| T07874 | zca | Zalophus californianus (California sea lion) |
| T07472 | mlx | Mirounga leonina (Southern elephant seal) |
| T02385 | fca | Felis catus (domestic cat) |
| T07555 | pyu | Puma yagouaroundi (jaguarundi) |
| T07574 | pbg | Prionailurus bengalensis (leopard cat) |
| T02988 | ptg | Panthera tigris altaica (Amur tiger) |
| T06062 | ppad | Panthera pardus (leopard) |
| T04657 | aju | Acinonyx jubatus (cheetah) |
| T07257 | hhv | Hyaena hyaena (striped hyena) |
| T01008 | bta | Bos taurus (cow) |
| T02919 | bom | Bos mutus (wild yak) |
| T04792 | biu | Bos indicus (zebu cattle) |
| T05912 | bbub | Bubalus bubalis (water buffalo) |
| T02910 | chx | Capra hircus (goat) |
| T03117 | oas | Ovis aries (sheep) |
| T07255 | oda | Oryx dammah (scimitar-horned oryx) |
| T07554 | ccad | Cervus canadensis (wapiti) |
| T01009 | ssc | Sus scrofa (pig) |
| T02979 | cfr | Camelus ferus (Wild Bactrian camel) |
| T07534 | cbai | Camelus bactrianus (Bactrian camel) |
| T04642 | cdk | Camelus dromedarius (Arabian camel) |
| T08098 | vpc | Vicugna pacos (alpaca) |
| T03086 | bacu | Balaenoptera acutorostrata scammoni (minke whale) |
| T03090 | lve | Lipotes vexillifer (Yangtze River dolphin) |
| T05247 | oor | Orcinus orca (killer whale) |
| T05885 | dle | Delphinapterus leucas (beluga whale) |
| T06011 | pcad | Physeter catodon (sperm whale) |
| T07759 | psiu | Phocoena sinus (vaquita) |
| T01058 | ecb | Equus caballus (horse) |
| T04644 | epz | Equus przewalskii (Przewalski's horse) |
| T04645 | eai | Equus asinus (ass) |
| T02920 | myb | Myotis brandtii (Brandt's bat) |
| T02992 | myd | Myotis davidii (David's myotis) |
| T07220 | mmyo | Myotis myotis (greater mouse-eared bat) |
| T07795 | mlf | Myotis lucifugus (little brown bat) |
| T05883 | mna | Miniopterus natalensis (Natal long-fingered bat) |
| T07682 | pkl | Pipistrellus kuhlii (Kuhl's pipistrelle) |
| T04661 | hai | Hipposideros armiger (great roundleaf bat) |
| T05907 | dro | Desmodus rotundus (common vampire bat) |
| T07222 | shon | Sturnira hondurensis |
| T07223 | ajm | Artibeus jamaicensis (Jamaican fruit-eating bat) |
| T07739 | pdic | Phyllostomus discolor (pale spear-nosed bat) |
| T07912 | phas | Phyllostomus hastatus (greater spear-nosed bat) |
| T07221 | mmf | Molossus molossus (Pallas's mastiff bat) |
| T07722 | rfq | Rhinolophus ferrumequinum (greater horseshoe bat) |
| T02993 | pale | Pteropus alecto (black flying fox) |
| T07511 | pgig | Pteropus giganteus (Indian flying fox) |
| T07815 | pvp | Pteropus vampyrus (large flying fox) |
| T06036 | ray | Rousettus aegyptiacus (Egyptian rousette) |
| T06054 | mjv | Manis javanica (Malayan pangolin) |
| T07495 | tod | Talpa occidentalis (Iberian mole) |
| T07854 | sara | Sorex araneus (European shrew) |
| T04351 | lav | Loxodonta africana (African savanna elephant) |
| T05135 | tmu | Trichechus manatus latirostris (Florida manatee) |
| T07872 | dnm | Dasypus novemcinctus (nine-banded armadillo) |
| T01031 | mdo | Monodelphis domestica (gray short-tailed opossum) |
| T07702 | gas | Gracilinanus agilis (agile gracile opossum) |
| T02286 | shr | Sarcophilus harrisii (Tasmanian devil) |
| T05867 | pcw | Phascolarctos cinereus (koala) |
| T01045 | oaa | Ornithorhynchus anatinus (platypus) |
| T01006 | gga | Gallus gallus (chicken) |
| T07365 | pcoc | Phasianus colchicus (Ring-necked pheasant) |
| T01523 | mgp | Meleagris gallopavo (turkey) |
| T04297 | cjo | Coturnix japonica (Japanese quail) |
| T06015 | nmel | Numida meleagris (helmeted guineafowl) |
| T02816 | apla | Anas platyrhynchos (mallard) |
| T04896 | acyg | Anser cygnoides domesticus (swan goose) |
| T07966 | aful | Aythya fuligula (tufted duck) |
| T01082 | tgu | Taeniopygia guttata (zebra finch) |
| T05897 | lsr | Lonchura striata domestica (Bengalese finch) |
| T05755 | scan | Serinus canaria (common canary) |
| T07277 | pmoa | Passer montanus (Eurasian tree sparrow) |
| T07590 | otc | Onychostruthus taczanowskii (white-rumped snowfinch) |
| T07608 | pruf | Pyrgilauda ruficollis (rufous-necked snowfinch) |
| T03755 | gfr | Geospiza fortis (medium ground-finch) |
| T02815 | fab | Ficedula albicollis (collared flycatcher) |
| T02921 | phi | Pseudopodoces humilis (Tibetan ground-tit) |
| T04864 | pmaj | Parus major (Great Tit) |
| T05602 | ccae | Cyanistes caeruleus (blue tit) |
| T03546 | ccw | Corvus cornix (hooded crow) |
| T05887 | etl | Empidonax traillii (willow flycatcher) |
| T07911 | zab | Zonotrichia albicollis (white-throated sparrow) |
| T02856 | fpg | Falco peregrinus (peregrine falcon) |
| T02911 | fch | Falco cherrug (Saker falcon) |
| T02912 | clv | Columba livia (rock pigeon) |
| T05152 | egz | Egretta garzetta (little egret) |
| T05756 | nni | Nipponia nippon (crested ibis) |
| T08325 | plet | Phaethon lepturus (White-tailed tropicbird) |
| T05777 | acun | Athene cunicularia (burrowing owl) |
| T07816 | tala | Tyto alba (Barn owl) |
| T06012 | padl | Pygoscelis adeliae (Adelie penguin) |
| T08023 | achc | Aquila chrysaetos chrysaetos (golden eagle) |
| T04298 | aam | Apteryx mantelli mantelli (North Island brown kiwi) |
| T07573 | arow | Apteryx rowi (Okarito brown kiwi) |
| T07556 | npd | Nothoprocta perdicaria (Chilean tinamou) |
| T07572 | dne | Dromaius novaehollandiae (emu) |
| T02922 | asn | Alligator sinensis (Chinese alligator) |
| T03087 | amj | Alligator mississippiensis (American alligator) |
| T07440 | cpoo | Crocodylus porosus (Australian saltwater crocodile) |
| T07453 | ggn | Gavialis gangeticus (Gharial) |
| T02980 | pss | Pelodiscus sinensis (Chinese soft-shelled turtle) |
| T02989 | cmy | Chelonia mydas (green sea turtle) |
| T04662 | cpic | Chrysemys picta (western painted turtle) |
| T07347 | tst | Trachemys scripta elegans (red-eared slider) |
| T07367 | cabi | Chelonoidis abingdonii (Abingdon island giant tortoise) |
| T07797 | mrv | Mauremys reevesii (Reeves's turtle) |
| T01608 | acs | Anolis carolinensis (green anole) |
| T05000 | pvt | Pogona vitticeps (central bearded dragon) |
| T07740 | sund | Sceloporus undulatus (fence lizard) |
| T03091 | pbi | Python bivittatus (Burmese python) |
| T05763 | pmur | Protobothrops mucrosquamatus (Taiwan habu) |
| T06107 | tsr | Thamnophis sirtalis (common garter snake) |
| T07329 | pgut | Pantherophis guttatus (corn snake) |
| T07701 | vko | Varanus komodoensis (Komodo dragon) |
| T06059 | pmua | Podarcis muralis (common wall lizard) |
| T07275 | zvi | Zootoca vivipara (common lizard) |
| T04299 | gja | Gekko japonicus (Schlegel's Japanese gecko) |
| T08213 | stow | Sphaerodactylus townsendi (Townsend's least gecko) |
| T01010 | xla | Xenopus laevis (African clawed frog) |
| T01011 | xtr | Xenopus tropicalis (tropical clawed frog) |
| T04897 | npr | Nanorana parkeri (Xizang Plateau frog) |
| T07929 | rtem | Rana temporaria (common frog) |
| T07950 | bbuf | Bufo bufo (common toad) |
| T07965 | bgar | Bufo gargarizans (Asiatic toad) |
| T01004 | dre | Danio rerio (zebrafish) |
| T04916 | srx | Sinocyclocheilus rhinocerous |
| T04917 | sanh | Sinocyclocheilus anshuiensis |
| T04918 | sgh | Sinocyclocheilus grahami (golden-line barbel) |
| T05134 | ccar | Cyprinus carpio (common carp) |
| T07313 | caua | Carassius auratus (goldfish) |
| T08155 | pprm | Pimephales promelas (fathead minnow) |
| T08212 | mamb | Megalobrama amblycephala (Wuchang bream) |
| T04658 | ipu | Ictalurus punctatus (channel catfish) |
| T05759 | phyp | Pangasianodon hypophthalmus (striped catfish) |
| T08004 | smeo | Silurus meridionalis (southern catfish) |
| T08119 | tfd | Tachysurus fulvidraco (yellow catfish) |
| T05042 | amex | Astyanax mexicanus (Mexican tetra) |
| T05787 | eee | Electrophorus electricus (electric eel) |
| T02386 | tru | Takifugu rubripes (torafugu) |
| T04346 | tng | Tetraodon nigroviridis (spotted green pufferfish) |
| T04659 | lco | Larimichthys crocea (large yellow croaker) |
| T04920 | ncc | Notothenia coriiceps (black rockcod) |
| T07513 | cgob | Cottoperca gobio |
| T07331 | ely | Epinephelus lanceolatus (giant grouper) |
| T07454 | plep | Plectropomus leopardus (leopard coralgrouper) |
| T07345 | sluc | Sander lucioperca (pikeperch) |
| T07493 | ecra | Etheostoma cragini (Arkansas darter) |
| T07494 | pflv | Perca flavescens (yellow perch) |
| T07457 | gat | Gasterosteus aculeatus (three-spined stickleback) |
| T07626 | ppug | Pungitius pungitius (ninespine stickleback) |
| T07309 | msam | Micropterus salmoides (largemouth bass) |
| T07473 | cud | Cheilinus undulatus (humphead wrasse) |
| T08233 | alat | Acanthopagrus latus (yellowfin seabream) |
| T02814 | mze | Maylandia zebra (zebra mbuna) |
| T06104 | onl | Oreochromis niloticus (Nile tilapia) |
| T07295 | oau | Oreochromis aureus (blue tilapia) |
| T02443 | ola | Oryzias latipes (Japanese medaka) |
| T07439 | oml | Oryzias melastigma (Indian medaka) |
| T02923 | xma | Xiphophorus maculatus (southern platyfish) |
| T05908 | xco | Xiphophorus couchianus (Monterrey platyfish) |
| T07363 | xhe | Xiphophorus hellerii (green swordtail) |
| T05149 | pret | Poecilia reticulata (guppy) |
| T07984 | pfor | Poecilia formosa (Amazon molly) |
| T08005 | plai | Poecilia latipinna (sailfin molly) |
| T08022 | pmei | Poecilia mexicana (shortfin molly) |
| T07758 | gaf | Gambusia affinis (western mosquitofish) |
| T06110 | cvg | Cyprinodon variegatus (sheepshead minnow) |
| T07496 | ctul | Cyprinodon tularosa (White Sands pupfish) |
| T08099 | gmu | Girardinichthys multiradiatus (darkedged splitfin) |
| T05163 | nfu | Nothobranchius furzeri (turquoise killifish) |
| T05608 | kmr | Kryptolebias marmoratus (mangrove rivulus) |
| T06063 | alim | Austrofundulus limnaeus (annual killifish) |
| T08042 | nwh | Nematolebias whitei (Rio pearlfish) |
| T06018 | aoce | Amphiprion ocellaris (clown anemonefish) |
| T04866 | csem | Cynoglossus semilaevis (tongue sole) |
| T06037 | pov | Paralichthys olivaceus (Japanese flounder) |
| T07721 | ssen | Solea senegalensis (Senegalese sole) |
| T07778 | hhip | Hippoglossus hippoglossus (Atlantic halibut) |
| T08308 | hsp | Hippoglossus stenolepis (Pacific halibut) |
| T04895 | lcf | Lates calcarifer (barramundi perch) |
| T05606 | sdu | Seriola dumerili (greater amberjack) |
| T06058 | slal | Seriola lalandi dorsalis (Yellowtail amberjack) |
| T07311 | xgl | Xiphias gladius (swordfish) |
| T04969 | hcq | Hippocampus comes (tiger tail seahorse) |
| T05002 | bpec | Boleophthalmus pectinirostris (great blue-spotted mudskipper) |
| T05607 | malb | Monopterus albus (swamp eel) |
| T08231 | bspl | Betta splendens (Siamese fighting fish) |
| T04363 | sasa | Salmo salar (Atlantic salmon) |
| T05605 | otw | Oncorhynchus tshawytscha (Chinook salmon) |
| T07259 | omy | Oncorhynchus mykiss (rainbow trout) |
| T07892 | ogo | Oncorhynchus gorbuscha (pink salmon) |
| T07952 | one | Oncorhynchus nerka (sockeye salmon) |
| T05762 | salp | Salvelinus sp. IW2-2015 (Arctic char) |
| T07522 | snh | Salvelinus namaycush (lake trout) |
| T04894 | els | Esox lucius (northern pike) |
| T04919 | sfm | Scleropages formosus (Asian bonytongue) |
| T05788 | pki | Paramormyrops kingsleyae |
| T07545 | aang | Anguilla anguilla (European eel) |
| T07349 | loc | Lepisosteus oculatus (spotted gar) |
| T07273 | pspa | Polyodon spathula (Mississippi paddlefish) |
| T07327 | arut | Acipenser ruthenus (sterlet) |
| T02913 | lcm | Latimeria chalumnae (coelacanth) |
| T03088 | cmk | Callorhinchus milii (elephant shark) |
| T06055 | rtp | Rhincodon typus (whale shark) |
Organism group: Vertebrates