KEGG pathway modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: T31003_00010 T31003_01200 T31003_01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: T31003_00010 T31003_01200 T31003_01230 T31003_01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: T31003_00010 T31003_00020 T31003_01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: T31003_00010 T31003_00020 T31003_00620 T31003_00785 T31003_01200 T31003_01210 T31003_01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: T31003_00020 T31003_01200 T31003_01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: T31003_00020 T31003_01200 T31003_01210 T31003_01230 T31003_01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: T31003_00020 T31003_01200 T31003_01210 T31003_01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: T31003_00030 T31003_01200 T31003_01100 T31003_01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: T31003_00030 T31003_01200 T31003_01100 T31003_01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: T31003_00030 T31003_01200 T31003_01230 T31003_01100 T31003_01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: T31003_00030 T31003_00230 T31003_01200 T31003_01230 T31003_01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: T31003_00030 T31003_01200 T31003_01100 T31003_01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:T31003_00040 T31003_00030 T31003_01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:T31003_00040 T31003_00030 T31003_01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:T31003_00052 T31003_01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:T31003_00500 T31003_01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:T31003_00500 T31003_01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:T31003_00520 T31003_01250 T31003_01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:T31003_00520 T31003_00052 T31003_01250 T31003_01100]
M00012 Glyoxylate cycle [PATH:T31003_00630 T31003_01200 T31003_01100 T31003_01110]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:T31003_00280 T31003_00630 T31003_00640 T31003_01200 T31003_01100]
M00130 Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4 [PATH:T31003_00562 T31003_01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH:T31003_00730 T31003_01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:T31003_00740 T31003_01240 T31003_01100 T31003_01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:T31003_00750 T31003_01240 T31003_01100]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:T31003_00750 T31003_01240 T31003_01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:T31003_00760 T31003_01240 T31003_01100]
M00912 NAD biosynthesis, tryptophan => quinolinate => NAD [PATH:T31003_00380 T31003_00760 T31003_01240 T31003_01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:T31003_00770 T31003_01240 T31003_01100 T31003_01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:T31003_00770 T31003_01240 T31003_01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:T31003_00780 T31003_01240 T31003_01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:T31003_00780 T31003_01240 T31003_01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:T31003_00785 T31003_01240 T31003_01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:T31003_00790 T31003_00670 T31003_01240 T31003_01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:T31003_00790 T31003_01240 T31003_01100]
M00140 C1-unit interconversion, prokaryotes [PATH:T31003_00670 T31003_01240 T31003_01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:T31003_00860 T31003_01240 T31003_01100 T31003_01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:T31003_00860 T31003_01240 T31003_01100 T31003_01110]
M00925 Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH:T31003_00860 T31003_01240 T31003_01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:T31003_00130 T31003_01240 T31003_01100 T31003_01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00627 beta-Lactam resistance, Bla system [PATH:T31003_01501]
M00745 Imipenem resistance, repression of porin OprD
M00641 Multidrug resistance, efflux pump MexEF-OprN
M00642 Multidrug resistance, efflux pump MexJK-OprM
M00649 Multidrug resistance, efflux pump AdeABC [PATH:T31003_01501]
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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