|
KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: car00010 car01200 car01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: car00010 car01200 car01230 car01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: car00010 car00020 car01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: car00010 car00020 car00620 car00785 car01200 car01210 car01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: car00020 car01200 car01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: car00020 car01200 car01210 car01230 car01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: car00020 car01200 car01210 car01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: car00030 car01200 car01100 car01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose-6P => ribulose-5P [PATH: car00030 car01200 car01100 car01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose-6P => ribose-5P [PATH: car00030 car01200 car01230 car01100 car01120]
M00580 Pentose phosphate pathway, archaea, fructose-6P => ribose-5P [PATH: car00030 car01200 car01230 car01100 car01120]
M00005 PRPP biosynthesis, ribose-5P => PRPP [PATH: car00030 car00230 car01200 car01230 car01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: car00030 car01200 car01100 car01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde-3P [PATH:car00040 car00030 car01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde-3P [PATH:car00040 car00030 car01100]
M00081 Pectin degradation [PATH:car00040 car01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:car00052 car01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:car00052 car01100]
M00114 Ascorbate biosynthesis, plants, fructose-6P => ascorbate [PATH:car00051 car01240 car01100 car01110]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:car01100 car01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:car00500 car01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:car00500 car01100]
M00565 Trehalose biosynthesis, D-glucose-1P => trehalose [PATH:car00500 car01100 car01110]
M00012 Glyoxylate cycle [PATH:car00630 car01200 car01100 car01110]
M00532 Photorespiration [PATH:car00630 car01200 car01100 car01110]
M00982 Methylcitrate cycle [PATH:car00640 car00020 car01200 car01100 car01120]
M00132 Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH:car00562 car01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Nucleotide sugar biosynthesis
M00892 UDP-GlcNAc biosynthesis, eukaryotes, Fru-6P => UDP-GlcNAc [PATH: car00520 car01250 car01100]
M00909 UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc [PATH: car00520 car01250 car01100]
M01003 UDP-GlcNAc biosynthesis, GlcNAc => UDP-GlcNAc [PATH: car00520 car01250 car01100]
M00996 UDP-MurNAc biosynthesis, anhMurNAc => UDP-MurNAc [PATH: car00520 car01250 car01100 car01100]
M00995 UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc [PATH: car00520 car01250 car01100]
M00549 UDP-Glc biosynthesis, Glc => UDP-Glc [PATH: car00520 car01250 car01100]
M01004 UDP-Galf biosynthesis, UDP-Glc => UDP-Galf [PATH: car00520 car00052 car01250 car01100]
M00998 UDP-L-Ara biosynthesis, L-Ala => UDP-L-Ala [PATH: car00520 car01250 car01100]
M00997 UDP-Xyl/L-Ara biosynthesis, UDP-Glc => UDP-Xyl => UDP-L-Ala [PATH: car00520 car01250 car01100]
M00994 UDP-GlcA biosynthesis, myo-inositol => GlcA => UDP-GlcA [PATH: car00562 car00520 car00040 car01250 car01100]
M00999 UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA [PATH: car00520 car01250 car01100]
M00554 UDP-Gal biosynthesis, Gal => UDP-Gal [PATH: car00520 car00052 car01250 car01100]
M01000 GDP-Man biosynthesis, Fru-6P => GDP-Man [PATH: car00520 car00051 car01250 car01100]
M01015 GDP-Man biosynthesis, Man => GDP-Man [PATH: car00520 car00051 car01250 car01100]
M01001 GDP-L-Fuc biosynthesis, L-Fuc => GDP-L-Fuc [PATH: car00520 car01250 car01100]
M01035 UDP-ManNAc3NAcA biosynthesis, UDP-GlcNAc => UDP-ManNAc3NAcA [PATH: car00541 car01250 car01100]
M00923 UDP-L-FucNAc biosynthesis, UDP-GlcNAc => UDP-L-FucNAc [PATH: car00541 car01250 car01100]
M01007 CMP-Pse5Ac7Ac biosynthesis, UDP-GlcNAc => CMP-Pse5Ac7Ac [PATH: car00541 car01250 car01100]
M01010 UDP-BacNAc4NAc biosynthesis, UDP-GlcNAc => UDP-BacNAc4NAc [PATH: car00541 car01250 car01100]
M01011 CMP-Leg5Ac7Ac biosynthesis, UDP-BacNAc4NAc => CMP-Leg5Ac7Ac [PATH: car00541 car01250 car01100]
M00063 CMP-KDO biosynthesis, ribulose-5P => CMP-KDO [PATH: car00541 car01250 car01100]
M01014 UDP-ManNAcA biosynthesis, UDP-GlcNAc => UDP-ManNAcA [PATH: car00541 car01250 car01100]
M01028 GDP-DDmanHep biosynthesis, sedoheptulose-7P => GDP-DDmanHep [PATH: car00541 car01250 car01100]
M00064 ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep [PATH: car00541 car01250 car01100]
M01021 UDP-L-Rha biosynthesis, UDP-Glc => UDP-L-Rha [PATH: car00541 car01250 car01100]
M00761 Und-P-alpha-L-Ara4N biosynthesis, UDP-Glc => UDP-L-Ara4FN => Und-P-alpha-L-Ara4N [PATH: car00541 car01250 car01100]
M00793 dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha [PATH: car00521 car00523 car00541 car01250 car01100 car01110]
M01025 dTDP-D-Fuc4NAc biosynthesis, Glc-1P => dTDP-D-Fuc4NAc [PATH: car00541 car01250 car01100]
M01016 GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc [PATH: car00541 car00051 car01250 car01100]
M01018 GDP-D-Rha biosynthesis, GDP-Man => GDP-D-Rha [PATH: car00541 car00051 car01250 car01100]
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Other polysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: car00730 car01240 car01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: car00730 car01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: car00740 car01240 car01100 car01110]
M00124 Pyridoxal phosphate biosynthesis, erythrose-4P => pyridoxal-P [PATH: car00750 car01240 car01100]
M00916 Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH: car00750 car01240 car01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: car00760 car01240 car01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: car00770 car01240 car01100 car01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: car00770 car01240 car01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: car00780 car01240 car01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: car00780 car01240 car01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: car00785 car01240 car01100]
M00882 Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH: car00785 car01240 car01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: car00790 car00670 car01240 car01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: car00790 car01240 car01100]
M00988 PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine [PATH: car00790 car01100]
M00140 C1-unit interconversion, prokaryotes [PATH: car00670 car01240 car01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: car00860 car01240 car01100 car01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: car00860 car01240 car01100 car01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH: car00860 car01240 car01100]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH: car00860 car01240 car01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: car00860 car01240 car01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: car00130 car01240 car01100 car01110]
M00989 Ubiquinone biosynthesis, O2-independent, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: car00130 car01240 car01100 car01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: car00130 car01240 car01100 car01110]
M00931 Menaquinone biosynthesis, modified futalosine pathway [PATH: car00130 car01240 car01100]
M00932 Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol [PATH: car00130 car01240 car01100 car01110]
M00112 Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol [PATH: car00130 car01240 car01100 car01110]
M00933 Plastoquinone biosynthesis, homogentisate + solanesyl-PP => plastoquinol [PATH: car00130 car01240 car01100 car01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Terpenoid biosynthesis
M00097 Lycopene biosynthesis, geranylgeranyl-PP => lycopene [PATH:car00906 car01100 car01110]
M01040 Lutein biosynthesis, plants, lycopene => lutein [PATH:car00906 car01100 car01110]
M01045 Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin [PATH:car00906 car01100 car01110]
M01046 Xanthophyll cycle [PATH:car00906 car01100 car01110]
M00372 Abscisic acid biosynthesis, plants, 9'-cis-neoxanthin/9-cis-violaxanthin => abscisic acid [PATH:car00906 car01100 car01110]
M00371 Castasterone biosynthesis, plants, campesterol => castasterone [PATH:car01100 car01110]
M00927 Gibberellin A12 biosynthesis, plants, GAPP => GA12 [PATH:car01100 car01110]
M00928 Gibberellin A4/A1 biosynthesis, plants, GA12/GA53 => GA4/GA1 [PATH:car01100 car01110]
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Biosynthesis of other compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00851 Carbapenem resistance [PATH: car01501]
M00627 beta-Lactam resistance, Bla system [PATH: car01501]
M00696 Multidrug resistance, efflux pump AcrEF-TolC
M00697 Multidrug resistance, efflux pump MdtEF-TolC
M00698 Multidrug resistance, efflux pump BpeEF-OprC
Plant pathogenicity
Symbiosis
Module set
|
|