KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: eko00010 eko01200 eko01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: eko00010 eko01200 eko01230 eko01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: eko00010 eko00020 eko01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: eko00010 eko00020 eko00620 eko00785 eko01200 eko01210 eko01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: eko00020 eko01200 eko01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: eko00020 eko01200 eko01210 eko01230 eko01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: eko00020 eko01200 eko01210 eko01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: eko00030 eko01200 eko01100 eko01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: eko00030 eko01200 eko01100 eko01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: eko00030 eko01200 eko01230 eko01100 eko01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: eko00030 eko00230 eko01200 eko01230 eko01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: eko00030 eko01200 eko01100 eko01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:eko00040 eko00030 eko01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:eko00040 eko00030 eko01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:eko00052 eko01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:eko00052 eko01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:eko00500 eko01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:eko00500 eko01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:eko00520 eko01250 eko01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:eko00520 eko00052 eko01250 eko01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:eko00520 eko01250 eko01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:eko00520 eko01100]
M00012 Glyoxylate cycle [PATH:eko00630 eko01200 eko01100 eko01110]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: eko00730 eko01240 eko01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: eko00730 eko01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: eko00740 eko01240 eko01100 eko01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: eko00750 eko01240 eko01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: eko00760 eko01240 eko01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: eko00770 eko01240 eko01100 eko01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: eko00770 eko01240 eko01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: eko00780 eko01240 eko01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: eko00780 eko01240 eko01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: eko00785 eko01240 eko01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: eko00790 eko00670 eko01240 eko01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: eko00790 eko01240 eko01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: eko00860 eko01240 eko01100 eko01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: eko00860 eko01240 eko01100 eko01110]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: eko00130 eko01240 eko01100 eko01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: eko00130 eko01240 eko01100 eko01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00696 Multidrug resistance, efflux pump AcrEF-TolC
M00697 Multidrug resistance, efflux pump MdtEF-TolC
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00616 Sulfate-sulfur assimilation
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