KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: ent00010 ent01200 ent01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: ent00010 ent01200 ent01230 ent01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: ent00010 ent00020 ent01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: ent00010 ent00020 ent00620 ent00785 ent01200 ent01210 ent01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: ent00020 ent01200 ent01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: ent00020 ent01200 ent01210 ent01230 ent01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: ent00020 ent01200 ent01210 ent01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: ent00030 ent01200 ent01100 ent01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: ent00030 ent01200 ent01100 ent01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: ent00030 ent01200 ent01230 ent01100 ent01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: ent00030 ent00230 ent01200 ent01230 ent01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: ent00030 ent01200 ent01100 ent01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:ent00040 ent00030 ent01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:ent00040 ent00030 ent01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:ent00052 ent01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:ent00052 ent01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:ent00053 ent01100 ent01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:ent00500 ent01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:ent00500 ent01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:ent00500 ent01100 ent01110]
M00012 Glyoxylate cycle [PATH:ent00630 ent01200 ent01100 ent01110]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Nucleotide sugar biosynthesis
M00909 UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc [PATH:ent00520 ent01250 ent01100]
M00996 UDP-MurNAc biosynthesis, anhMurNAc => UDP-MurNAc [PATH:ent00520 ent01250 ent01100 ent01100]
M00995 UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc [PATH:ent00520 ent01250 ent01100]
M00549 UDP-Glc biosynthesis, Glc => UDP-Glc [PATH:ent00520 ent01250 ent01100]
M00999 UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA [PATH:ent00520 ent00053 ent01250 ent01100]
M00554 UDP-Gal biosynthesis, Gal => UDP-Gal [PATH:ent00520 ent00052 ent01250 ent01100]
M01000 GDP-Man biosynthesis, Fru-6P => GDP-Man [PATH:ent00520 ent01250 ent01100]
M01009 UDP-QuiNAc biosynthesis, UDP-GlcNAc => UDP-QuiNAc [PATH:ent00541]
M00063 CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO [PATH:ent00541 ent01250 ent01100]
M01014 UDP-ManNAcA biosynthesis, UDP-GlcNAc => UDP-ManNAcA [PATH:ent00541]
M00064 ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep [PATH:ent00541 ent01250 ent01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:ent00541 ent01100]
M00793 dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha [PATH:ent00521 ent00523 ent00541 ent01250 ent01100 ent01110]
M01016 GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc [PATH:ent00541]
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Other polysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: ent00730 ent01240 ent01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: ent00730 ent01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: ent00740 ent01240 ent01100 ent01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: ent00750 ent01240 ent01100]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH: ent00750 ent01240 ent01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: ent00760 ent01240 ent01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: ent00770 ent01240 ent01100 ent01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: ent00770 ent01240 ent01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: ent00780 ent01240 ent01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: ent00780 ent01240 ent01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: ent00785 ent01240 ent01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: ent00790 ent00670 ent01240 ent01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: ent00790 ent01240 ent01100]
M00988 PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine [PATH: ent00790 ent01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: ent00860 ent01240 ent01100 ent01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: ent00860 ent01240 ent01100 ent01110]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH: ent00860 ent01240 ent01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: ent00860 ent01240 ent01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: ent00130 ent01240 ent01100 ent01110]
M00989 Ubiquinone biosynthesis, O2-independent, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: ent00130 ent01240 ent01100 ent01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: ent00130 ent01240 ent01100 ent01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00696 Multidrug resistance, efflux pump AcrEF-TolC
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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