KEGG Modules

Carbohydrate metabolism
Central carbohydrate metabolism
M00002 Glycolysis, core module involving three-carbon compounds [PATH:hsem00010 hsem01200 hsem01230 hsem01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH:hsem00010 hsem00020 hsem01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:hsem00010 hsem00020 hsem00620 hsem00785 hsem01200 hsem01210 hsem01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:hsem00020 hsem01200 hsem01210 hsem01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH:hsem00030 hsem01200 hsem01100 hsem01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:hsem00030 hsem01200 hsem01100 hsem01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:hsem00030 hsem01200 hsem01230 hsem01100 hsem01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH:hsem00030 hsem00230 hsem01200 hsem01230 hsem01100]

Other carbohydrate metabolism
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:hsem00052 hsem01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:hsem00500 hsem01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:hsem00520 hsem00052 hsem01250 hsem01100]

Energy metabolism
Carbon fixation
M00168 CAM (Crassulacean acid metabolism), dark [PATH:hsem00620 hsem00710 hsem01200 hsem01100 hsem01120]
M00579 Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:hsem00430 hsem00620 hsem00720 hsem01200 hsem01100 hsem01120]

Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
M00150 Fumarate reductase, prokaryotes [PATH:hsem00190 hsem01100]
M00157 F-type ATPase, prokaryotes and chloroplasts [PATH:hsem00190 hsem01100]

Lipid metabolism
Fatty acid metabolism
M00082 Fatty acid biosynthesis, initiation [PATH:hsem00061 hsem01212 hsem01100]
M00083 Fatty acid biosynthesis, elongation [PATH:hsem00061 hsem01212 hsem01100]
M00086 beta-Oxidation, acyl-CoA synthesis [PATH:hsem00061 hsem01212 hsem01100]

Sterol biosynthesis
Lipid metabolism
M00093 Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:hsem00564 hsem01100]

Nucleotide metabolism
Purine metabolism
M00048 De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:hsem00230 hsem01100]
M00049 Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:hsem00230 hsem01232 hsem01240 hsem01100]
M00050 Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:hsem00230 hsem01232 hsem01100]
M00053 Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:hsem00230 hsem00240 hsem01232 hsem01100]

Pyrimidine metabolism
M00052 Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:hsem00240 hsem01232 hsem01240 hsem01100]
M00938 Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:hsem00240 hsem01232 hsem01100]

Amino acid metabolism
Serine and threonine metabolism
M00020 Serine biosynthesis, glycerate-3P => serine [PATH:hsem00260 hsem00680 hsem01200 hsem01230 hsem01100]
M00018 Threonine biosynthesis, aspartate => homoserine => threonine [PATH:hsem00260 hsem01230 hsem01100 hsem01110]

Cysteine and methionine metabolism
M00021 Cysteine biosynthesis, serine => cysteine [PATH:hsem00270 hsem00920 hsem01200 hsem01230 hsem01100 hsem01110]
M00017 Methionine biosynthesis, aspartate => homoserine => methionine [PATH:hsem00270 hsem01230 hsem01100]

Branched-chain amino acid metabolism
M00019 Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:hsem00290 hsem00770 hsem01210 hsem01230 hsem01100 hsem01110]
M00570 Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:hsem00290 hsem01230 hsem01100]
M00432 Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:hsem00290 hsem01210 hsem01230 hsem01100 hsem01110]

Lysine metabolism
Arginine and proline metabolism
M00844 Arginine biosynthesis, ornithine => arginine [PATH:hsem00220 hsem01230 hsem01100]
M00015 Proline biosynthesis, glutamate => proline [PATH:hsem00330 hsem01230 hsem01100]

Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
M00022 Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:hsem00400 hsem01230 hsem01100 hsem01110]
M00023 Tryptophan biosynthesis, chorismate => tryptophan [PATH:hsem00400 hsem01230 hsem01100 hsem01110]

Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
M00060 KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:hsem00540 hsem01100]
M00063 CMP-KDO biosynthesis [PATH:hsem00540 hsem01250 hsem01100]
M00064 ADP-L-glycero-D-manno-heptose biosynthesis [PATH:hsem00540 hsem01250 hsem01100]

Other polysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:hsem00770 hsem01240 hsem01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:hsem00780 hsem01240 hsem01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:hsem00780 hsem01240 hsem01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:hsem00785 hsem01240 hsem01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:hsem00790 hsem00670 hsem01240 hsem01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:hsem00790 hsem01240 hsem01100]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:hsem00860 hsem01240 hsem01100 hsem01110]

Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Aromatics degradation

Gene set
Pathogenicity
Drug resistance
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity