KEGG Modules

Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:plj00010 plj01200 plj01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH:plj00010 plj01200 plj01230 plj01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH:plj00010 plj00020 plj01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:plj00010 plj00020 plj00620 plj00785 plj01200 plj01210 plj01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH:plj00020 plj01200 plj01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:plj00020 plj01200 plj01210 plj01230 plj01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:plj00020 plj01200 plj01210 plj01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH:plj00030 plj01200 plj01100]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:plj00030 plj01200 plj01100]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:plj00030 plj01200 plj01230 plj01100]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH:plj00030 plj00230 plj01200 plj01230 plj01100]

Other carbohydrate metabolism
M00630 D-Galacturonate degradation (fungi), D-galacturonate => glycerol [PATH:plj00040 plj01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:plj00052 plj01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:plj00500 plj01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:plj00500 plj01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:plj00520 plj01250 plj01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:plj00520 plj00052 plj01250 plj01100]
M00892 UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH:plj00520 plj01250 plj01100]
M00012 Glyoxylate cycle [PATH:plj00630 plj01200 plj01100 plj01110]

Energy metabolism
Carbon fixation
Methane metabolism
M00344 Formaldehyde assimilation, xylulose monophosphate pathway [PATH:plj00680 plj01200 plj01100]

Nitrogen metabolism
M00531 Assimilatory nitrate reduction, nitrate => ammonia [PATH:plj00910 plj01100]

Sulfur metabolism
M00176 Assimilatory sulfate reduction, sulfate => H2S [PATH:plj00920 plj01100]

Photosynthesis
ATP synthesis
M00143 NADH dehydrogenase (ubiquinone) Fe-S protein/flavoprotein complex, mitochondria [PATH:plj00190 plj01100]
M00148 Succinate dehydrogenase (ubiquinone) [PATH:plj00190 plj01100]

Lipid metabolism
Fatty acid metabolism
M00082 Fatty acid biosynthesis, initiation [PATH:plj00061 plj01212 plj01100]
M00083 Fatty acid biosynthesis, elongation [PATH:plj00061 plj01212 plj01100]
M00415 Fatty acid elongation in endoplasmic reticulum [PATH:plj00062 plj01040 plj01212 plj01100]
M00086 beta-Oxidation, acyl-CoA synthesis [PATH:plj00061 plj00071 plj01212 plj01100]
M00087 beta-Oxidation [PATH:plj00071 plj01212 plj01100]

Sterol biosynthesis
M00102 Ergocalciferol biosynthesis, FPP => ergosterol/ergocalciferol [PATH:plj00100 plj01100 plj01110]

Lipid metabolism
M00089 Triacylglycerol biosynthesis [PATH:plj00561 plj01100]
M00098 Acylglycerol degradation [PATH:plj00561 plj01100]
M00091 Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:plj00564 plj01100]
M00092 Phosphatidylethanolamine (PE) biosynthesis, ethanolamine => PE [PATH:plj00564 plj01100]
M00093 Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:plj00564 plj01100]
M00094 Ceramide biosynthesis [PATH:plj00600 plj01100]
M00099 Sphingosine biosynthesis [PATH:plj00600 plj01100]
M00100 Sphingosine degradation [PATH:plj00600 plj01100]

Nucleotide metabolism
Purine metabolism
M00048 De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:plj00230 plj01100]
M00049 Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:plj00230 plj01232 plj01240 plj01100]
M00050 Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:plj00230 plj01232 plj01100]
M00053 Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:plj00230 plj00240 plj01232 plj01100]

Pyrimidine metabolism
M00051 De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:plj00240 plj01240 plj01100]
M00052 Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:plj00240 plj01232 plj01240 plj01100]

Amino acid metabolism
Serine and threonine metabolism
M00018 Threonine biosynthesis, aspartate => homoserine => threonine [PATH:plj00260 plj01230 plj01100 plj01110]
M00621 Glycine cleavage system [PATH:plj00260 plj00630 plj00785 plj01200 plj01100]

Cysteine and methionine metabolism
M00338 Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:plj00260 plj00270 plj01230 plj01100]
M00017 Methionine biosynthesis, aspartate => homoserine => methionine [PATH:plj00270 plj01230 plj01100]
M00034 Methionine salvage pathway [PATH:plj00270 plj01100]
M00035 Methionine degradation [PATH:plj00270 plj01100]

Branched-chain amino acid metabolism
M00019 Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:plj00290 plj00770 plj01210 plj01230 plj01100 plj01110]
M00570 Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:plj00290 plj01230 plj01100]
M00432 Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:plj00290 plj01210 plj01230 plj01100 plj01110]
M00036 Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:plj00280 plj01100]

Lysine metabolism
M00030 Lysine biosynthesis, AAA pathway, 2-oxoglutarate => 2-aminoadipate => lysine [PATH:plj00300 plj01230 plj01100]
M00433 Lysine biosynthesis, 2-oxoglutarate => 2-oxoadipate [PATH:plj00300 plj01210 plj01230 plj01100]

Arginine and proline metabolism
M00844 Arginine biosynthesis, ornithine => arginine [PATH:plj00220 plj01230 plj01100]
M00015 Proline biosynthesis, glutamate => proline [PATH:plj00330 plj01230 plj01100]

Polyamine biosynthesis
M00134 Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:plj00330 plj01100]

Histidine metabolism
M00026 Histidine biosynthesis, PRPP => histidine [PATH:plj00340 plj01230 plj01100 plj01110]

Aromatic amino acid metabolism
M00022 Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:plj00400 plj01230 plj01100 plj01110]
M00023 Tryptophan biosynthesis, chorismate => tryptophan [PATH:plj00400 plj01230 plj01100 plj01110]
M00024 Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:plj00400 plj01230 plj01100 plj01110]
M00025 Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:plj00400 plj01230 plj01100]
M00044 Tyrosine degradation, tyrosine => homogentisate [PATH:plj00350 plj01100]

Other amino acid metabolism
M00027 GABA (gamma-Aminobutyrate) shunt [PATH:plj00250 plj00650 plj01100]
M00118 Glutathione biosynthesis, glutamate => glutathione [PATH:plj00480 plj01240 plj01100]

Glycan metabolism
Glycan biosynthesis
M00072 N-glycosylation by oligosaccharyltransferase [PATH:plj00510 plj00513 plj01100]
M00073 N-glycan precursor trimming [PATH:plj00510 plj01100]

Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Other polysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00898 Thiamine biosynthesis, pyridoxal-5P => TMP/thiamine/TPP [PATH:plj00730 plj01240 plj01100]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:plj00750 plj01240 plj01100]
M00912 NAD biosynthesis, tryptophan => quinolinate => NAD [PATH:plj00380 plj00760 plj01240 plj01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:plj00780 plj01240 plj01100]
M00882 Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:plj00785 plj01240 plj01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:plj00790 plj01240 plj01100]
M00141 C1-unit interconversion, eukaryotes [PATH:plj00670 plj01240 plj01100]
M00868 Heme biosynthesis, animals and fungi, glycine => heme [PATH:plj00860 plj01240 plj01100 plj01110]
M00128 Ubiquinone biosynthesis, eukaryotes, 4-hydroxybenzoate + polyprenyl-PP => ubiquinol [PATH:plj00130 plj01240 plj01100]

Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
M00095 C5 isoprenoid biosynthesis, mevalonate pathway [PATH:plj00900 plj01100 plj01110]
M00367 C10-C20 isoprenoid biosynthesis, non-plant eukaryotes [PATH:plj00900 plj01100 plj01110]

Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Aromatics degradation

Gene set
Pathogenicity
Drug resistance
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation