Target databases: Pathway, Brite hierarchy, Module

Search against:    Enter: map, ko, ec, rn, hsadd, or

Primary ID:   (Outside IDs for organism-specific pathways only)

Enter objects one per line followed by bgcolor, fgcolor:
Examples:
Or upload file:
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Include aliases

Use uncolored diagrams

Search pathways containing all the objects (AND search)




Search&Color Pathway is an advanced version of the integrated KEGG mapping tool, where given objects (genes, proteins, compounds, glycans, reactions, drugs, etc.) are searched against KEGG pathway maps, Brite hirarches and KEGG modules, and found objects are marked in any background and foreground colors (bgcolor and fgcolor). The objects in different types of databases are specified by the following KEGG identifiers and aliases.

Database Prefix Type KEGG identifier Alias
Pathway map Reference pathway
- metabolic
K/R/EC numbers
C/G/D numbers
KO alias
map Reference pathway
- non-metabolic
K number
C/G/D numbers
KO alias
ko Reference pathway (KO) K number
C/G/D numbers
KO alias
EC numbers
ec Reference pathway (EC) EC number
C/G/D numbers
rn Reference pathway (Reaction) R number
C/G/D numbers
RC number
org Organism-specific pathway gene identifier
C/G/D numbers
NCBI-GeneID†
NCBI-gi†
UniProt ID†
gene alias
K/EC numbers
Brite br Reference hierarchy (BR) C/G/D/E/R numbers
KEGG organism code
ko Reference hierarchy (KO) K number
org Organism-specific hierarchy gene identifier
Module ko Reference modules K number
C/R numbers
KO alias
EC number
org Organism-specific modules gene identifier
C/R numbers
gene alias
K number
EC number

† For organism-specific pathways, the NCBI and UniProt identifiers may also be used.


Last updated: July 1, 2019