Search common motifs in selected sequences


  
Motifs : pf:Caerin_1
 pf:DNA_ligase_A_CATP dependent DNA ligase C terminal region
 pf:DNA_ligase_A_MATP dependent DNA ligase domain
 pf:DNA_ligase_C
 pf:DNA_ligase_OB_2DNA ligase OB-like domain
 pf:DNA_primase_SDNA primase small subunit
 pf:DUF4232Protein of unknown function (DUF4232)
 pf:DUF4604Domain of unknown function (DUF4604)
 pf:DUF5824
 pf:FAD-oxidase_CFAD linked oxidases, C-terminal domain
 pf:FISTFIST N domain
 pf:HC2Histone H1-like nucleoprotein HC2
 pf:LigD_NDNA polymerase Ligase (LigD)
 pf:LigD_Prim-Pol
 pf:NdhMCyanobacterial and plastid NDH-1 subunit M
 pf:RNA_ligaseRNA ligase
 pf:RipplyTranscription Regulator
 pf:UvrA_inter
 pf:mRNA_cap_enzymemRNA capping enzyme, catalytic domain

atf:Ach5_43430 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

agr:AGROH133_09757 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

ata:AWN88_02590 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

atu:Atu4632 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:Ripply pf:LigD_Prim-Pol pf:DNA_primase_S

rpha:AMC79_CH00655 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

rec:RHECIAT_CH0000692 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

pye:A6J80_22380 pf:LigD_N pf:HC2 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

rhl:LPU83_2814 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

nao:Y958_30480 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

pamn:pAMV3p0281 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

aak:AA2016_6337 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

pht:BLM14_01395 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

shz:shn_27290 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

sfd:USDA257_c16580 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol

sino:SS05631_b61200 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

paru:CYR75_01430 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

same:SAMCFNEI73_pC0667 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

rhi:NGR_b04710 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol

rtr:RTCIAT899_PC09420 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol

meso:BSQ44_02815 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

sno:Snov_0819 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

mes:Meso_1150 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

ngl:RG1141_CH32250 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

rht:NT26_2902 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

ngg:RG540_CH33090 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

msc:BN69_1443 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

vgo:GJW-30_1_00121 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

agc:BSY240_2160 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

azc:AZC_1006 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

sphj:BSL82_05400 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

oah:DR92_3927 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

oan:Oant_4315 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

gdj:Gdia_2239 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

gdi:GDI0169 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

geh:HYN69_13965 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

rhn:AMJ98_CH00651 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:NdhM pf:DNA_primase_S

rhx:AMK02_CH00654 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:NdhM pf:DNA_primase_S

ret:RHE_CH00617 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:NdhM pf:DNA_primase_S

rel:REMIM1_CH00627 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:NdhM pf:DNA_primase_S

moc:BB934_16235 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

rva:Rvan_0633 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol

phr:C6569_04930 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

bop:AXW83_17900 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

mlo:mll4606 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

mop:Mesop_0815 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

mln:A9174_03965 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

mci:Mesci_0783 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

mesw:A9K65_004035 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

mamo:A6B35_04445 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

mam:Mesau_00823 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

neo:CYG48_11850 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

bid:Bind_0382 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

lha:LHA_0995 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:UvrA_inter pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

pls:VT03_22120 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol

aca:ACP_3506 pf:LigD_N pf:DUF4604 pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol

llg:44548918_01913 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:UvrA_inter pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S pf:FAD-oxidase_C

aex:Astex_1372 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:Caerin_1 pf:DNA_primase_S

nmv:NITMOv2_2657 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S pf:FAD-oxidase_C

avi:Avi_8017 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

eah:FA04_28305 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

brad:BF49_4877 pf:LigD_N pf:DUF4232 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

brk:CWS35_34490 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol

bvv:BHK69_13460 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol

sch:Sphch_2999 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

daf:Desaf_0308 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

hse:Hsero_2271 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

hsz:ACP92_11350 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

brc:BCCGELA001_09220 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

mcg:GL4_0154 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_ligase_C pf:LigD_Prim-Pol pf:DNA_primase_S

sphm:G432_04400 pf:LigD_N pf:DNA_ligase_A_M pf:FIST pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

rir:BN877_p0677 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol

sva:SVA_1768 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

rlb:RLEG3_09760 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol

bja:bll6773 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

bjp:RN69_12895 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

bju:BJ6T_26450 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

cak:Caul_1769 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

six:BSY16_4675 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol

rhk:Kim5_PC00578 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol

rhv:BA939_19590 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

rei:IE4771_PD00652 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol

nha:Nham_3907 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

rlt:Rleg2_5705 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol

rep:IE4803_PC00640 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol

rlg:Rleg_5341 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol

pzu:PHZ_c3259 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol

rlu:RLEG12_02295 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol

rle:pRL120229 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol

cse:Cseg_3113 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol

bot:CIT37_20760 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

splk:AV944_04690 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:DNA_ligase_C pf:LigD_Prim-Pol pf:DNA_primase_S

ssan:NX02_27130 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

vpe:Varpa_0532 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

bra:BRADO5823 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DUF5824 pf:DNA_ligase_A_C pf:LigD_Prim-Pol

cuh:BJN34_34075 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

lok:Loa_02538 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:UvrA_inter pf:DNA_ligase_A_C pf:DNA_ligase_OB_2 pf:LigD_Prim-Pol pf:DNA_primase_S

rga:RGR602_PC00617 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol


aol:S58_17960 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:LigD_Prim-Pol

nja:NSJP_1173 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

rpt:Rpal_4171 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:LigD_Prim-Pol