Search common motifs in selected sequences


  
Motifs : pf:2-Hacid_dhD-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
 pf:2-Hacid_dh_CD-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
 pf:3Beta_HSD3-beta hydroxysteroid dehydrogenase/isomerase family
 pf:3HCDH_N3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
 pf:4HB_MCP_1Four helix bundle sensory module for signal transduction
 pf:AAAATPase family associated with various cellular activities (AAA)
 pf:AAA_14AAA domain
 pf:AAA_15AAA ATPase domain
 pf:AAA_16AAA ATPase domain
 pf:AAA_21AAA domain, putative AbiEii toxin, Type IV TA system
 pf:AAA_22AAA domain
 pf:AAA_23AAA domain
 pf:AAA_29P-loop containing region of AAA domain
 pf:AAA_6Hydrolytic ATP binding site of dynein motor region D1
 pf:AAA_7P-loop containing dynein motor region D3
 pf:AAA_8P-loop containing dynein motor region D4
 pf:AAA_9ATP-binding dynein motor region D5
 pf:AAA_lid_1
 pf:AAA_lid_11
 pf:ABC1ABC1 family
 pf:ABC_tranABC transporter
 pf:ADD_DNMT3
 pf:ADH_NAlcohol dehydrogenase GroES-like domain
 pf:ADH_zinc_NZinc-binding dehydrogenase
 pf:ADH_zinc_N_2Zinc-binding dehydrogenase
 pf:AP2AP2 domain
 pf:ARIDARID/BRIGHT DNA binding domain
 pf:ATG17_like
 pf:ATPase_2ATPase domain predominantly from Archaea
 pf:Acyl-CoA_ox_NAcyl-coenzyme A oxidase N-terminal
 pf:AdoHcyase_NADS-adenosyl-L-homocysteine hydrolase, NAD binding domain
 pf:AlaDh_PNT_CAlanine dehydrogenase/PNT, C-terminal domain
 pf:AldedhAldehyde dehydrogenase family
 pf:Aldo_ket_redAldo/keto reductase family
 pf:Alginate_expAlginate export
 pf:Amidohydro_1Amidohydrolase family
 pf:Amidohydro_3Amidohydrolase family
 pf:Aminotran_1_2Aminotransferase class I and II
 pf:AnkAnkyrin repeat
 pf:Ank_2Ankyrin repeats (3 copies)
 pf:Ank_3Ankyrin repeat
 pf:Ank_4Ankyrin repeats (many copies)
 pf:Ank_5Ankyrin repeats (many copies)
 pf:ApbAKetopantoate reductase PanE/ApbA
 pf:AphA_likePutative AphA-like transcriptional regulator
 pf:ApolipoproteinApolipoprotein A1/A4/E domain
 pf:Asp_proteaseAspartyl protease
 pf:Asp_protease_2Aspartyl protease
 pf:Beta_elim_lyaseBeta-eliminating lyase
 pf:Bro-NBRO family, N-terminal domain
 pf:C1qC1q domain
 pf:CD225Interferon-induced transmembrane protein
 pf:COA2Cytochrome C oxidase assembly factor 2
 pf:Calc_CGRP_IAPPCalcitonin / CGRP / IAPP family
 pf:CarD_TRCF_RID
 pf:Carbpep_Y_NCarboxypeptidase Y pro-peptide
 pf:CollagenCollagen triple helix repeat (20 copies)
 pf:CompetenceCompetence protein
 pf:CopineCopine
 pf:CxC6
 pf:Cys_Met_Meta_PPCys/Met metabolism PLP-dependent enzyme
 pf:D123D123
 pf:DEADDEAD/DEAH box helicase
 pf:DHC_N1Dynein heavy chain, N-terminal region 1
 pf:DHC_N2Dynein heavy chain, N-terminal region 2
 pf:DUF1664Protein of unknown function (DUF1664)
 pf:DUF2284Predicted metal-binding protein (DUF2284)
 pf:DUF2721Protein of unknown function (DUF2721)
 pf:DUF3150Protein of unknown function (DUF3150)
 pf:DUF3450Protein of unknown function (DUF3450)
 pf:DUF4032Domain of unknown function (DUF4032)
 pf:DUF4131Domain of unknown function (DUF4131)
 pf:DUF4157Domain of unknown function (DUF4157)
 pf:DUF5131Protein of unknown function (DUF5131)
 pf:DUF6058
 pf:DUF6184
 pf:DUF6229
 pf:DUF742Protein of unknown function (DUF742)
 pf:DUF815Protein of unknown function (DUF815)
 pf:DUF948Bacterial protein of unknown function (DUF948)
 pf:DegT_DnrJ_EryC1DegT/DnrJ/EryC1/StrS aminotransferase family
 pf:Dynein_AAA_lid
 pf:Dynein_C
 pf:Dynein_heavyDynein heavy chain and region D6 of dynein motor
 pf:EGFEGF-like domain
 pf:EGF_3EGF domain
 pf:EGF_CACalcium-binding EGF domain
 pf:EI24Etoposide-induced protein 2.4 (EI24)
 pf:EMIEMI domain
 pf:EXOC6_Sec15_N
 pf:Ephrin_rec_likePutative ephrin-receptor like
 pf:EpimeraseNAD dependent epimerase/dehydratase family
 pf:EryCIII-like_C
 pf:F-box-likeF-box-like
 pf:F420_oxidoredNADP oxidoreductase coenzyme F420-dependent
 pf:F5_F8_type_CF5/8 type C domain
 pf:FAD-oxidase_CFAD linked oxidases, C-terminal domain
 pf:FAD_binding_4FAD binding domain
 pf:FAD_binding_5FAD binding domain in molybdopterin dehydrogenase
 pf:FIVARUncharacterised Sugar-binding Domain
 pf:FXa_inhibitionCoagulation Factor Xa inhibitory site
 pf:F_actin_bindF-actin binding
 pf:FerritinFerritin-like domain
 pf:FlavoproteinFlavoprotein
 pf:FlxAFlxA-like protein
 pf:FolBDihydroneopterin aldolase
 pf:FrigidaFrigida-like protein
 pf:FtsK_SpoIIIEFtsK/SpoIIIE family
 pf:GAGA module
 pf:GATAGATA zinc finger
 pf:GCMGCM motif protein
 pf:GDP_Man_DehydGDP-mannose 4,6 dehydratase
 pf:GFO_IDH_MocAOxidoreductase family, NAD-binding Rossmann fold
 pf:GFO_IDH_MocA_COxidoreductase family, C-terminal alpha/beta domain
 pf:GLE1GLE1-like protein
 pf:GPS2_interactG-protein pathway suppressor 2-interacting domain
 pf:Glu_dehyd_CGlucose dehydrogenase C-terminus
 pf:Glyco_tran_28_CGlycosyltransferase family 28 C-terminal domain
 pf:Gp_dh_NGlyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
 pf:HAMPHAMP domain
 pf:HYRHYR domain
 pf:Haspin_kinase
 pf:HeHHeH/LEM domain
 pf:Helicase_CHelicase conserved C-terminal domain
 pf:Helo_like_NFungal N-terminal domain of STAND proteins
 pf:HepT-like
 pf:HepT-like_2
 pf:I-setImmunoglobulin I-set domain
 pf:IL32Interleukin 32
 pf:IPKInositol polyphosphate kinase
 pf:Ig_2Immunoglobulin domain
 pf:Ig_3Immunoglobulin domain
 pf:KAP_NTPaseKAP family P-loop domain
 pf:KRKR domain
 pf:Lar_restr_allevRestriction alleviation protein Lar
 pf:LebercilinCiliary protein causing Leber congenital amaurosis disease
 pf:MCPsignalMethyl-accepting chemotaxis protein (MCP) signalling domain
 pf:Methyltransf_25Methyltransferase domain
 pf:Mg_chelataseMagnesium chelatase, subunit ChlI
 pf:MgtC_SapB_C
 pf:Mito_fiss_regMitochondrial fission regulator
 pf:MnmE_helicalMnmE helical domain
 pf:MotA_N
 pf:Mrr_catRestriction endonuclease
 pf:NAD_binding_10NAD(P)H-binding
 pf:NAD_binding_2NAD binding domain of 6-phosphogluconate dehydrogenase
 pf:NAD_binding_3Homoserine dehydrogenase, NAD binding domain
 pf:NCD3GNine Cysteines Domain of family 3 GPCR
 pf:NRIP1_repr_3Nuclear receptor-interacting protein 1 repression 3
 pf:NmrANmrA-like family
 pf:OspDBorrelia outer surface protein D (OspD)
 pf:PHF20_AT-hook
 pf:PK_Tyr_Ser-Thr
 pf:PLU-1PLU-1-like protein
 pf:PP2C_2Protein phosphatase 2C
 pf:PkinaseProtein kinase domain
 pf:Plasmod_Pvs28Pvs28 EGF domain
 pf:PresenilinPresenilin
 pf:Pur_ac_phosph_NPurple acid Phosphatase, N-terminal domain
 pf:RNA_helicaseRNA helicase
 pf:RVPRetroviral aspartyl protease
 pf:Rad17Rad17 cell cycle checkpoint protein
 pf:RasGAP_CRasGAP C-terminus
 pf:RecG_dom3_C
 pf:ResIIIType III restriction enzyme, res subunit
 pf:Retrotrans_gagRetrotransposon gag protein
 pf:Rho_NRho termination factor, N-terminal domain
 pf:Ribosomal_S7eRibosomal protein S7e
 pf:Ricin_B_lectinRicin-type beta-trefoil lectin domain
 pf:RmlD_sub_bindRmlD substrate binding domain
 pf:RsgA_GTPase
 pf:SAPSAP domain
 pf:SH2SH2 domain
 pf:SH3_1SH3 domain
 pf:SH3_2Variant SH3 domain
 pf:SH3_3Bacterial SH3 domain
 pf:SH3_6SH3 domain (SH3b1 type)
 pf:SH3_9Variant SH3 domain
 pf:SMC_NRecF/RecN/SMC N terminal domain
 pf:SMC_hingeSMC proteins Flexible Hinge Domain
 pf:Sec10_N
 pf:Shikimate_DHShikimate / quinate 5-dehydrogenase
 pf:SorbSorbin homologous domain
 pf:SoxA-TsdA_cyt-c
 pf:SpoIIEStage II sporulation protein E (SpoIIE)
 pf:SpoIIE_N
 pf:SushiSushi repeat (SCR repeat)
 pf:Syntaxin-6_NSyntaxin 6, N-terminal
 pf:T6SS_TssFType VI secretion system, TssF
 pf:TCRTesmin/TSO1-like CXC domain, cysteine-rich domain
 pf:THF_DHG_CYH_CTetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
 pf:TPR_1Tetratricopeptide repeat
 pf:TPR_10Tetratricopeptide repeat
 pf:TPR_11TPR repeat
 pf:TPR_12Tetratricopeptide repeat
 pf:TPR_2Tetratricopeptide repeat
 pf:TPR_4Tetratricopeptide repeat
 pf:TPR_8Tetratricopeptide repeat
 pf:TPR_MalT
 pf:TRCFTRCF domain
 pf:TSP1_spondin
 pf:TSP_1Thrombospondin type 1 domain
 pf:TrkA_NTrkA-N domain
 pf:UDPGTUDP-glucoronosyl and UDP-glucosyl transferase
 pf:UDPG_MGDP_dh_NUDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
 pf:UTP20_C
 pf:UTP20_N
 pf:UvrB_inter
 pf:VWAvon Willebrand factor type A domain
 pf:VWA_2von Willebrand factor type A domain
 pf:WXG100Proteins of 100 residues with WXG
 pf:XdhC_CXdhC Rossmann domain
 pf:YbgSYbgS-like protein
 pf:YjbEExopolysaccharide production protein YjbE
 pf:YobI-ATPase
 pf:adh_shortshort chain dehydrogenase
 pf:adh_short_C2Enoyl-(Acyl carrier protein) reductase
 pf:cEGFComplement Clr-like EGF-like
 pf:cobWCobW/HypB/UreG, nucleotide-binding domain
 pf:eIF-3c_NEukaryotic translation initiation factor 3 subunit 8 N-terminus
 pf:fn3Fibronectin type III domain
 pf:gag-asp_proteasgag-polyprotein putative aspartyl protease
 pf:igImmunoglobulin domain


pavl:BKM03_30110 pf:CD225 pf:DegT_DnrJ_EryC1 pf:DUF6184

pamg:BKM19_000125 pf:CD225 pf:DUF6184

pfx:A7318_28205 pf:DUF3450 pf:DUF5131 pf:AP2 pf:DUF6184

rox:BV494_25385 pf:CD225 pf:PLU-1 pf:DUF6184

eay:EAM_P267 pf:DUF3450 pf:PLU-1













ecoi:ECOPMV1_p00086 pf:SoxA-TsdA_cyt-c

ysi:BF17_00295 pf:Frigida pf:YbgS

cie:AN232_30025 pf:OspD

eclx:LI66_23430 pf:OspD

mthi:C7M52_04208 pf:OspD

echg:FY206_25085 pf:OspD

yma:DA391_23545 pf:Lar_restr_allev

fsm:CCS41_13755 pf:COA2 pf:Calc_CGRP_IAPP pf:AP2 pf:GCM



parb:CJU94_40265 pf:YjbE

phs:C2L64_52785 pf:YjbE

xfh:XFHB_13025 pf:YjbE

cir:C2U53_00465 pf:Carbpep_Y_N pf:GLE1

ebc:C2U52_00695 pf:Carbpep_Y_N pf:GLE1

ecli:ECNIH5_23210 pf:Carbpep_Y_N

ecln:ECNIH4_23250 pf:Carbpep_Y_N

kqv:B8P98_30245 pf:Carbpep_Y_N



hau:Haur_0709 pf:DegT_DnrJ_EryC1 pf:Cys_Met_Meta_PP pf:Beta_elim_lyase pf:Aminotran_1_2

ahu:A6A40_04620 pf:DUF4131 pf:MotA_N pf:Competence

tot:TOT_010001215 pf:ARID pf:DUF2284

msd:MYSTI_06897 pf:DUF4157 pf:DUF4157 pf:Apolipoprotein pf:IL32 pf:WXG100 pf:MnmE_helical

ali:AZOLI_1090 pf:DUF4131 pf:MotA_N pf:Competence

rcu:8271783 pf:Alginate_exp

kfl:Kfla_3643 pf:2-Hacid_dh_C pf:THF_DHG_CYH_C pf:Shikimate_DH pf:adh_short pf:KR pf:Epimerase pf:GDP_Man_Dehyd pf:adh_short_C2 pf:ApbA

clus:A9F13_08g00110 pf:ADD_DNMT3 pf:GATA

msa:Mycsm_03008 pf:Ferritin

buk:MYA_3019 pf:adh_short pf:Epimerase pf:KR pf:adh_short_C2

bve:AK36_3362 pf:adh_short pf:Epimerase pf:KR pf:adh_short_C2

mvq:MYVA_2731 pf:Ferritin

pdam:113666415 pf:TSP_1 pf:TSP1_spondin pf:CxC6 pf:TSP1_spondin pf:TSP_1 pf:TSP1_spondin pf:TSP_1 pf:TSP_1 pf:TSP1_spondin pf:TSP1_spondin pf:TSP_1 pf:Ricin_B_lectin pf:Ricin_B_lectin pf:F5_F8_type_C pf:FXa_inhibition pf:EGF_3 pf:cEGF pf:EGF_CA pf:FXa_inhibition pf:EGF_3 pf:EGF pf:Plasmod_Pvs28 pf:cEGF pf:EGF_CA pf:FXa_inhibition pf:EGF_3 pf:EGF pf:cEGF pf:EGF_CA pf:FXa_inhibition pf:EGF_3 pf:cEGF pf:Sushi pf:Sushi pf:HYR pf:HYR pf:Ephrin_rec_like pf:NCD3G pf:Ephrin_rec_like pf:NCD3G pf:NCD3G pf:Ephrin_rec_like pf:Ig_3 pf:I-set pf:Ig_2 pf:ig

sbi:110434971 pf:Rho_N pf:HeH pf:SAP

bra:BRADO2737 pf:4HB_MCP_1 pf:HAMP pf:MCPsignal pf:DUF1664 pf:Syntaxin-6_N pf:ATG17_like pf:DUF948 pf:EXOC6_Sec15_N pf:DUF948 pf:MCPsignal pf:Sec10_N

dku:Desku_0211 pf:SpoIIE_N pf:MgtC_SapB_C pf:DUF4032 pf:PP2C_2 pf:SpoIIE

mia:OCU_13270 pf:Ferritin

tmn:UCRPA7_5728 pf:Helo_like_N pf:TPR_12 pf:TPR_2 pf:TPR_8 pf:TPR_1 pf:TPR_10 pf:TPR_MalT pf:TPR_11 pf:Ank_2 pf:Ank_4 pf:Ank_2 pf:Ank pf:Ank_3 pf:Ank_2 pf:Ank_5 pf:Ank_2 pf:Ank pf:Ank_4 pf:Ank_5 pf:Ank pf:Ank_3 pf:Ank_5

cmp:Cha6605_3623 pf:Aldo_ket_red pf:AphA_like pf:ADH_zinc_N_2

fme:FOMMEDRAFT_146742 pf:Amidohydro_3 pf:Amidohydro_1

bvg:104902239 pf:TCR pf:TCR

mbas:ALGA_1873 pf:T6SS_TssF

mva:Mvan_2838 pf:Ferritin

opo:DSM2777_22255 pf:FolB pf:Bro-N

tgu:100231821 pf:Sorb pf:SH3_2 pf:SH3_1 pf:SH3_9 pf:SH3_1 pf:SH3_9 pf:SH3_2 pf:SH3_2 pf:SH3_1 pf:SH3_9

adl:AURDEDRAFT_153031 pf:RasGAP_C pf:F-box-like

bro:BRAD285_4595 pf:4HB_MCP_1 pf:HAMP pf:ATG17_like pf:Syntaxin-6_N pf:DUF948 pf:DUF948 pf:EXOC6_Sec15_N pf:MCPsignal

hav:AT03_03935 pf:FolB pf:Bro-N

hcq:109532260 pf:SH3_2 pf:SH3_1 pf:SH3_9 pf:SH3_3 pf:SH3_6 pf:SH2 pf:PK_Tyr_Ser-Thr pf:Pkinase pf:ABC1 pf:Haspin_kinase pf:F_actin_bind

pbp:STSP1_00682 pf:NRIP1_repr_3 pf:HepT-like pf:HepT-like_2

boo:E2K80_14205 pf:2-Hacid_dh pf:2-Hacid_dh_C pf:F420_oxidored pf:GFO_IDH_MocA pf:Gp_dh_N pf:NAD_binding_2 pf:AlaDh_PNT_C pf:3HCDH_N pf:XdhC_C

gja:107118441 pf:Mito_fiss_reg pf:GPS2_interact pf:FlxA

ops:A8A54_21305 pf:Mrr_cat

taw:EI545_14310 pf:Glyco_tran_28_C pf:EryCIII-like_C pf:UDPGT

def:CNY67_12450 pf:DUF3150

els:105015765 pf:fn3 pf:VWA pf:VWA_2 pf:fn3 pf:VWA pf:VWA_2 pf:fn3 pf:Pur_ac_phosph_N pf:fn3 pf:Pur_ac_phosph_N pf:fn3 pf:Pur_ac_phosph_N pf:fn3 pf:Pur_ac_phosph_N pf:fn3 pf:fn3 pf:VWA pf:VWA_2 pf:fn3 pf:fn3 pf:Pur_ac_phosph_N pf:fn3 pf:fn3 pf:fn3 pf:Pur_ac_phosph_N pf:fn3 pf:fn3 pf:Pur_ac_phosph_N pf:fn3 pf:Pur_ac_phosph_N pf:fn3 pf:Pur_ac_phosph_N pf:fn3 pf:VWA pf:VWA_2 pf:Copine pf:Collagen pf:Collagen pf:Collagen pf:Collagen pf:Collagen


mjl:Mjls_3044 pf:Ferritin

now:GBF35_47215 pf:Flavoprotein

ats:109755327 pf:RmlD_sub_bind pf:F420_oxidored pf:adh_short pf:Epimerase pf:NmrA pf:3Beta_HSD pf:GDP_Man_Dehyd pf:NAD_binding_10

cpv:cgd4_2200 pf:AAA_15 pf:SMC_N pf:AAA_23 pf:AAA_29 pf:AAA_21 pf:ABC_tran pf:FlxA pf:SMC_hinge pf:Lebercilin pf:SMC_N pf:AAA_21 pf:ABC_tran

epa:110251851 pf:DHC_N1 pf:DHC_N1 pf:DHC_N2 pf:AAA_6 pf:AAA pf:AAA_6 pf:FtsK_SpoIIIE pf:AAA_16 pf:AAA pf:AAA_22 pf:RNA_helicase pf:Dynein_AAA_lid pf:DUF815 pf:AAA_7 pf:Rad17 pf:Mg_chelatase pf:AAA_16 pf:YobI-ATPase pf:ABC_tran pf:KAP_NTPase pf:RsgA_GTPase pf:AAA_29 pf:AAA_22 pf:AAA_14 pf:AAA pf:RNA_helicase pf:ATPase_2 pf:cobW pf:AAA_lid_1 pf:AAA_8 pf:D123 pf:AAA_9 pf:Dynein_heavy pf:AAA_lid_11 pf:Dynein_C

lbz:LBRM_34_0660 pf:UTP20_N pf:UTP20_N pf:UTP20_C pf:UTP20_C

mcb:Mycch_2558 pf:Ferritin

miz:BAB75_26700 pf:Ferritin pf:DUF6058

mpul:BLA55_03600 pf:GA pf:GA pf:FIVAR pf:GA pf:FIVAR pf:GA pf:FIVAR pf:Acyl-CoA_ox_N pf:FIVAR pf:GA

psoj:PHYSODRAFT_253063 pf:Retrotrans_gag pf:eIF-3c_N pf:Asp_protease_2 pf:gag-asp_proteas pf:Asp_protease pf:RVP

rav:AAT18_25960 pf:CD225 pf:TPR_4

stri:C7M71_000675 pf:Ferritin

amyb:BKN51_02580 pf:CD225 pf:EI24 pf:Presenilin

aoi:AORI_2083 pf:CD225 pf:EI24 pf:Presenilin

bde:BDP_0869 pf:UvrB_inter pf:CarD_TRCF_RID pf:DEAD pf:ResIII pf:AAA_22 pf:Helicase_C pf:RecG_dom3_C pf:TRCF

bdn:BBDE_0829 pf:UvrB_inter pf:CarD_TRCF_RID pf:DEAD pf:ResIII pf:AAA_22 pf:Helicase_C pf:RecG_dom3_C pf:TRCF

cam:101499400 pf:TCR pf:TCR

cjo:107313241 pf:EMI pf:EGF pf:C1q

clu:CLUG_00208 pf:PHF20_AT-hook pf:ADD_DNMT3 pf:GATA

git:C6V83_15535 pf:FAD_binding_4 pf:FAD_binding_5 pf:DUF6229 pf:FAD-oxidase_C

hse:Hsero_2254 pf:Aldedh pf:DUF742

hsz:ACP92_11250 pf:Aldedh pf:DUF742

jaz:YQ44_03340 pf:ADH_N pf:2-Hacid_dh_C pf:AdoHcyase_NAD pf:Glu_dehyd_C pf:AlaDh_PNT_C pf:TrkA_N pf:UDPG_MGDP_dh_N pf:ApbA pf:ADH_zinc_N pf:Methyltransf_25 pf:GFO_IDH_MocA pf:NAD_binding_3 pf:GFO_IDH_MocA_C

mhas:MHAS_02022 pf:Ferritin pf:DUF2721


shs:STEHIDRAFT_146268 pf:Ribosomal_S7e pf:IPK