Search common motifs in selected sequences


  
Motifs : pf:AAAATPase family associated with various cellular activities (AAA)
 pf:AAA_14AAA domain
 pf:AAA_15AAA ATPase domain
 pf:AAA_16AAA ATPase domain
 pf:AAA_21AAA domain, putative AbiEii toxin, Type IV TA system
 pf:AAA_22AAA domain
 pf:AAA_23AAA domain
 pf:AAA_25AAA domain
 pf:AAA_29P-loop containing region of AAA domain
 pf:AAA_30AAA domain
 pf:AAA_5AAA domain (dynein-related subfamily)
 pf:ABC_membraneABC transporter transmembrane region
 pf:ABC_tranABC transporter
 pf:ANAPC4_WD40Anaphase-promoting complex subunit 4 WD40 domain
 pf:ATR13Avirulence protein ATR13, RxLR effector
 pf:Alpha-2-MRAP_NAlpha-2-macroglobulin RAP, N-terminal domain
 pf:ApbAKetopantoate reductase PanE/ApbA
 pf:CRLF2_D1
 pf:CarbopepD_reg_2CarboxypepD_reg-like domain
 pf:CarboxypepD_regCarboxypeptidase regulatory-like domain
 pf:CoA_bindingCoA binding domain
 pf:CooC_CCS1-pili formation C-terminal
 pf:DDRDiol dehydratase reactivase ATPase-like domain
 pf:DLICDynein light intermediate chain (DLIC)
 pf:DUF1428Protein of unknown function (DUF1428)
 pf:DUF2157Predicted membrane protein (DUF2157)
 pf:DUF2723Protein of unknown function (DUF2723)
 pf:DUF4131Domain of unknown function (DUF4131)
 pf:EGF_2EGF-like domain
 pf:EpoR_lig-bindErythropoietin receptor, ligand binding
 pf:F420_oxidoredNADP oxidoreductase coenzyme F420-dependent
 pf:FAM171A1-2-B_N
 pf:FHAFHA domain
 pf:Frataxin_CyayFrataxin-like domain
 pf:GPD_NAD_C_bact
 pf:Glyco_hyd_65N_2Glycosyl hydrolase family 65, N-terminal domain
 pf:Glyco_hydro_4Family 4 glycosyl hydrolase
 pf:Glyco_hydro_95_C
 pf:HSP70Hsp70 protein
 pf:HTH_9RNA polymerase III subunit RPC82 helix-turn-helix domain
 pf:Haspin_kinase
 pf:Hydantoinase_AHydantoinase/oxoprolinase
 pf:I-setImmunoglobulin I-set domain
 pf:IL6Ra-bindInterleukin-6 receptor alpha chain, binding
 pf:Ig_2Immunoglobulin domain
 pf:Ig_3Immunoglobulin domain
 pf:Imm27Immunity protein 27
 pf:Integrase_H2C2
 pf:KI67R
 pf:KRE1Killer toxin-resistance protein 1
 pf:Lactamase_BMetallo-beta-lactamase superfamily
 pf:Lactamase_B_2Beta-lactamase superfamily domain
 pf:Lactamase_B_3Beta-lactamase superfamily domain
 pf:MOV-10_Ig-like
 pf:MRP_L5339S ribosomal protein L53/MRP-L53
 pf:Methylase_SType I restriction modification DNA specificity domain
 pf:MreB_MblMreB/Mbl protein
 pf:NACHTNACHT domain
 pf:NAD_Gly3P_dh_CNAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
 pf:NAD_Gly3P_dh_NNAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
 pf:NAD_binding_2NAD binding domain of 6-phosphogluconate dehydrogenase
 pf:NAD_binding_7Putative NAD(P)-binding
 pf:NBCH_WD40
 pf:ODP
 pf:PALPPyridoxal-phosphate dependent enzyme
 pf:PASPAS fold
 pf:PAS_4PAS fold
 pf:PAS_8PAS domain
 pf:PAS_9PAS domain
 pf:PK_Tyr_Ser-Thr
 pf:PP1_bindProtein phosphatase 1 binding
 pf:PPR_2PPR repeat family
 pf:Pesticin_RB
 pf:PilM_2Type IV pilus assembly protein PilM;
 pf:PkinaseProtein kinase domain
 pf:PlugTonB-dependent Receptor Plug Domain
 pf:Pur_ac_phosph_NPurple acid Phosphatase, N-terminal domain
 pf:RE_ApaLIApaLI-like restriction endonuclease
 pf:RT_RNaseH
 pf:RT_RNaseH_2
 pf:RapH_N
 pf:SFTA2Surfactant-associated protein 2
 pf:SMC_NRecF/RecN/SMC N terminal domain
 pf:SPORSporulation related domain
 pf:SRP54SRP54-type protein, GTPase domain
 pf:Sacchrp_dh_NADPSaccharopine dehydrogenase NADP binding domain
 pf:Sds3Sds3-like
 pf:Semialdhyde_dhSemialdehyde dehydrogenase, NAD binding domain
 pf:Shikimate_DHShikimate / quinate 5-dehydrogenase
 pf:Thr_dehydrat_CC-terminal regulatory domain of Threonine dehydratase
 pf:Tli4_N
 pf:TonB_dep_RecTonB dependent receptor
 pf:Transposase_mutTransposase, Mutator family
 pf:TsaEThreonylcarbamoyl adenosine biosynthesis protein TsaE
 pf:UPF0182Uncharacterised protein family (UPF0182)
 pf:WD40WD domain, G-beta repeat
 pf:WD40_likeWD40-like domain
 pf:Yop-YscD_cplInner membrane component of T3SS, cytoplasmic domain
 pf:Zeta_toxinZeta toxin
 pf:eIF2AEukaryotic translation initiation factor eIF2A
 pf:fn3Fibronectin type III domain
 pf:fvmX5
 pf:hEGFHuman growth factor-like EGF
 pf:igImmunoglobulin domain
 pf:rveIntegrase core domain
 pf:rve_3Integrase core domain
 pf:zf-H2C2His(2)-Cys(2) zinc finger

snu:SPNA45_00777 pf:RE_ApaLI

bcl:ABC0821 pf:RE_ApaLI

smf:Smon_1072 pf:RapH_N pf:RE_ApaLI

acii:C4901_16890 pf:RE_ApaLI

mml:MLC_1620 pf:RE_ApaLI

gen:GM3709_2271 pf:RE_ApaLI pf:SFTA2

cau:Caur_0321 pf:RE_ApaLI pf:Tli4_N pf:SPOR

chl:Chy400_0345 pf:RE_ApaLI pf:Tli4_N pf:SPOR

fbr:FBFL15_1932 pf:RE_ApaLI

kos:KORDIASMS9_03404 pf:RE_ApaLI

mmy:MSC_0185 pf:RE_ApaLI

mmyi:mycmycITA_00205 pf:RE_ApaLI

mmym:MMS_A0212 pf:RE_ApaLI

lho:LOOC260_200120 pf:RE_ApaLI

snc:HMPREF0837_11114 pf:RE_ApaLI

snd:MYY_0860 pf:RE_ApaLI

snm:SP70585_1471 pf:RE_ApaLI

snp:SPAP_1461 pf:RE_ApaLI

spnn:T308_03875 pf:RE_ApaLI

spw:SPCG_1417 pf:RE_ApaLI

spx:SPG_1371 pf:RE_ApaLI

snb:SP670_0869 pf:RE_ApaLI

spng:HMPREF1038_01416 pf:RE_ApaLI

gee:GM3708_1441 pf:RE_ApaLI pf:SFTA2

hfe:HFELIS_05940 pf:RE_ApaLI

can:Cyan10605_1164 pf:RE_ApaLI

tpk:JO40_12110 pf:RE_ApaLI pf:Imm27

cld:CLSPO_c15500 pf:PAS pf:PAS_4 pf:PAS_9 pf:PAS_8 pf:PAS_9 pf:PAS_4 pf:PAS pf:PAS pf:PAS_8 pf:PAS_9

hho:HydHO_0468 pf:Lactamase_B pf:Lactamase_B_3 pf:ODP pf:Lactamase_B_2

hys:HydSN_0477 pf:Lactamase_B pf:Lactamase_B_3 pf:ODP pf:Lactamase_B_2




ptm:GSPATT00020512001 pf:eIF2A pf:ANAPC4_WD40 pf:WD40_like pf:WD40 pf:ANAPC4_WD40 pf:WD40 pf:ANAPC4_WD40 pf:ANAPC4_WD40 pf:WD40 pf:eIF2A pf:NBCH_WD40 pf:WD40

marb:CJ263_05540 pf:Methylase_S pf:Methylase_S

als:DJ013_14770 pf:NAD_Gly3P_dh_N pf:F420_oxidored pf:Shikimate_DH pf:Semialdhyde_dh pf:Glyco_hydro_4 pf:NAD_binding_2 pf:NAD_binding_7 pf:ApbA pf:Sacchrp_dh_NADP pf:RE_ApaLI pf:CoA_binding pf:NAD_Gly3P_dh_C pf:GPD_NAD_C_bact

ano:RR32_16800 pf:DUF1428 pf:MRP_L53

brl:BZG35_11045 pf:Lactamase_B pf:Lactamase_B_2

eiv:EIN_016120 pf:HSP70 pf:MreB_Mbl pf:Hydantoinase_A pf:DDR pf:HTH_9 pf:PilM_2

fae:FAES_2053 pf:ABC_membrane pf:AAA_25 pf:ABC_tran pf:AAA_29 pf:AAA_15 pf:TsaE pf:DLIC pf:AAA_22 pf:AAA_5 pf:AAA_14 pf:SRP54 pf:AAA_16 pf:NACHT pf:AAA_21 pf:AAA_23 pf:AAA_30 pf:AAA pf:Zeta_toxin pf:SMC_N pf:AAA_21

hya:HY04AAS1_0479 pf:Lactamase_B pf:Lactamase_B_3 pf:ODP pf:Lactamase_B_2

npa:UCRNP2_4529 pf:FAM171A1-2-B_N


xtr:779458 pf:Yop-YscD_cpl pf:FHA pf:PP1_bind pf:KI67R pf:KI67R pf:KI67R

afu:AF_2407 pf:Lactamase_B pf:ODP pf:Lactamase_B

cak:Caul_1588 pf:Lactamase_B pf:Lactamase_B_2

sfk:KY5_5326 pf:UPF0182 pf:DUF2157 pf:DUF4131

shg:Sph21_1004 pf:CooC_C pf:CarboxypepD_reg pf:CarbopepD_reg_2 pf:Plug pf:TonB_dep_Rec pf:KRE1

adf:107330336 pf:RT_RNaseH pf:RT_RNaseH_2 pf:Integrase_H2C2 pf:zf-H2C2 pf:rve pf:rve_3

psty:BFS30_12510 pf:DUF2723 pf:DUF4131 pf:PPR_2


abaa:IX88_03490 pf:Pesticin_RB pf:Alpha-2-MRAP_N pf:MRP_L53

abad:ABD1_02360 pf:Pesticin_RB pf:Alpha-2-MRAP_N pf:MRP_L53

abau:IX87_15815 pf:Pesticin_RB pf:MRP_L53

abk:LX00_01355 pf:Pesticin_RB pf:MRP_L53

rho:RHOM_04430 pf:fvmX5 pf:ATR13

sap:Sulac_0777 pf:Transposase_mut

sasa:106560517 pf:I-set pf:ig pf:Ig_3 pf:EGF_2 pf:hEGF pf:EGF_2 pf:EGF_2 pf:I-set pf:ig pf:Ig_3 pf:Ig_2 pf:fn3 pf:fn3 pf:fn3 pf:Pur_ac_phosph_N pf:PK_Tyr_Ser-Thr pf:Pkinase pf:Haspin_kinase

say:TPY_3156 pf:Transposase_mut

acb:A1S_0252 pf:Pesticin_RB pf:MRP_L53

bstg:WT74_01915 pf:Frataxin_Cyay

clv:102086225 pf:EpoR_lig-bind pf:fn3 pf:IL6Ra-bind pf:CRLF2_D1 pf:fn3 pf:Pur_ac_phosph_N pf:EpoR_lig-bind pf:fn3 pf:IL6Ra-bind pf:CRLF2_D1 pf:fn3 pf:Pur_ac_phosph_N pf:MOV-10_Ig-like

fch:102047942 pf:EpoR_lig-bind pf:fn3 pf:IL6Ra-bind pf:CRLF2_D1 pf:fn3 pf:Pur_ac_phosph_N pf:EpoR_lig-bind pf:fn3 pf:IL6Ra-bind pf:CRLF2_D1 pf:fn3 pf:Pur_ac_phosph_N pf:MOV-10_Ig-like

fpg:101923331 pf:EpoR_lig-bind pf:fn3 pf:IL6Ra-bind pf:CRLF2_D1 pf:fn3 pf:Pur_ac_phosph_N pf:EpoR_lig-bind pf:fn3 pf:IL6Ra-bind pf:CRLF2_D1 pf:fn3 pf:Pur_ac_phosph_N pf:MOV-10_Ig-like

maj:MAA_05189 pf:PALP pf:Thr_dehydrat_C pf:Thr_dehydrat_C

nko:Niako_2411 pf:Glyco_hyd_65N_2 pf:Sds3 pf:Glyco_hydro_95_C