Search common motifs in selected sequences


  
Motifs : pf:7TM_GPCR_SrvSerpentine type 7TM GPCR chemoreceptor Srv
 pf:7TM_GPCR_SrxSerpentine type 7TM GPCR chemoreceptor Srx
 pf:7tm_17 transmembrane receptor (rhodopsin family)
 pf:AAA_22AAA domain
 pf:AAA_34P-loop containing NTP hydrolase pore-1
 pf:ABC1ABC1 family
 pf:ACR_tranAcrB/AcrD/AcrF family
 pf:AIP3Actin interacting protein 3
 pf:AMP-binding_C_2AMP-binding enzyme C-terminal domain
 pf:AP2AP2 domain
 pf:APHPhosphotransferase enzyme family
 pf:Amino_oxidaseFlavin containing amine oxidoreductase
 pf:Aminotran_3Aminotransferase class-III
 pf:Aminotran_5Aminotransferase class-V
 pf:AnkAnkyrin repeat
 pf:Ank_2Ankyrin repeats (3 copies)
 pf:Ank_3Ankyrin repeat
 pf:Ank_4Ankyrin repeats (many copies)
 pf:Ank_5Ankyrin repeats (many copies)
 pf:BUD22BUD22
 pf:BiPBP_CPenicillin-Binding Protein C-terminus Family
 pf:C8C8 domain
 pf:CBM_5_12Carbohydrate binding domain
 pf:CDC45CDC45-like protein
 pf:CHB_HEX_C_1Chitobiase/beta-hexosaminidase C-terminal domain
 pf:CRAL_TRIO_2Divergent CRAL/TRIO domain
 pf:CalsarcinCalcineurin-binding protein (Calsarcin)
 pf:ChromoChromo (CHRromatin Organisation MOdifier) domain
 pf:CwfJ_C_1Protein similar to CwfJ C-terminus 1
 pf:CwfJ_C_2Protein similar to CwfJ C-terminus 2
 pf:DAC
 pf:DAOFAD dependent oxidoreductase
 pf:DEADDEAD/DEAH box helicase
 pf:DNA_ligase_A_CATP dependent DNA ligase C terminal region
 pf:DNA_ligase_A_MATP dependent DNA ligase domain
 pf:DNA_ligase_IVDNA ligase IV
 pf:DNA_ligase_OB_2DNA ligase OB-like domain
 pf:DUF11Domain of unknown function DUF11
 pf:DUF1677Protein of unknown function (DUF1677)
 pf:DUF1866Domain of unknown function (DUF1866)
 pf:DUF2321Uncharacterized protein conserved in bacteria (DUF2321)
 pf:DUF2330Uncharacterized protein conserved in bacteria (DUF2330)
 pf:DUF4007Protein of unknown function (DUF4007)
 pf:DUF4190Domain of unknown function (DUF4190)
 pf:DUF4537Domain of unknown function (DUF4537)
 pf:DUF5580_M
 pf:DUF5894
 pf:DZRDouble zinc ribbon
 pf:DisA-linkerDisA bacterial checkpoint controller linker region
 pf:DivICSeptum formation initiator
 pf:DprA_WH
 pf:DynamitinDynamitin
 pf:EF-hand_1EF hand
 pf:EF-hand_5EF hand
 pf:EF-hand_6EF-hand domain
 pf:EF-hand_7EF-hand domain pair
 pf:EF-hand_8EF-hand domain pair
 pf:EpimeraseNAD dependent epimerase/dehydratase family
 pf:F-box-likeF-box-like
 pf:FAD_binding_2FAD binding domain
 pf:FAD_binding_3FAD binding domain
 pf:FMN_dhFMN-dependent dehydrogenase
 pf:Fn3_assocFn3 associated
 pf:FoP_duplicationC-terminal duplication domain of Friend of PRMT1
 pf:GCD14_NtRNA methyltransferase complex GCD14 subunit N-term
 pf:GREB1_2nd
 pf:GREB1_C
 pf:GREB1_N
 pf:HATPase_cHistidine kinase-, DNA gyrase B-, and HSP90-like ATPase
 pf:HATPase_c_2Histidine kinase-like ATPase domain
 pf:HDA2-3Class II histone deacetylase complex subunits 2 and 3
 pf:HHHHelix-hairpin-helix motif
 pf:HHH_2Helix-hairpin-helix motif
 pf:HI0933_likeHI0933-like protein
 pf:HTH_28Helix-turn-helix domain
 pf:HTH_DeoRDeoR-like helix-turn-helix domain
 pf:HTH_PafC
 pf:HTH_WhiAWhiA C-terminal HTH domain
 pf:Helicase_CHelicase conserved C-terminal domain
 pf:Helicase_C_4C-terminal domain on Strawberry notch homologue
 pf:HhH-GPDHhH-GPD superfamily base excision DNA repair protein
 pf:HisKA_3Histidine kinase
 pf:IQ_SEC7_PHPH domain
 pf:Ion_transIon transport protein
 pf:JmjCJmjC domain, hydroxylase
 pf:KRKR domain
 pf:KdpDOsmosensitive K+ channel His kinase sensor domain
 pf:Kinase-likeKinase-like
 pf:LBR_tudorLamin-B receptor of TUDOR domain
 pf:LEMLEM domain
 pf:LOC400499
 pf:LON_substr_bdgATP-dependent protease La (LON) substrate-binding domain
 pf:Lactamase_BMetallo-beta-lactamase superfamily
 pf:Lactamase_B_2Beta-lactamase superfamily domain
 pf:Laminin_IILaminin Domain II
 pf:Lsr2Lsr2
 pf:Lycopene_cyclLycopene cyclase protein
 pf:MTSMethyltransferase small domain
 pf:MTTBTrimethylamine methyltransferase (MTTB)
 pf:Myb_DNA-bindingMyb-like DNA-binding domain
 pf:NAD_binding_7Putative NAD(P)-binding
 pf:NAD_binding_8NAD(P)-binding Rossmann-like domain
 pf:NTF2Nuclear transport factor 2 (NTF2) domain
 pf:NitroreductaseNitroreductase family
 pf:Nup35_RRMNup53/35/40-type RNA recognition motif
 pf:ODP
 pf:PHPH domain
 pf:PHDPHD-finger
 pf:PHD_2PHD-finger
 pf:PH_10Pleckstrin homology domain
 pf:PH_19
 pf:PK_Tyr_Ser-Thr
 pf:PLDc_2PLD-like domain
 pf:PPP4R2PPP4R2
 pf:ParANUBPL iron-transfer P-loop NTPase
 pf:PkinaseProtein kinase domain
 pf:Pkinase_fungal
 pf:PqqDCoenzyme PQQ synthesis protein D (PqqD)
 pf:Prok-RING_4Prokaryotic RING finger family 4
 pf:Pyr_redoxPyridine nucleotide-disulphide oxidoreductase
 pf:Pyr_redox_2Pyridine nucleotide-disulphide oxidoreductase
 pf:Pyr_redox_3Pyridine nucleotide-disulphide oxidoreductase
 pf:RNA_ligaseRNA ligase
 pf:RNase_E_GRibonuclease E/G family
 pf:RPAP1_CRPAP1-like, C-terminal
 pf:RRM_1RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
 pf:RRM_3RNA binding motif
 pf:RRM_5RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
 pf:RRM_7RNA recognition motif
 pf:RabGAP-TBCRab-GTPase-TBC domain
 pf:Rad50_zn_hookRad50 zinc hook motif
 pf:Rad9_Rad53_bindFungal Rad9-like Rad53-binding
 pf:ResIIIType III restriction enzyme, res subunit
 pf:RhoGEFRhoGEF domain
 pf:RhodaneseRhodanese-like domain
 pf:Rng_hyd_C
 pf:SDP_NSex determination protein N terminal
 pf:SNF2-rel_dom
 pf:SPARC_Ca_bdgSecreted protein acidic and rich in cysteine Ca binding region
 pf:Sacchrp_dh_NADPSaccharopine dehydrogenase NADP binding domain
 pf:SecD_SecFProtein export membrane protein
 pf:SensorPutative sensor
 pf:Shikimate_DHShikimate / quinate 5-dehydrogenase
 pf:Spc24Spc24 subunit of Ndc80
 pf:SulfataseSulfatase
 pf:TAGT
 pf:TFIIATranscription factor IIA, alpha/beta subunit
 pf:THF_DHG_CYH_CTetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
 pf:TOPRIM_CC-terminal associated domain of TOPRIM
 pf:TPR_MLP1_2TPR/MLP1/MLP2-like protein
 pf:TSC22TSC-22/dip/bun family
 pf:Tfb4Transcription factor Tfb4
 pf:ThiFThiF family
 pf:TonB_CGram-negative bacterial TonB protein C-terminal
 pf:TransglyTransglycosylase
 pf:TranspeptidasePenicillin binding protein transpeptidase domain
 pf:TrkA_NTrkA-N domain
 pf:Tudor_2
 pf:Tudor_5
 pf:UDPG_MGDP_dhUDP-glucose/GDP-mannose dehydrogenase family, central domain
 pf:UDPG_MGDP_dh_CUDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
 pf:UDPG_MGDP_dh_NUDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
 pf:UPF0758_N
 pf:VWDvon Willebrand factor type D domain
 pf:Vit_open_b-sht
 pf:Vitellogenin_NLipoprotein amino terminal region
 pf:WD40_2
 pf:WWWW domain
 pf:WYLWYL domain
 pf:YabA
 pf:YscJ_FliFSecretory protein of YscJ/FliF family
 pf:YscJ_FliF_CFlagellar M-ring protein C-terminal
 pf:YvrJYvrJ protein family
 pf:ZapBCell division protein ZapB
 pf:adh_shortshort chain dehydrogenase
 pf:adh_short_C2Enoyl-(Acyl carrier protein) reductase
 pf:cNMP_bindingCyclic nucleotide-binding domain
 pf:cpSF2-GREB1
 pf:zf-ANAPC11Anaphase-promoting complex subunit 11 RING-H2 finger
 pf:zf-C2H2Zinc finger, C2H2 type
 pf:zf-C2H2_4C2H2-type zinc finger
 pf:zf-C2H2_6C2H2-type zinc finger
 pf:zf-C2H2_jazZinc-finger double-stranded RNA-binding
 pf:zf-C3HC4Zinc finger, C3HC4 type (RING finger)
 pf:zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)
 pf:zf-C3HC4_3Zinc finger, C3HC4 type (RING finger)
 pf:zf-C3HC4_4zinc finger of C3HC4-type, RING
 pf:zf-CCCH_6
 pf:zf-H2C2_2Zinc-finger double domain
 pf:zf-HC5HC2HPHD-like zinc-binding domain
 pf:zf-HC5HC2H_2PHD-zinc-finger like domain
 pf:zf-PHD-likePHD/FYVE-zinc-finger like domain
 pf:zf-RING_10zinc RING finger of MSL2
 pf:zf-RING_2Ring finger domain
 pf:zf-RING_5zinc-RING finger domain
 pf:zf-RING_UBOXRING-type zinc-finger
 pf:zf-metZinc-finger of C2H2 type
 pf:zf-rbx1RING-H2 zinc finger domain
 pf:zinc_ribbon_15zinc-ribbon family
 pf:zinc_ribbon_2zinc-ribbon domain

tbr:Tb11.02.4580 pf:DNA_ligase_A_M pf:DNA_ligase_A_M pf:DNA_ligase_OB_2

tcr:506773.140 pf:DNA_ligase_A_M pf:DNA_ligase_A_M pf:DNA_ligase_OB_2

lbz:LBRM_11_0130 pf:DNA_ligase_OB_2

lma:LMJF_11_0450 pf:DNA_ligase_OB_2

lif:LINJ_11_0450 pf:DNA_ligase_OB_2

ldo:LDBPK_110450 pf:DNA_ligase_OB_2

lmi:LMXM_11_0450 pf:DNA_ligase_OB_2

app:CAP2UW1_4591 pf:PLDc_2 pf:ResIII pf:DEAD pf:SNF2-rel_dom pf:Helicase_C

vg:22276754 pf:TOPRIM_C pf:DNA_ligase_A_M pf:DNA_ligase_OB_2

egz:104125526 pf:JmjC pf:PHD_2 pf:PHD pf:zf-HC5HC2H_2 pf:zf-HC5HC2H pf:Tudor_2 pf:DUF4537 pf:Tudor_5 pf:LBR_tudor pf:Tudor_2 pf:Rad9_Rad53_bind pf:AMP-binding_C_2

cman:A9D14_18190 pf:DNA_ligase_A_M pf:DNA_ligase_OB_2

dsq:DICSQDRAFT_180881 pf:zf-C3HC4_4 pf:zf-C3HC4_3 pf:zf-RING_10 pf:zf-RING_2 pf:zf-C3HC4_2 pf:zf-C3HC4 pf:zf-RING_UBOX pf:zf-C3HC4_4 pf:zf-RING_5 pf:Prok-RING_4 pf:zf-rbx1 pf:zf-ANAPC11 pf:LON_substr_bdg pf:LON_substr_bdg

tms:TREMEDRAFT_58496 pf:DNA_ligase_A_M pf:FMN_dh pf:DNA_ligase_OB_2

cput:CONPUDRAFT_120792 pf:Dynamitin pf:SDP_N pf:Dynamitin pf:AIP3 pf:TPR_MLP1_2

lve:103090554 pf:7TM_GPCR_Srx pf:7tm_1 pf:7TM_GPCR_Srv

phd:102333037 pf:7TM_GPCR_Srx pf:7tm_1 pf:7TM_GPCR_Srv

biu:109558921 pf:7TM_GPCR_Srx pf:7tm_1 pf:7TM_GPCR_Srv

bom:102287287 pf:7TM_GPCR_Srx pf:7tm_1

chx:102188385 pf:7TM_GPCR_Srx pf:7tm_1 pf:7TM_GPCR_Srv

oas:101109088 pf:7TM_GPCR_Srx pf:7tm_1 pf:7TM_GPCR_Srv

acep:105626914 pf:NTF2 pf:WD40_2 pf:RRM_7 pf:RRM_1

actc:CHIBA101_1254 pf:HTH_PafC pf:HTH_DeoR pf:HTH_28 pf:PqqD pf:WYL

cbot:ATE48_02770 pf:TonB_C

ccaj:109802809 pf:Nitroreductase pf:YvrJ pf:Nitroreductase

vcn:VOLCADRAFT_92428 pf:Ion_trans pf:cNMP_binding

kau:B6264_30645 pf:DNA_ligase_A_M pf:DNA_ligase_A_C

cmk:103182092 pf:Ank_2 pf:Ank_4 pf:Ank_5 pf:Ank pf:Ank_4 pf:Ank_3 pf:LEM

hir:HETIRDRAFT_68211 pf:Aminotran_5

mhd:Marky_1048 pf:ACR_tran pf:Helicase_C pf:SecD_SecF pf:ACR_tran pf:SecD_SecF

adl:AURDEDRAFT_150126 pf:F-box-like

ago:AGOS_ADL323C pf:Tfb4 pf:Rad50_zn_hook

npp:PP1Y_AT14538 pf:MTS pf:AAA_34 pf:ResIII pf:Helicase_C_4

pbar:105424762 pf:NTF2 pf:RRM_7 pf:RRM_1

tha:TAM4_2108 pf:Lactamase_B pf:ODP pf:Lactamase_B_2

hst:105183244 pf:NTF2 pf:RRM_7 pf:RRM_1

svt:SVTN_13955 pf:Sensor pf:HisKA_3 pf:HATPase_c_2 pf:HATPase_c

aju:106965442 pf:7TM_GPCR_Srx pf:7tm_1 pf:7TM_GPCR_Srv

bta:540410 pf:7TM_GPCR_Srx pf:7tm_1 pf:7TM_GPCR_Srv

fca:101084547 pf:7TM_GPCR_Srx pf:7tm_1 pf:7TM_GPCR_Srv

noa:BKM31_21820 pf:Pyr_redox_2 pf:Pyr_redox pf:HI0933_like pf:Lycopene_cycl pf:TrkA_N pf:FAD_binding_3 pf:DAO pf:FAD_binding_2 pf:NAD_binding_8 pf:Pyr_redox_3 pf:Amino_oxidase pf:Pyr_redox_2 pf:Pyr_redox pf:DAO pf:Rng_hyd_C

oor:101285374 pf:7TM_GPCR_Srx pf:7tm_1 pf:7TM_GPCR_Srv

ptg:102953813 pf:7TM_GPCR_Srx pf:7tm_1

sfm:108928309 pf:CRAL_TRIO_2 pf:Laminin_II pf:RhoGEF pf:PH_19 pf:PH_10 pf:PH pf:IQ_SEC7_PH

csab:103220800 pf:GREB1_N pf:GREB1_2nd pf:cpSF2-GREB1 pf:TAGT pf:GREB1_C

dit:C3V38_04695 pf:HhH-GPD



tup:102473944 pf:TSC22 pf:YabA pf:DivIC pf:ZapB

aez:C3E78_04240 pf:THF_DHG_CYH_C pf:KdpD pf:adh_short pf:KR pf:Epimerase pf:adh_short_C2 pf:ParA

bacu:103008593 pf:7TM_GPCR_Srx pf:7tm_1 pf:7TM_GPCR_Srv

bdi:100824380 pf:Aminotran_3 pf:Rhodanese

cfa:486719 pf:7TM_GPCR_Srx pf:7tm_1 pf:7TM_GPCR_Srv

mamo:A6B35_16495 pf:MTTB

nnu:104610620 pf:Pkinase pf:PK_Tyr_Ser-Thr pf:ABC1 pf:Kinase-like pf:Pkinase_fungal

pfp:PFL1_03954 pf:RabGAP-TBC pf:RabGAP-TBC pf:HTH_WhiA pf:ThiF pf:NAD_binding_7 pf:Shikimate_DH pf:Sacchrp_dh_NADP pf:Rhodanese

soc:105197506 pf:NTF2 pf:RRM_7 pf:RRM_1

vvi:100241227 pf:Myb_DNA-binding pf:DprA_WH

cdk:105098204 pf:7TM_GPCR_Srx pf:7tm_1 pf:7TM_GPCR_Srv

dlu:A6035_15360 pf:HhH-GPD


mlo:mlr8280 pf:MTTB

mtm:MYCTH_2300299 pf:zf-PHD-like pf:PHD pf:Chromo pf:ResIII pf:SNF2-rel_dom pf:DEAD pf:AAA_22 pf:HDA2-3 pf:Helicase_C pf:zf-CCCH_6


tdl:TDEL_0C03480 pf:PPP4R2 pf:BUD22 pf:CDC45

tmu:101354714 pf:7TM_GPCR_Srx pf:7tm_1 pf:7TM_GPCR_Srv

aml:100475730 pf:7TM_GPCR_Srx pf:7tm_1 pf:7TM_GPCR_Srv

cfo:105252111 pf:NTF2 pf:RRM_7 pf:RRM_1

npn:JI59_00050 pf:Helicase_C_4

obr:102701992 pf:AP2 pf:AP2

sgi:SGRAN_1722 pf:Helicase_C_4

smaz:LH19_05155 pf:Helicase_C_4

sphm:G432_18665 pf:AAA_34 pf:ResIII pf:Helicase_C_4

ster:AOA14_00050 pf:MTS pf:AAA_34 pf:ResIII pf:Helicase_C_4

apla:106019526 pf:Vitellogenin_N pf:Vit_open_b-sht pf:DNA_ligase_IV pf:LOC400499 pf:LOC400499 pf:VWD pf:C8

ath:AT5G37720 pf:RRM_3 pf:RRM_1 pf:FoP_duplication

cet:B8281_06350 pf:DUF11 pf:CBM_5_12

dol:Dole_1279 pf:UDPG_MGDP_dh_N pf:Sacchrp_dh_NADP pf:DUF4007 pf:UDPG_MGDP_dh pf:RPAP1_C pf:UDPG_MGDP_dh_C

fcd:110861070 pf:zf-C2H2 pf:zf-C2H2_4 pf:zf-met pf:zf-C2H2_jaz pf:zf-C2H2_6 pf:zf-C2H2 pf:zf-C2H2_4 pf:DUF2321 pf:zf-H2C2_2 pf:zf-C2H2 pf:zf-C2H2_4 pf:DUF1677 pf:zf-met pf:zf-H2C2_2 pf:zf-C2H2 pf:zf-C2H2_4

gtt:GUITHDRAFT_140906 pf:WW pf:ResIII pf:SNF2-rel_dom

hcq:109527632 pf:CHB_HEX_C_1 pf:Fn3_assoc pf:DZR pf:zinc_ribbon_15 pf:DZR pf:zinc_ribbon_2 pf:Ank_2 pf:Ank pf:Ank_4 pf:Ank pf:Ank_4 pf:Ank_3 pf:Ank_5 pf:Ank_2 pf:Ank

mgo:AFA91_23720 pf:DUF4190

mli:MULP_05344 pf:DAC pf:DisA-linker pf:Spc24 pf:APH pf:HHH_2 pf:UPF0758_N pf:HHH

mvs:MVIS_3344 pf:YscJ_FliF pf:YscJ_FliF_C


ocu:100344553 pf:Calsarcin pf:Calsarcin

oto:ADJ79_11200 pf:DNA_ligase_A_M pf:DNA_ligase_OB_2

sma:SAVERM_5650 pf:Sulfatase

strf:ASR50_14760 pf:Lsr2 pf:DUF2330 pf:DUF5894


ztr:MYCGRDRAFT_33196 pf:CwfJ_C_1 pf:CwfJ_C_2

aay:WYH_00793 pf:Helicase_C_4

brp:103868789 pf:TFIIA pf:RRM_1 pf:RRM_1 pf:RRM_7 pf:RRM_5 pf:RRM_7 pf:Nup35_RRM pf:RRM_1 pf:RRM_3 pf:DUF1866

cuh:BJN34_19605 pf:Transgly pf:GCD14_N pf:Transpeptidase pf:BiPBP_C


eai:106847325 pf:7TM_GPCR_Srx pf:7tm_1 pf:7TM_GPCR_Srv

ecb:100146294 pf:7TM_GPCR_Srx pf:7tm_1 pf:7TM_GPCR_Srv

fre:Franean1_5262 pf:RNase_E_G

gag:Glaag_0078 pf:DNA_ligase_A_M pf:DNA_ligase_OB_2

metn:BK008_09635 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

msub:BK009_01330 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:DNA_ligase_OB_2

ncc:104947922 pf:DUF5580_M pf:SPARC_Ca_bdg pf:EF-hand_7 pf:EF-hand_6 pf:EF-hand_1 pf:EF-hand_8 pf:EF-hand_1 pf:EF-hand_5 pf:EF-hand_6