SSDB Best Search Result

Entry:bim:100748641 (1012 a.a.)
Name:DNA ligase 3 isoform X1
KO:K10776 DNA ligase 3

Search Result : 187 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
ame:413086 DNA ligase 3 isoform X1                      K10776    1117     4866     0.729      1019    
tca:656322 ligase III                                   K10776     853     3179     0.573      890     
bmor:101739679 DNA ligase 3                             K10776     998     2923     0.476      1029    
ecb:100071671 DNA ligase 3 isoform X3                   K10776     954     2894     0.531      865     
cpoc:100716163 DNA ligase 3 isoform X3                  K10776    1008     2892     0.546      844     
ptr:454581 DNA ligase 3 isoform X2                      K10776     949     2890     0.524      860     
cjc:100405358 DNA ligase 3 isoform X4                   K10776     954     2887     0.530      862     
mcc:715181 DNA ligase 3                                 K10776    1009     2886     0.530      853     
hsa:3980 DNA ligase 3 isoform alpha precursor           K10776    1009     2883     0.527      852     
ptex:113441537 DNA ligase 3 isoform X1                  K10776     984     2880     0.541      839     
rno:303369 DNA ligase 3 isoform 1                       K10776    1002     2879     0.544      840     
rfq:117012947 DNA ligase 3 isoform X1                   K10776    1015     2875     0.531      859     
pmur:107288940 DNA ligase 3                             K10776     984     2875     0.535      838     
ocu:100344941 DNA ligase 3 isoform X1                   K10776    1046     2875     0.534      858     
dne:112987312 DNA ligase 3                              K10776     992     2874     0.540      839     
clv:102083602 DNA ligase 3                              K10776     994     2872     0.528      873     
mmu:16882 DNA ligase 3 isoform a                        K10776    1012     2869     0.538      852     
apla:101797881 DNA ligase 3 isoform X1                  K10776     980     2868     0.537      836     
xla:398275 ligase III, DNA, ATP-dependent L homeolog    K10776     988     2866     0.524      841     
cfa:491145 DNA ligase 3 isoform X1                      K10776     991     2861     0.547      826     
tgu:100220473 DNA ligase 3 isoform X1                   K10776     979     2859     0.550      823     
fca:101097931 DNA ligase 3 isoform X1                   K10776    1007     2854     0.537      838     
cge:100765011 DNA ligase 3 isoform X1                   K10776    1014     2848     0.532      856     
gga:417530 DNA ligase 3                                 K10776    1008     2848     0.533      836     
xtr:549105 DNA ligase 3                                 K10776     893     2847     0.526      829     
ola:101156760 DNA ligase 3                              K10776    1011     2846     0.517      868     
mdo:100021775 DNA ligase 3                              K10776    1005     2840     0.534      839     
ssc:100626381 DNA ligase 3                              K10776     995     2840     0.530      842     
oas:101113866 DNA ligase 3 isoform X1                   K10776    1002     2830     0.544      799     
bta:514719 DNA ligase 3                                 K10776     943     2826     0.524      839     
tru:101068311 DNA ligase 3                              K10776     998     2801     0.511      856     
nve:5509532 DNA ligase 3                                K10776     946     2779     0.519      854     
amj:102572799 DNA ligase 3                              K10776     906     2770     0.533      825     
dre:563276 DNA ligase 3 isoform X1                      K10776    1011     2760     0.513      850     
spu:581252 DNA ligase 3                                 K10776    1049     2711     0.463      985     
cin:100170070 DNA ligase 3                              K10776     854     2645     0.524      819     
vg:80541330 Chrysodeixis includens nucleopolyhedrovirus            614     2391     0.586      589     
dme:Dmel_CG17227 DNA ligase 3                           K10776     806     2040     0.496      653     
ddi:DDB_G0283857 BRCT domain-containing protein                   1175     1480     0.371      703     
sai:Saci_0788 thermostable DNA ligase                   K10747     598      760     0.312      606     
aae:aq_1394 DNA ligase (ATP dependent)                             585      741     0.303      597     
sshi:J5U23_00068 DNA ligase (ATP, ADP or GTP)           K10747     601      721     0.299      619     
sso:SSO0189 DNA ligase (polydeoxyribonucleotide synthas K10747     601      719     0.298      615     
hbu:Hbut_0421 ATP-dependent DNA ligase                  K10747     608      714     0.303      558     
mse:Msed_0150 DNA ligase I, ATP-dependent Dnl1          K10747     598      710     0.286      608     
yli:2908208 DNA ligase 1                                K10747     711      691     0.260      708     
sto:STK_02230 DNA ligase                                K10747     600      687     0.293      610     
spo:2541849 ATP-dependent DNA replication ligase Cdc17  K10747     768      686     0.271      675     
cel:CELE_C29A12.3 DNA ligase 1                          K10747     773      676     0.251      701     
ehi:EHI_111060 DNA ligase                               K10747     685      671     0.267      709     
kla:KLLA0_D12496g uncharacterized protein               K10747     700      666     0.279      699     
pif:PITG_04709 DNA ligase, putative                               3896      664     0.257      888     
pai:PAE0833 DNA ligase                                  K10747     584      658     0.283      612     
vvi:100256907 DNA ligase 1                              K10747     782      652     0.249      778     
cre:CHLRE_07g325716v5 uncharacterized protein           K10747     973      650     0.298      506     
mdm:103426184 DNA ligase 6                                        1407      649     0.287      557     
ape:APE_1094.1 ADP-dependent DNA ligase                 K10747     602      649     0.298      553     
ppp:112290811 DNA ligase 1                              K10747     776      648     0.256      726     
nta:107805422 DNA ligase 6 isoform X1                             1426      646     0.296      550     
ecu:ECU02_1220 uncharacterized protein                  K10747     589      645     0.291      526     
sce:YDL164C DNA ligase (ATP) CDC9                       K10747     755      644     0.262      717     
zma:100383890 uncharacterized protein LOC100383890      K10747     909      642     0.261      708     
rcu:8265013 DNA ligase 6 isoform X1                               1394      635     0.291      554     
ath:AT1G49250 ATP-dependent DNA ligase                             657      634     0.261      670     
smo:SELMODRAFT_422836 hypothetical protein              K10777    1172      633     0.253      668     
tva:5466150 DNA ligase 1/3 family member family                    679      632     0.279      551     
sly:101249429 DNA ligase 6 isoform X1                             1441      630     0.251      828     
cal:CAALFM_C300830CA DNA ligase (ATP)                   K10747     770      630     0.249      698     
osa:4348965 DNA ligase 1 isoform X1                     K10747     916      628     0.249      727     
ani:ANIA_00097 DNA ligase (ATP) DNL4                    K10777    1009      628     0.255      772     
cne:CNI04170 DNA ligase, putative                       K10747     803      628     0.248      793     
ag:ABS72370 DNA ligase (ATP, ADP or GTP) (EC:6.5.1.7)   K10747     606      627     0.305      491     
mtr:25492370 DNA ligase 1                               K10747     777      625     0.251      702     
nmr:Nmar_1037 DNA ligase I, ATP-dependent Dnl1          K10747     588      623     0.254      610     
ppa:PAS_chr3_1112 DNA ligase found in the nucleus and m K10747     744      622     0.294      520     
cit:102618631 DNA ligase 6 isoform X1                             1402      619     0.290      566     
sot:102603887 DNA ligase 1                                        1441      619     0.276      631     
gmx:100783155 DNA ligase 1                              K10747     776      619     0.246      735     
afm:AFUA_5G12050 DNA ligase                             K10777     979      614     0.244      918     
mac:MA_0728 DNA ligase (ATP)                                       580      614     0.268      600     
smm:Smp_019840.1 DNA ligase I, putative                            783      611     0.250      780     
fgr:FGSG_05453 DNA ligase                               K10747     867      611     0.236      855     
pti:PHATR_51005 hypothetical protein                    K10747     651      610     0.282      556     
aor:AO090120000322 unnamed protein product; ATP-depende K10777    1006      607     0.253      738     
csv:101213447 DNA ligase 1                              K10747     801      604     0.249      630     
fvr:FVEG_07075 DNA ligase 1                             K10747     916      603     0.246      853     
mma:MM_1895 ATP-dependent DNA ligase                               579      602     0.270      596     
pto:PTO0672 DNA ligase                                  K10747     590      598     0.261      605     
gla:GL50803_007649 DNA ligase (ATP)                                810      596     0.247      754     
tre:TRIREDRAFT_22881 DNA ligase                         K10747     877      594     0.245      812     
tcr:506835.120 DNA ligase I                             K10747     701      592     0.258      546     
lma:LMJF_30_3440 putative DNA ligase I                  K10747     681      591     0.268      549     
tbr:Tb927.6.4780 DNA ligase I, putative                 K10747     699      590     0.261      552     
tps:THAPSDRAFT_268404 ligase                            K10747     633      583     0.304      415     
mba:Mbar_A1643 DNA ligase (ATP)                                    549      577     0.283      569     
maj:MAA_03560 DNA ligase (Polydeoxyribonucleotide synth K10747     898      573     0.244      774     
mmg:MTBMA_c01660 ATP-dependent DNA ligase               K10747     551      570     0.261      591     
uma:UMAG_11196 putative DNA ligase I                    K10747     851      567     0.242      773     
mja:MJ_0171 DNA ligase (lig)                            K10747     573      565     0.268      608     
pfa:PF3D7_1304100 DNA ligase I                          K10747     912      562     0.257      635     
tac:Ta1148 DNA ligase related protein                   K10747     588      561     0.266      608     
mgr:MGG_12899 DNA ligase 4                              K10777    1001      560     0.254      625     
ncr:NCU06481 DNA ligase                                 K10747     923      558     0.287      485     
pab:PAB2002 lig DNA ligase                              K10747     559      557     0.254      590     
aag:23687986 DNA ligase 1 isoform X2                    K10747     905      551     0.241      805     
aga:1280180 DNA ligase 1 isoform X1                     K10747     899      546     0.252      737     
pfu:PF1635 DNA ligase (lig)                             K10747     561      539     0.266      542     
mth:MTH_1580 DNA ligase                                 K10747     561      538     0.253      592     
pho:PH1622 559aa long hypothetical DNA ligase           K10747     559      523     0.260      543     
hth:HTH_1466 DNA ligase                                            572      510     0.260      604     
afu:AF_0623 DNA ligase (lig)                            K10747     556      502     0.253      594     
hma:rrnAC0463 DNA ligase                                K10747     554      498     0.267      595     
tko:TK2140 ATP-dependent DNA ligase                     K10747     562      496     0.260      542     
sen:SACE_0911 DNA ligase I, ATP-dependent (dnl1)                   510      472     0.270      486     
amd:AMED_8064 ATP-dependent DNA ligase                             510      466     0.270      445     
rha:RHA1_ro01648 DNA ligase (ATP)                                  503      456     0.259      541     
mmp:MMP0970 ATP-dependent DNA ligase                    K10747     573      456     0.255      608     
hal:VNG_0881G DNA ligase                                K10747     561      452     0.265      487     
ccyc:SCMU_30200 DNA ligase                                         511      445     0.269      554     
sco:SCO1202 putative DNA ligase                                    512      440     0.271      502     
scl:sce6857 DNA ligase                                             533      436     0.281      526     
nfa:NFA_52520 putative ATP-dependent DNA ligase                    523      430     0.253      525     
gpo:GPOL_c02790 DNA ligase Lig                                     511      422     0.265      505     
ase:ACPL_1298 ATP-dependent DNA ligase                             515      417     0.258      489     
sro:Sros_7176 ATP-dependent DNA ligase                             508      415     0.254      477     
hvo:HVO_1565 DNA ligase (ATP)                           K10747     585      406     0.248      536     
mva:Mvan_2025 DNA ligase I, ATP-dependent Dnl1                     534      405     0.267      494     
sgu:SGLAU_04800 putative DNA ligase                                512      400     0.269      479     
kfl:Kfla_3406 DNA ligase I, ATP-dependent Dnl1                     517      396     0.248      492     
msm:MSMEG_2277 DNA ligase I, ATP-dependent                         509      396     0.265      480     
nca:Noca_2845 DNA ligase I, ATP-dependent Dnl1                     509      380     0.277      364     
mtc:MT3148 DNA ligase                                              507      380     0.255      478     
mtu:Rv3062 DNA ligase                                              507      377     0.255      478     
mmi:MMAR_1623 ATP-dependent DNA ligase LigB                        501      366     0.240      480     
sma:SAVERM_7136 putative DNA ligase                                512      366     0.277      368     
phe:Phep_2562 ATP dependent DNA ligase                             535      365     0.232      586     
sgr:SGR_6320 putative DNA ligase                                   511      364     0.266      500     
sct:SCAT_0666 putative DNA ligase                                  517      362     0.288      372     
xom:XOO1771 DNA ligase                                             534      357     0.244      500     
mul:MUL_3413 ATP-dependent DNA ligase LigB                         513      344     0.240      480     
xac:XAC1341 DNA ligase                                             534      341     0.245      502     
sml:Smlt3530 putative ATP-DEPENDENT DNA LIGASE LIGB (PO            535      332     0.244      501     
xcc:XCC1290 DNA ligase                                             534      331     0.235      503     
sur:STAUR_6767 DNA ligase, ATP-dependent                           531      325     0.224      580     
rsp:RSP_2413 DNA ligase                                            533      316     0.247      595     
pde:Pden_0412 ATP dependent DNA ligase                             514      315     0.234      586     
nar:Saro_0068 DNA ligase (ATP)                                     531      315     0.268      452     
rle:RL1294 putative DNA ligase                                     541      310     0.248      525     
ret:RHE_CH01164 probable DNA ligase (ATP) protein                  541      308     0.242      525     
mxa:MXAN_6074 DNA ligase, ATP-dependent                            531      301     0.216      588     
sjp:SJA_C1-17220 ATP-dependent DNA ligase                          527      295     0.234      500     
atu:Atu0840 ATP-dependent DNA ligase                               541      294     0.252      528     
ssy:SLG_11070 DNA ligase                                           538      288     0.237      506     
swi:Swit_3979 DNA ligase (ATP)                                     532      282     0.228      591     
zga:ZOBELLIA_2113 DNA ligase                                       554      276     0.278      335     
bxe:Bxe_B1315 DNA ligase (ATP)                                     558      276     0.243      510     
ppu:PP_1105 putative DNA ligase, ATP-dependent                     552      268     0.241      557     
reu:Reut_B3895 DNA ligase (ATP)                                    551      262     0.240      346     
sme:SMc03177 Putative DNA ligase                                   537      248     0.242      528     
rpa:TX73_004135 ATP-dependent DNA ligase                           621      245     0.260      373     
cpy:Cphy_1729 DNA ligase D                              K01971     813      242     0.218      582     
mea:Mex_1p3448 putative ATP-dependent DNA ligase                   635      241     0.248      500     
mlo:mll5481 probable DNA ligase                                    541      239     0.239      506     
sno:Snov_0068 ATP dependent DNA ligase                             568      238     0.247      519     
rer:RER_45220 ATP-dependent DNA ligase LigD             K01971     758      235     0.276      341     
reh:H16_B2352 ATP-dependent DNA ligase                  K01971     910      235     0.256      363     
stp:Strop_1546 ATP dependent DNA ligase                            369      231     0.268      362     
mta:Moth_1488 ATP dependent DNA ligase, central                    320      230     0.259      355     
xau:Xaut_1470 ATP dependent DNA ligase                             542      228     0.235      540     
psb:Psyr_3245 ATP-dependent DNA ligase LigD phosphoeste K01971     866      226     0.227      401     
mab:MAB_1033 Putative ATP-dependent DNA ligase          K01971     750      225     0.272      261     
bja:bll1144 ORF_ID:bll1144; putative ATP dependent DNA             625      225     0.246      382     
pst:PSPTO_3464 DNA ligase, ATP-dependent, putative      K01971     851      221     0.232      298     
azc:AZC_0393 putative ATP dependent DNA ligase                     552      216     0.229      515     
ccr:CC_3610 DNA ligase, ATP-dependent, putative                    541      214     0.265      359     
dsy:DSY0616 hypothetical protein                        K01971     818      212     0.219      384     
brh:RBRH_00476 ATP-dependent DNA ligase (EC 6.5.1.1)    K01971    1123      204     0.232      371     
pae:PA2138 multifunctional non-homologous end joining p K01971     840      201     0.244      328     
bsu:BSU20500 DNA ligase-like protein LigB                          270      201     0.258      267     
tex:Teth514_0952 ATP dependent DNA ligase               K01971     307      191     0.252      305     
chy:CHY_0026 putative DNA ligase, ATP-dependent                    270      185     0.296      179     
bpf:BpOF4_20089 ATP-dependent DNA ligase                           222      172     0.308      159     
ttm:Tthe_0704 ATP dependent DNA ligase                  K01971     307      158     0.245      290     
oih:OB3034 hypothetical conserved protein               K01971     595      158     0.264      212     
pjd:Pjdr2_1127 ATP dependent DNA ligase                            287      156     0.273      187     
eba:ebA6655 ATP-dependent DNA ligase                    K01971     742      150     0.258      217     
cvi:CV_2476 probable signal peptide protein                        332      118     0.257      175     

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