SSDB Best Search Result

KEGG ID :bsu:BSU_misc_RNA_52 (149 n.t.)
Definition:hypothetical protein
Update status:T00010 (agi,amil,anp,bez,bgz,bman,cof,dmn,elk,fad,hhk,labp,lhf,lug,marj,mclo,mich,mick,mum,noi,ocd,paga,paut,peu,pkz,pot,prag,rgl,rhf,rsy,sald,salz,sphz,spik,sros,sthr,talb,yti : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
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Search Result : 37 hits

                 Entry                                       KO      len   SW-score(margin)  bits  identity overlap  best(all)
------------------------------------------------------------------ -------------------------------------------------------------
bacl:BS34A_34010 ydaO-yuaA                                         149      745 (  500)     176    1.000    149     <-> 2
bama:RBAU_misc_RNA_7 ydaO-yuaA                                     147      246 (    -)      62    0.707    150      -> 1
baml:BAM5036_miscRNA7 ydaO-yuaA                                    147      246 (    -)      62    0.707    150      -> 1
bamn:BASU_misc_RNA_7 ydaO-yuaA                                     147      246 (    -)      62    0.707    150      -> 1
mcq:BN44_misc_RNA_1 ydaO-yuaA                                      223      166 (    -)      44    0.864    44      <-> 1
mcv:BN43_misc_RNA_1 ydaO-yuaA                                      223      166 (    -)      44    0.864    44      <-> 1
mcx:BN42_misc_RNA_1 ydaO-yuaA                                      223      166 (    -)      44    0.864    44      <-> 1
mcz:BN45_misc_RNA_1 ydaO-yuaA                                      223      166 (    -)      44    0.864    44      <-> 1
sus:Acid_R0042 ydaO/yuaA element as predicted by Rfam (            126      157 (    -)      42    0.763    59      <-> 1
mta:Moth_R0024 ydaO/yuaA element as predicted by Rfam (            128      156 (   19)      41    0.718    78       -> 6
tae:TepiRe1miscRNA_2 ydaO-yuaA                                     168      151 (    -)      40    0.625    152      -> 1
ter:Tery_R0034 ydaO/yuaA element as predicted by Rfam (            185      143 (    -)      38    0.626    139      -> 1
rer:RER_misc0110 ydaO/yuaA leader                                  221      138 (    -)      37    0.737    57       -> 1
sct:SCAT_misc_RNA_14 ydaO-yuaA                                     158      136 (   15)      37    0.746    59      <-> 2
mmar:MODMU_misc_RNA_2 ydaO-yuaA                                    122      125 (   18)      34    0.643    70       -> 4
ctet:BN906_02279 ydaO-yuaA                                         139      124 (    6)      34    0.676    71      <-> 2
spse:SULPSESMR1_02840 23S ribosomal RNA                           2829      116 (    0)      32    0.615    91       -> 2
sfu:Sfum_R0039 ydaO/yuaA element as predicted by Rfam (            133      114 (    -)      32    0.639    72       -> 1
dau:Daud_R0025 ydaO/yuaA element as predicted by Rfam (            138      112 (    -)      31    0.649    74       -> 1
fal:FRAALmisc_RNA_5 ydaO-yuaA                                      172      111 (    -)      31    0.818    33       -> 1
mlac:CP520_01860 23S ribosomal RNA                      K01980    2916      110 (    0)      31    0.612    121      -> 3
paro:CUV01_02380 23S ribosomal RNA                                2848      110 (    0)      31    0.617    94       -> 2
bsd:BLASA_misc_RNA_2 ydaO-yuaA                                     148      109 (    8)      31    0.862    29       -> 2
muc:MuYL_r047 23S ribosomal RNA                                   2873      107 (    -)      30    0.598    112      -> 1
pfa:PF3D7_0829800 uncharacterized ncRNA                           2739      107 (    -)      30    0.794    34       -> 1
lco:109137478 inter-alpha-trypsin inhibitor heavy chain            381      106 (    -)      30    0.628    86      <-> 1
pcb:MAL9_28S_rRNA ribosomal RNA                         K01982    3758      106 (    -)      30    0.644    59       -> 1
pser:tRNA-Arg-1 tRNA-Arg                                         900074      105 (    -)      30    0.733    45       -> 1
ncr:NCU17409 18S ribosomal RNA                          K01979    1770      104 (    -)      30    0.658    73       -> 1
pbe:berg05_28s ribosomal RNA                                      3958      104 (    0)      30    0.583    103      -> 2
pseb:EOK75_07465 23S ribosomal RNA                                2845      104 (    0)      30    0.607    112      -> 4
cmar:IMCC12053_3177 23S ribosomal RNA                   K01980    2847      101 (    0)      29    0.626    91       -> 2
kro:BVG79_r0002 23S ribosomal RNA                                 2846      101 (    0)      29    0.616    73       -> 6
sit:TM1040_R0005 23S ribosomal RNA                      K01980    2844      101 (    0)      29    0.707    58       -> 5
ssab:SSABA_v1r020 23S ribosomal RNA                     K01980    2912      101 (    0)      29    0.603    121      -> 2
ath:AT4G12917 other RNA                                            553      100 (    -)      29    0.643    56      <-> 1
dme:Dmel_CR46029 antisense RNA:CR46029                            7622      100 (    -)      29    0.647    68       -> 1

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