SSDB Best Search Result

Entry:mpt:Mpe_B0011 (864 a.a.)
Name:ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module
KO:K01971 bifunctional non-homologous end joining protein LigD

Search Result : 215 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
reu:Reut_B4424 ATP-dependent DNA ligase LigD polymerase K01971     930     3520     0.609      849     
reh:H16_B2352 ATP-dependent DNA ligase                  K01971     910     3024     0.531      890     
pst:PSPTO_3464 DNA ligase, ATP-dependent, putative      K01971     851     2700     0.479      861     
ppu:PP_3260 DNA ligase D                                K01971     833     2697     0.488      850     
psb:Psyr_3245 ATP-dependent DNA ligase LigD phosphoeste K01971     866     2686     0.478      870     
pae:PA2138 multifunctional non-homologous end joining p K01971     840     2567     0.462      851     
bxe:Bxe_A2328 ATP-dependent DNA ligase LigD phosphoeste K01971    1001     2551     0.442      998     
brh:RBRH_00476 ATP-dependent DNA ligase (EC 6.5.1.1)    K01971    1123     2504     0.492      837     
mlo:mll4606 ATP-dependent DNA ligase                    K01971     829     2210     0.436      848     
sme:SMc03959 Probable ATP-dependent DNA ligase          K01971     865     2111     0.400      873     
bps:BPSS2211 putative ATP-dependent DNA ligase          K01971    1159     2071     0.382      1100    
ssy:SLG_04290 putative DNA ligase                       K01971     835     2067     0.405      857     
azc:AZC_1006 ATP-dependent DNA ligase                   K01971     900     2059     0.400      909     
sno:Snov_0819 DNA ligase D                              K01971     842     2057     0.400      857     
rsp:RSP_2679 ATP-dependent DNA ligase LigD polymerase m K01971     868     2015     0.400      867     
sml:Smlt0053 putative ATP-dependent DNA ligase          K01971     828     2008     0.405      845     
xau:Xaut_4365 DNA ligase D                              K01971     886     1997     0.393      912     
atu:Atu4632 ATP-dependent DNA ligase                    K01971     771     1971     0.421      789     
swi:Swit_3982 DNA ligase D                              K01971     837     1966     0.405      859     
sjp:SJA_C1-12900 ATP-dependent DNA ligase               K01971     829     1959     0.393      860     
ret:RHE_PE00252 putative ATP-dependent DNA ligase prote K01971     882     1932     0.392      901     
rle:pRL120229 putative DNA ligase family protein        K01971     881     1931     0.392      903     
dsy:DSY0616 hypothetical protein                        K01971     818     1929     0.377      855     
cpy:Cphy_1729 DNA ligase D                              K01971     813     1923     0.367      851     
bja:bll6773 ORF_ID:bll6773; probable DNA ligase         K01971     892     1923     0.383      907     
nar:Saro_1695 ATP-dependent DNA ligase LigD phosphoeste K01971     843     1885     0.385      862     
rpa:TX73_018915 DNA ligase D                            K01971     914     1844     0.370      928     
xac:XAC2414 ATP-dependent DNA ligase                    K01971     872     1766     0.359      885     
xcc:XCC2307 ATP-dependent DNA ligase                    K01971     849     1740     0.364      860     
sur:STAUR_6997 ATP dependent DNA ligase                 K01971     836     1676     0.363      882     
phe:Phep_1702 DNA ligase D                              K01971     877     1654     0.349      866     
eba:ebA6655 ATP-dependent DNA ligase                    K01971     742     1628     0.350      899     
scl:sce3523 unnamed protein product; High confidence in K01971     762     1609     0.398      691     
amd:AMED_3255 ATP-dependent DNA ligase                  K01971     670      948     0.323      634     
mmi:MMAR_4573 ATP dependent DNA ligase                  K01971     770      948     0.350      546     
mul:MUL_4434 ATP dependent DNA ligase                   K01971     770      937     0.348      546     
mab:MAB_1033 Putative ATP-dependent DNA ligase          K01971     750      932     0.345      542     
nfa:NFA_6770 putative ATP-dependent DNA ligase          K01971     808      925     0.360      545     
mtu:Rv0938 multifunctional non-homologous end joining D K01971     759      903     0.342      547     
mtc:MT0965 conserved hypothetical protein/DNA ligase    K01971     759      902     0.342      547     
mva:Mvan_4915 ATP-dependent DNA ligase LigD ligase modu K01971     763      869     0.349      544     
ccyc:SCMU_35490 ATP-dependent DNA ligase                K01971     899      866     0.332      590     
gpo:GPOL_c05170 putative ATP-dependent DNA ligase       K01971     812      853     0.336      547     
rha:RHA1_ro05048 DNA ligase (ATP)                       K01971     766      842     0.333      540     
rer:RER_45220 ATP-dependent DNA ligase LigD             K01971     758      839     0.361      559     
msm:MSMEG_5570 DNA ligase                               K01971     755      793     0.313      550     
vg:26737567 Sinorhizobium phage phiLM21; non-homologous K01971     330      734     0.361      327     
sen:SACE_4181 ATP dependent DNA ligase                  K01971     647      731     0.279      850     
sct:SCAT_5457 DNA polymerase LigD, ligase domain                   313      717     0.377      324     
pde:Pden_4186 conserved hypothetical protein            K01971     330      685     0.354      316     
pfl:PFL_6269 Hypothetical protein                       K01971     186      659     0.548      177     
bha:BH2209 BH2209; unknown conserved protein            K01971     611      613     0.259      646     
sgu:SGLAU_27360 DNA polymerase LigD, polymerase domain- K01971     308      610     0.354      305     
oih:OB3034 hypothetical conserved protein               K01971     595      603     0.246      633     
bsu:BSU13400 ATP-dependent DNA ligase YkoU              K01971     611      593     0.244      630     
sco:SCO6498 conserved hypothetical protein SC1E6.07     K01971     319      587     0.341      296     
det:DET0850 conserved hypothetical protein                         183      568     0.485      194     
mta:Moth_2082 conserved hypothetical protein            K01971     306      562     0.323      294     
sma:SAVERM_1696 putative DNA primase, small subunit                338      541     0.338      281     
bpf:BpOF4_18445 ATP-dependent DNA ligase                K01971     578      539     0.263      558     
chy:CHY_0025 conserved hypothetical protein             K01971     293      535     0.304      289     
ase:ACPL_519 DNA ligase (ATP)                           K01971     301      513     0.319      276     
stp:Strop_1543 DNA primase, small subunit                          341      495     0.339      254     
kfl:Kfla_5357 DNA polymerase LigD, polymerase domain pr K01971     308      493     0.321      271     
sro:Sros_6714 DNA primase small subunit                            334      492     0.335      245     
nca:Noca_2445 putative DNA ligase (ATP), C-terminal                326      480     0.331      263     
sgr:SGR_2196 conserved hypothetical protein             K01971     296      478     0.342      269     
mma:MM_0209 hypothetical protein                                   152      465     0.481      160     
mac:MA_3428 conserved hypothetical protein                         156      460     0.463      162     
mba:Mbar_A2115 conserved hypothetical protein                      151      458     0.462      158     
afu:AF_1725 DNA ligase, putative                        K01971     313      441     0.325      317     
pjd:Pjdr2_4985 DNA polymerase LigD, polymerase domain p K01971     304      428     0.316      247     
hvo:HVO_1565 DNA ligase (ATP)                           K10747     585      366     0.320      369     
tex:Teth514_0952 ATP dependent DNA ligase               K01971     307      360     0.304      309     
pfu:PF1635 DNA ligase (lig)                             K10747     561      354     0.274      361     
pab:PAB2002 lig DNA ligase                              K10747     559      349     0.282      376     
mcc:718528 DNA ligase 1 isoform X1                      K10747     919      339     0.271      457     
mth:MTH_1580 DNA ligase                                 K10747     561      339     0.291      358     
hsa:3978 DNA ligase 1 isoform 1                         K10747     919      330     0.269      457     
ksk:KSE_05320 hypothetical protein                      K01971     173      329     0.353      153     
mmg:MTBMA_c01660 ATP-dependent DNA ligase               K10747     551      329     0.289      353     
ecb:100053186 DNA ligase 1 isoform X1                   K10747     912      329     0.297      330     
ptr:468936 DNA ligase 1 isoform X4                      K10747     919      329     0.291      327     
ttm:Tthe_0704 ATP dependent DNA ligase                  K01971     307      328     0.282      319     
cpoc:100734013 DNA ligase 1                             K10747     919      327     0.270      352     
ocu:100340979 DNA ligase 1 isoform X1                   K10747     915      326     0.287      327     
fca:101093313 DNA ligase 1 isoform X4                   K10747     912      323     0.274      347     
mmu:16881 DNA ligase 1                                  K10747     916      322     0.291      327     
cge:100767365 DNA ligase 1 isoform X2                   K10747     931      321     0.291      327     
rfq:117035168 LOW QUALITY PROTEIN: DNA ligase 1         K10747    1060      320     0.284      327     
cfa:100686967 DNA ligase 1 isoform X1                   K10747     913      320     0.291      330     
hma:rrnAC0463 DNA ligase                                K10747     554      320     0.291      357     
oas:101104173 DNA ligase 1 isoform X4                   K10747     958      318     0.271      350     
bta:100124507 DNA ligase 1                              K10747     916      318     0.271      350     
ssc:100520434 DNA ligase 1                              K10747     923      318     0.265      355     
rno:81513 DNA ligase 1                                  K10747     913      318     0.284      327     
hal:VNG_0881G DNA ligase                                K10747     561      318     0.294      398     
tac:Ta1148 DNA ligase related protein                   K10747     588      317     0.289      360     
tko:TK2140 ATP-dependent DNA ligase                     K10747     562      315     0.260      361     
hth:HTH_1466 DNA ligase                                            572      313     0.250      360     
ag:CAC21199 DNA ligase (ATP or NAD+) (EC:6.5.1.6)       K10747     559      309     0.258      361     
mdo:100616962 DNA ligase 1-like                                    632      309     0.252      409     
amj:102566879 DNA ligase 1                              K10747     954      307     0.260      327     
cjc:100415094 DNA ligase 1 isoform X1                   K10747     919      306     0.278      327     
pho:PH1622 559aa long hypothetical DNA ligase           K10747     559      304     0.263      376     
hbu:Hbut_0421 ATP-dependent DNA ligase                  K10747     608      302     0.263      377     
ppa:PAS_chr3_1112 DNA ligase found in the nucleus and m K10747     744      300     0.278      360     
tca:658633 DNA ligase                                   K10747     756      299     0.268      332     
pai:PAE0833 DNA ligase                                  K10747     584      299     0.264      409     
mja:MJ_0171 DNA ligase (lig)                            K10747     573      298     0.264      367     
gga:430516 DNA ligase 1 isoform X4                      K10747     775      289     0.263      327     
apla:101796914 DNA ligase 1 isoform X1                  K10747     775      287     0.247      458     
vvi:100266816 DNA ligase 6 isoform X1                             1449      282     0.255      376     
sai:Saci_0788 thermostable DNA ligase                   K10747     598      282     0.261      345     
tcr:506945.80 DNA ligase I                              K10747     699      280     0.258      368     
dre:556995 DNA ligase 1                                 K10747    1058      279     0.268      332     
ehi:EHI_111060 DNA ligase                               K10747     685      277     0.277      364     
ecu:ECU02_1220 uncharacterized protein                  K10747     589      277     0.241      481     
pif:PITG_04709 DNA ligase, putative                               3896      276     0.269      350     
tbr:Tb927.6.4780 DNA ligase I, putative                 K10747     699      275     0.251      370     
afm:AFUA_2G09010 DNA ligase Cdc9                        K10747     909      273     0.253      396     
pmur:107285325 DNA ligase 1                             K10747     944      272     0.250      332     
ola:101167483 DNA ligase 1                              K10747     993      267     0.265      328     
smo:SELMODRAFT_97261 hypothetical protein                          620      267     0.257      369     
xtr:100271763 DNA ligase 1                              K10747    1040      267     0.251      327     
dne:112995498 DNA ligase 1                              K10747     868      265     0.253      328     
kla:KLLA0_D12496g uncharacterized protein               K10747     700      265     0.258      365     
ptex:113448488 DNA ligase 1 isoform X1                  K10747     941      263     0.234      325     
sot:102603887 DNA ligase 1                                        1441      262     0.271      395     
rcu:8265013 DNA ligase 6 isoform X1                               1394      262     0.260      373     
cel:CELE_C29A12.3 DNA ligase 1                          K10747     773      262     0.241      419     
xla:397978 DNA ligase 1                                 K10747    1070      260     0.251      327     
sly:101249429 DNA ligase 6 isoform X1                             1441      258     0.271      395     
aag:23687785 DNA ligase 4                               K10777     941      258     0.239      493     
ddi:DDB_G0283857 BRCT domain-containing protein                   1175      257     0.224      375     
cne:CNI04170 DNA ligase, putative                       K10747     803      257     0.255      364     
spu:752989 DNA ligase 1 isoform X1                      K10747     715      254     0.257      327     
pto:PTO0672 DNA ligase                                  K10747     590      251     0.244      348     
mmp:MMP0970 ATP-dependent DNA ligase                    K10747     573      250     0.240      363     
nta:107805422 DNA ligase 6 isoform X1                             1426      249     0.251      402     
clv:102083602 DNA ligase 3                              K10776     994      248     0.243      461     
tgu:100220473 DNA ligase 3 isoform X1                   K10776     979      248     0.245      461     
ame:413086 DNA ligase 3 isoform X1                      K10776    1117      246     0.248      468     
nmr:Nmar_1037 DNA ligase I, ATP-dependent Dnl1          K10747     588      246     0.234      333     
dme:Dmel_CG17227 DNA ligase 3                           K10776     806      246     0.243      387     
lma:LMJF_30_3440 putative DNA ligase I                  K10747     681      244     0.251      379     
zma:103651343 DNA ligase 6                                        1397      243     0.244      401     
ani:ANIA_06069 hypothetical protein                     K10747     932      240     0.255      341     
sto:STK_02230 DNA ligase                                K10747     600      240     0.245      457     
mse:Msed_0150 DNA ligase I, ATP-dependent Dnl1          K10747     598      238     0.253      372     
ape:APE_1094.1 ADP-dependent DNA ligase                 K10747     602      238     0.252      408     
tru:101068311 DNA ligase 3                              K10776     998      237     0.246      455     
gmx:100807673 DNA ligase 6 isoform X1                             1402      237     0.263      372     
osa:4324149 DNA ligase 6 isoform X1                               1404      237     0.250      400     
mdm:103426184 DNA ligase 6                                        1407      236     0.249      377     
cit:102618631 DNA ligase 6 isoform X1                             1402      236     0.235      375     
yli:2911076 DNA ligase 4                                K10777     956      235     0.267      374     
sce:YOR005C DNA ligase (ATP) DNL4                       K10777     944      233     0.283      230     
sshi:J5U23_00068 DNA ligase (ATP, ADP or GTP)           K10747     601      230     0.228      356     
cin:100181519 DNA ligase 1-like                         K10747    1060      230     0.244      332     
nve:5510104 DNA ligase 1                                K10747     959      230     0.241      357     
aga:1271687 DNA ligase 4                                K10777     914      230     0.220      576     
uma:UMAG_11196 putative DNA ligase I                    K10747     851      230     0.240      371     
aor:AO090011000796 unnamed protein product; ATP-depende K10747     882      229     0.266      350     
pfa:PF3D7_1304100 DNA ligase I                          K10747     912      227     0.238      328     
ath:AT1G66730 DNA LIGASE 6                                        1396      226     0.236      369     
sso:SSO0189 DNA ligase (polydeoxyribonucleotide synthas K10747     601      225     0.236      356     
ncr:NCU06481 DNA ligase                                 K10747     923      224     0.251      386     
tva:5466150 DNA ligase 1/3 family member family                    679      224     0.242      376     
cre:CHLRE_07g325716v5 uncharacterized protein           K10747     973      222     0.234      325     
mxa:MXAN_6074 DNA ligase, ATP-dependent                            531      220     0.281      335     
mtr:25492370 DNA ligase 1                               K10747     777      215     0.253      328     
cal:CAALFM_C300830CA DNA ligase (ATP)                   K10747     770      213     0.252      326     
ccr:CC_3610 DNA ligase, ATP-dependent, putative                    541      213     0.252      318     
smm:Smp_019840.1 DNA ligase I, putative                            783      212     0.242      293     
vvu:VV1_2657 ATP-dependent DNA ligase                   K26441     280      212     0.296      243     
aae:aq_1394 DNA ligase (ATP dependent)                             585      212     0.237      367     
mea:Mex_1p3448 putative ATP-dependent DNA ligase                   635      211     0.266      323     
xom:XOO2587 conserved hypothetical protein              K01971     116      209     0.507      67      
spo:2541849 ATP-dependent DNA replication ligase Cdc17  K10747     768      209     0.229      423     
bmor:101739080 DNA ligase 1 isoform X1                  K10747     885      208     0.271      340     
ppp:112290811 DNA ligase 1                              K10747     776      208     0.244      328     
alv:Alvin_0262 ATP dependent DNA ligase                 K26441     320      207     0.304      227     
tre:TRIREDRAFT_58509 DNA ligase                         K10777     960      200     0.223      462     
maj:MAA_03560 DNA ligase (Polydeoxyribonucleotide synth K10747     898      198     0.236      343     
csv:101213447 DNA ligase 1                              K10747     801      197     0.244      357     
pti:PHATR_51005 hypothetical protein                    K10747     651      197     0.257      319     
fvr:FVEG_04990 DNA ligase 1                                        879      196     0.271      203     
ctt:CtCNB1_1783 ATP dependent DNA ligase                K26441     279      194     0.298      225     
tps:THAPSDRAFT_268404 ligase                            K10747     633      194     0.256      340     
mgr:MGG_12899 DNA ligase 4                              K10777    1001      192     0.240      379     
vpa:VP1477 DNA ligase                                   K26441     280      190     0.290      241     
vfi:VF_1450 DNA ligase                                  K26441     285      189     0.280      250     
fgr:FGSG_05453 DNA ligase                               K10747     867      187     0.243      333     
zga:ZOBELLIA_2113 DNA ligase                                       554      185     0.229      306     
gla:GL50803_007649 DNA ligase (ATP)                                810      175     0.250      348     
tgo:TGME49_208580 DNA ligase 1, putative                K10747    1331      173     0.248      367     
abo:ABO_2702 DNA ligase (ATP)                           K26441     283      167     0.283      240     
vch:VC_1542 DNA ligase                                  K26441     282      167     0.300      217     
son:SO_2204 DNA ligase ATP-dependent                    K26441     311      166     0.262      225     
ser:SERP1534 DNA ligase, ATP-dependent                             432      150     0.256      238     
pdi:BDI_0474 glycoside hydrolase family 2, candidate be            604      149     0.231      277     
cps:CPS_4404 DNA ligase, ATP-dependent                  K26441     292      147     0.260      235     
cje:Cj1669c ATP-dependent DNA ligase                    K26441     282      146     0.244      213     
cgl:Cgl0248 Isopropylmalate/homocitrate/citramalate syn K01649     616      136     0.216      328     
ngo:NGO_2034 DNA ligase                                 K26441     274      135     0.255      259     
nme:NMB2048 DNA ligase                                  K26441     274      134     0.253      257     
eam:EAMY_3543 glutathione oxidoreductase                K00383     451      128     0.259      316     
sty:HCM2.0035c putative DNA ligase                                 440      126     0.244      303     
sfl:SF0004 threonine synthase                           K01733     428      125     0.232      272     
cvi:CV_1790 conserved hypothetical protein              K09786     426      124     0.256      254     
pmu:PM0400 YfeA                                         K11604     293      122     0.252      234     
ypk:Y1095.pl unknown                                               365      120     0.240      300     
lil:LA_0984 ATP-dependent DNA ligase                    K01971     501      118     0.238      164     
cpe:CPE1502 hypothetical protein 10C                    K01448     337      114     0.253      170     

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