SSDB Best Search Result

Entry:pap:PSPA7_3173 (847 a.a.)
Name:DNA ligase D
KO:K01971 bifunctional non-homologous end joining protein LigD

Search Result : 212 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
pae:PA2138 multifunctional non-homologous end joining p K01971     840     5412     0.943      848     
ppu:PP_3260 DNA ligase D                                K01971     833     3263     0.574      843     
pst:PSPTO_3464 DNA ligase, ATP-dependent, putative      K01971     851     3182     0.567      853     
psb:Psyr_3245 ATP-dependent DNA ligase LigD phosphoeste K01971     866     3166     0.561      866     
brh:RBRH_00476 ATP-dependent DNA ligase (EC 6.5.1.1)    K01971    1123     2988     0.570      807     
reh:H16_B2352 ATP-dependent DNA ligase                  K01971     910     2915     0.534      860     
reu:Reut_B5079 ATP-dependent DNA ligase LigD phosphoest K01971     901     2778     0.506      872     
bxe:Bxe_A2328 ATP-dependent DNA ligase LigD phosphoeste K01971    1001     2657     0.456      997     
bps:BPSS2211 putative ATP-dependent DNA ligase          K01971    1159     2464     0.428      1123    
sno:Snov_0819 DNA ligase D                              K01971     842     2248     0.446      861     
mlo:mll4606 ATP-dependent DNA ligase                    K01971     829     2130     0.435      833     
atu:Atu5055 ATP-dependent DNA ligase                    K01971     884     2125     0.404      893     
azc:AZC_1006 ATP-dependent DNA ligase                   K01971     900     2107     0.411      912     
sme:SMc03959 Probable ATP-dependent DNA ligase          K01971     865     2074     0.415      866     
xau:Xaut_4365 DNA ligase D                              K01971     886     2060     0.405      899     
ssy:SLG_04290 putative DNA ligase                       K01971     835     2059     0.413      840     
rle:pRL120229 putative DNA ligase family protein        K01971     881     2058     0.401      892     
bja:bll6773 ORF_ID:bll6773; probable DNA ligase         K01971     892     2051     0.394      905     
ret:RHE_PE00252 putative ATP-dependent DNA ligase prote K01971     882     2036     0.400      893     
rpa:TX73_018915 DNA ligase D                            K01971     914     2018     0.393      926     
sjp:SJA_C1-12900 ATP-dependent DNA ligase               K01971     829     2003     0.414      845     
swi:Swit_3982 DNA ligase D                              K01971     837     1962     0.408      830     
sml:Smlt0053 putative ATP-dependent DNA ligase          K01971     828     1958     0.391      856     
rsp:RSP_2679 ATP-dependent DNA ligase LigD polymerase m K01971     868     1950     0.395      864     
nar:Saro_1695 ATP-dependent DNA ligase LigD phosphoeste K01971     843     1915     0.409      834     
dsy:DSY0616 hypothetical protein                        K01971     818     1890     0.384      856     
cpy:Cphy_1729 DNA ligase D                              K01971     813     1876     0.370      847     
xac:XAC2414 ATP-dependent DNA ligase                    K01971     872     1811     0.378      870     
eba:ebA6655 ATP-dependent DNA ligase                    K01971     742     1810     0.397      867     
xcc:XCC2307 ATP-dependent DNA ligase                    K01971     849     1801     0.378      854     
scl:sce3523 unnamed protein product; High confidence in K01971     762     1721     0.420      686     
sur:STAUR_6997 ATP dependent DNA ligase                 K01971     836     1683     0.375      863     
phe:Phep_1702 DNA ligase D                              K01971     877     1655     0.359      847     
mab:MAB_1033 Putative ATP-dependent DNA ligase          K01971     750      974     0.383      530     
mmi:MMAR_4573 ATP dependent DNA ligase                  K01971     770      953     0.390      528     
mul:MUL_4434 ATP dependent DNA ligase                   K01971     770      942     0.388      528     
amd:AMED_3255 ATP-dependent DNA ligase                  K01971     670      935     0.330      663     
mva:Mvan_4915 ATP-dependent DNA ligase LigD ligase modu K01971     763      933     0.366      536     
mtu:Rv0938 multifunctional non-homologous end joining D K01971     759      915     0.371      529     
mtc:MT0965 conserved hypothetical protein/DNA ligase    K01971     759      914     0.371      529     
ccyc:SCMU_35490 ATP-dependent DNA ligase                K01971     899      899     0.354      559     
msm:MSMEG_5570 DNA ligase                               K01971     755      876     0.356      536     
gpo:GPOL_c05170 putative ATP-dependent DNA ligase       K01971     812      861     0.373      539     
nfa:NFA_6770 putative ATP-dependent DNA ligase          K01971     808      845     0.359      523     
rha:RHA1_ro05048 DNA ligase (ATP)                       K01971     766      831     0.352      528     
rer:RER_45220 ATP-dependent DNA ligase LigD             K01971     758      827     0.363      526     
sen:SACE_4181 ATP dependent DNA ligase                  K01971     647      768     0.274      843     
vg:22109413 Rhizobium phage vB_RleM_PPF1; non-homologou K01971     348      735     0.383      339     
pfl:PFL_6269 Hypothetical protein                       K01971     186      700     0.614      166     
pde:Pden_4186 conserved hypothetical protein            K01971     330      679     0.391      327     
sct:SCAT_5457 DNA polymerase LigD, ligase domain                   313      653     0.394      320     
det:DET0850 conserved hypothetical protein                         183      633     0.545      187     
bha:BH2209 BH2209; unknown conserved protein            K01971     611      555     0.257      641     
sgu:SGLAU_28045 hypothetical protein                               336      547     0.351      288     
sma:SAVERM_1696 putative DNA primase, small subunit                338      540     0.351      276     
stp:Strop_3968 ATP dependent DNA ligase                 K01971     312      538     0.376      314     
sco:SCO6709 conserved hypothetical protein                         341      538     0.338      293     
bsu:BSU13400 ATP-dependent DNA ligase YkoU              K01971     611      537     0.251      642     
ase:ACPL_7020 DNA ligase (ATP)                                     319      534     0.337      285     
kfl:Kfla_5287 DNA polymerase LigD, polymerase domain pr            335      527     0.330      303     
sgr:SGR_1023 conserved hypothetical protein                        345      515     0.331      299     
mma:MM_0209 hypothetical protein                                   152      500     0.503      155     
mac:MA_3428 conserved hypothetical protein                         156      495     0.497      161     
nca:Noca_2445 putative DNA ligase (ATP), C-terminal                326      494     0.344      285     
mba:Mbar_A2115 conserved hypothetical protein                      151      490     0.503      153     
oih:OB3034 hypothetical conserved protein               K01971     595      476     0.229      642     
chy:CHY_0025 conserved hypothetical protein             K01971     293      471     0.304      280     
mta:Moth_1488 ATP dependent DNA ligase, central                    320      456     0.324      327     
bpf:BpOF4_18445 ATP-dependent DNA ligase                K01971     578      451     0.260      554     
sro:Sros_6714 DNA primase small subunit                            334      449     0.296      270     
pjd:Pjdr2_4985 DNA polymerase LigD, polymerase domain p K01971     304      425     0.299      271     
afu:AF_1725 DNA ligase, putative                        K01971     313      421     0.331      317     
pfu:PF1635 DNA ligase (lig)                             K10747     561      392     0.294      343     
pab:PAB2002 lig DNA ligase                              K10747     559      392     0.290      341     
ton:TON_1515 thermostable DNA ligase                    K10747     562      384     0.293      382     
pho:PH1622 559aa long hypothetical DNA ligase           K10747     559      380     0.287      341     
ksk:KSE_05320 hypothetical protein                      K01971     173      375     0.409      176     
ag:CAC21199 DNA ligase (ATP or NAD+) (EC:6.5.1.6)       K10747     559      372     0.294      340     
tko:TK2140 ATP-dependent DNA ligase                     K10747     562      371     0.281      388     
hth:HTH_1466 DNA ligase                                            572      356     0.313      291     
tex:Teth514_0952 ATP dependent DNA ligase               K01971     307      332     0.272      309     
hvo:HVO_1565 DNA ligase (ATP)                           K10747     585      327     0.292      343     
ttm:Tthe_0704 ATP dependent DNA ligase                  K01971     307      324     0.278      317     
ecu:ECU02_1220 uncharacterized protein                  K10747     589      318     0.300      343     
pai:PAE0833 DNA ligase                                  K10747     584      318     0.299      311     
tac:Ta1148 DNA ligase related protein                   K10747     588      312     0.298      336     
yli:2908208 DNA ligase 1                                K10747     711      303     0.283      368     
cre:CHLRE_07g325716v5 uncharacterized protein           K10747     973      300     0.270      348     
cel:CELE_C29A12.3 DNA ligase 1                          K10747     773      299     0.272      382     
cne:CNI04170 DNA ligase, putative                       K10747     803      296     0.283      375     
mea:Mex_1p3448 putative ATP-dependent DNA ligase                   635      293     0.294      479     
nmr:Nmar_1037 DNA ligase I, ATP-dependent Dnl1          K10747     588      291     0.291      296     
aae:aq_1394 DNA ligase (ATP dependent)                             585      290     0.287      328     
ape:APE_1094.1 ADP-dependent DNA ligase                 K10747     602      284     0.299      294     
smo:SELMODRAFT_97073 hypothetical protein               K10747     638      283     0.293      307     
mse:Msed_0150 DNA ligase I, ATP-dependent Dnl1          K10747     598      283     0.277      357     
cal:CAALFM_C300830CA DNA ligase (ATP)                   K10747     770      283     0.285      323     
hma:rrnAC0463 DNA ligase                                K10747     554      282     0.304      296     
spo:2541849 ATP-dependent DNA replication ligase Cdc17  K10747     768      279     0.255      435     
tgo:TGME49_208580 DNA ligase 1, putative                K10747    1331      278     0.264      371     
sai:Saci_0788 thermostable DNA ligase                   K10747     598      278     0.276      312     
ath:AT1G08130 DNA ligase 1                              K10747     790      277     0.288      299     
mxa:MXAN_6074 DNA ligase, ATP-dependent                            531      276     0.280      372     
ccr:CC_3610 DNA ligase, ATP-dependent, putative                    541      276     0.317      309     
cit:102628869 DNA ligase 1                              K10747     806      272     0.261      375     
oas:101104173 DNA ligase 1 isoform X4                   K10747     958      271     0.291      337     
sot:102604298 DNA ligase 1-like                         K10747     802      271     0.262      451     
sly:101262281 DNA ligase 1                              K10747     802      271     0.264      451     
pif:PITG_04709 DNA ligase, putative                               3896      270     0.238      747     
rcu:8275235 DNA ligase 1                                K10747     796      269     0.280      325     
sto:STK_02230 DNA ligase                                K10747     600      269     0.258      364     
kla:KLLA0_D12496g uncharacterized protein               K10747     700      268     0.262      320     
nta:107828011 DNA ligase 1                              K10747     775      267     0.276      322     
bta:100124507 DNA ligase 1                              K10747     916      266     0.288      337     
rfq:117035168 LOW QUALITY PROTEIN: DNA ligase 1         K10747    1060      265     0.291      330     
xtr:549105 DNA ligase 3                                 K10776     893      265     0.258      361     
vvi:100266816 DNA ligase 6 isoform X1                             1449      264     0.240      379     
ppp:112290811 DNA ligase 1                              K10747     776      263     0.283      322     
pto:PTO0672 DNA ligase                                  K10747     590      262     0.252      313     
sce:YDL164C DNA ligase (ATP) CDC9                       K10747     755      261     0.268      325     
dre:563276 DNA ligase 3 isoform X1                      K10776    1011      261     0.243      506     
hal:VNG_0881G DNA ligase                                K10747     561      261     0.286      322     
ppa:PAS_chr3_1112 DNA ligase found in the nucleus and m K10747     744      260     0.268      332     
mcc:718528 DNA ligase 1 isoform X1                      K10747     919      260     0.288      330     
ptr:468936 DNA ligase 1 isoform X4                      K10747     919      259     0.288      330     
ptex:113441537 DNA ligase 3 isoform X1                  K10776     984      258     0.281      292     
cjc:100415094 DNA ligase 1 isoform X1                   K10747     919      258     0.277      328     
hsa:3978 DNA ligase 1 isoform 1                         K10747     919      258     0.288      330     
aga:1280180 DNA ligase 1 isoform X1                     K10747     899      258     0.279      330     
sso:SSO0189 DNA ligase (polydeoxyribonucleotide synthas K10747     601      257     0.261      348     
pmur:107288940 DNA ligase 3                             K10776     984      256     0.277      292     
cge:100767365 DNA ligase 1 isoform X2                   K10747     931      256     0.283      336     
spu:581252 DNA ligase 3                                 K10776    1049      256     0.245      425     
cpoc:100734013 DNA ligase 1                             K10747     919      255     0.282      330     
ecb:100053186 DNA ligase 1 isoform X1                   K10747     912      255     0.285      330     
gga:417530 DNA ligase 3                                 K10776    1008      255     0.254      370     
tva:5466150 DNA ligase 1/3 family member family                    679      254     0.256      317     
cfa:100686967 DNA ligase 1 isoform X1                   K10747     913      254     0.285      330     
ssc:100520434 DNA ligase 1                              K10747     923      254     0.285      330     
rno:81513 DNA ligase 1                                  K10747     913      253     0.277      336     
mdm:103413077 DNA ligase 1                              K10747     732      251     0.279      355     
dme:Dmel_CG5602 DNA ligase 1                                       747      250     0.278      302     
clv:102083602 DNA ligase 3                              K10776     994      249     0.276      290     
mth:MTH_1580 DNA ligase                                 K10747     561      249     0.277      372     
apla:101796914 DNA ligase 1 isoform X1                  K10747     775      248     0.270      348     
ola:101156760 DNA ligase 3                              K10776    1011      248     0.255      361     
mmg:MTBMA_c01660 ATP-dependent DNA ligase               K10747     551      248     0.276      333     
ocu:100340979 DNA ligase 1 isoform X1                   K10747     915      247     0.266      364     
mmu:16881 DNA ligase 1                                  K10747     916      247     0.274      292     
fca:101093313 DNA ligase 1 isoform X4                   K10747     912      246     0.285      330     
gmx:100783155 DNA ligase 1                              K10747     776      246     0.284      299     
ddi:DDB_G0274493 DNA ligase I                           K10747    1192      246     0.264      311     
mja:MJ_0171 DNA ligase (lig)                            K10747     573      246     0.254      347     
tgu:100220473 DNA ligase 3 isoform X1                   K10776     979      245     0.249      390     
xla:398275 ligase III, DNA, ATP-dependent L homeolog    K10776     988      245     0.244      360     
mdo:100616962 DNA ligase 1-like                                    632      244     0.267      307     
aor:AO090011000796 unnamed protein product; ATP-depende K10747     882      242     0.262      320     
dne:112987312 DNA ligase 3                              K10776     992      241     0.269      290     
sshi:J5U23_00068 DNA ligase (ATP, ADP or GTP)           K10747     601      240     0.257      323     
lma:LMJF_30_3440 putative DNA ligase I                  K10747     681      240     0.257      334     
tps:THAPSDRAFT_268404 ligase                            K10747     633      239     0.272      331     
zma:103651343 DNA ligase 6                                        1397      238     0.250      392     
amj:102572799 DNA ligase 3                              K10776     906      236     0.237      384     
ame:408752 DNA ligase 1 isoform X1                      K10747     964      236     0.240      338     
cin:100170070 DNA ligase 3                              K10776     854      235     0.270      289     
tca:658633 DNA ligase                                   K10747     756      235     0.256      352     
ncr:NCU06481 DNA ligase                                 K10747     923      235     0.264      273     
mtr:25492370 DNA ligase 1                               K10747     777      233     0.261      330     
aag:23687986 DNA ligase 1 isoform X2                    K10747     905      233     0.259      332     
afm:AFUA_2G09010 DNA ligase Cdc9                        K10747     909      233     0.264      292     
mgr:MGG_06370 DNA ligase 1                              K10747     896      232     0.259      320     
fgr:FGSG_05453 DNA ligase                               K10747     867      231     0.271      277     
ani:ANIA_06069 hypothetical protein                     K10747     932      230     0.260      285     
fvr:FVEG_07075 DNA ligase 1                             K10747     916      228     0.266      274     
pti:PHATR_51005 hypothetical protein                    K10747     651      228     0.280      300     
uma:UMAG_11196 putative DNA ligase I                    K10747     851      228     0.265      358     
csv:101213447 DNA ligase 1                              K10747     801      226     0.270      437     
osa:4348965 DNA ligase 1 isoform X1                     K10747     916      226     0.258      322     
xom:XOO1771 DNA ligase                                             534      226     0.271      329     
ehi:EHI_111060 DNA ligase                               K10747     685      225     0.267      288     
vfi:VF_1450 DNA ligase                                  K26441     285      225     0.272      305     
tru:101068311 DNA ligase 3                              K10776     998      223     0.259      290     
tbr:Tb927.6.4780 DNA ligase I, putative                 K10747     699      223     0.251      350     
son:SO_2204 DNA ligase ATP-dependent                    K26441     311      216     0.303      238     
tcr:506835.120 DNA ligase I                             K10747     701      211     0.236      382     
maj:MAA_03560 DNA ligase (Polydeoxyribonucleotide synth K10747     898      209     0.255      274     
bmor:101739679 DNA ligase 3                             K10776     998      208     0.252      290     
tre:TRIREDRAFT_22881 DNA ligase                         K10747     877      204     0.253      269     
nve:5510104 DNA ligase 1                                K10747     959      198     0.235      349     
pfa:PF3D7_1304100 DNA ligase I                          K10747     912      195     0.271      328     
mmp:MMP0970 ATP-dependent DNA ligase                    K10747     573      187     0.235      340     
vpa:VP1477 DNA ligase                                   K26441     280      185     0.292      253     
alv:Alvin_0262 ATP dependent DNA ligase                 K26441     320      178     0.295      258     
vvu:VV1_2657 ATP-dependent DNA ligase                   K26441     280      176     0.280      296     
gla:GL50803_007649 DNA ligase (ATP)                                810      171     0.252      317     
sty:HCM2.0035c putative DNA ligase                                 440      168     0.286      227     
ypk:Y1095.pl unknown                                               365      167     0.286      227     
abo:ABO_2702 DNA ligase (ATP)                           K26441     283      165     0.270      285     
smm:Smp_019840.1 DNA ligase I, putative                            783      164     0.241      278     
zga:ZOBELLIA_2113 DNA ligase                                       554      156     0.228      307     
vch:VC_1542 DNA ligase                                  K26441     282      152     0.275      204     
ctt:CtCNB1_1783 ATP dependent DNA ligase                K26441     279      143     0.272      232     
nme:NMB2048 DNA ligase                                  K26441     274      141     0.268      235     
ngo:NGO_2034 DNA ligase                                 K26441     274      140     0.268      235     
npu:Npun_BR036 GUN4-like protein                                   876      136     0.255      274     
dds:Ddes_1238 Respiratory-chain NADH dehydrogenase doma K03615     439      130     0.264      208     
ser:SERP1534 DNA ligase, ATP-dependent                             432      125     0.234      188     
hin:HI_1182 predicted coding region HI1182              K26441     185      123     0.276      181     
lil:LA_0984 ATP-dependent DNA ligase                    K01971     501      121     0.270      185     
cje:Cj1669c ATP-dependent DNA ligase                    K26441     282      119     0.270      200     
pma:Pro_0070 Uncharacterized conserved protein                     126      118     0.261      111     
pdi:BDI_2118 putative ribose 5-phosphate isomerase      K01807     234      117     0.268      183     

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