| Motif id | From | To | Definition | E value | Score |
| pf:AcylCoA_DH_N | 5 | 34 | Acyl-CoA dehydrogenase N terminal
| 1.3e-08 | - |
| pf:Acyl-CoA_dh_N | 39 | 157 | Acyl-CoA dehydrogenase, N-terminal domain
| 5.4e-07 | - |
| pf:Acyl-CoA_dh_M | 162 | 269 | Acyl-CoA dehydrogenase, middle domain
| 1.8e-11 | - |
| pf:Acyl-CoA_dh_1 | 285 | 452 | Acyl-CoA dehydrogenase, C-terminal domain
| 2e-16 | - |
| pf:Acyl-CoA_dh_2 | 371 | 445 | Acyl-CoA dehydrogenase, C-terminal domain
| 0.0026 | - |
| pf:DUF2066 | 462 | 499 | Uncharacterized protein conserved in bacteria (DUF2066)
| 0.17 | - |
| pf:Acyl-CoA_dh_C | 475 | 592 | Acetyl-CoA dehydrogenase C-terminal like
| 1e-21 | - |