| Motif id | From | To | Definition | E value | Score |
| pf:Rv0461 | 29 | 80 | | 0.16 | - |
| pf:PG_binding_4 | 120 | 227 | Putative peptidoglycan binding domain
| 0.039 | - |
| pf:RNR_N | 290 | 318 | Ribonucleotide reductase N-terminal
| 0.81 | - |
| pf:YkuD | 389 | 513 | L,D-transpeptidase catalytic domain
| 3.2e-26 | - |