SSDB Motif Search Result


Organism : Bacillus subtilis subsp. subtilis 168
Gene : BSU34200
Definition : K03092 RNA polymerase sigma-54 factor | (RefSeq) sigL; RNA polymerase sigma-54 factor
Motif idFromToDefinitionE valueScore
pf:Sigma54_AID448Sigma-54 factor, Activator interacting domain (AID) 2.8e-12-
pf:DUF16316146Protein of unknown function (DUF1631) 0.011-
pf:DUF142569140Protein of unknown function (DUF1425) 0.13-
pf:DUF604272153 0.64-
pf:Sigma54_CBD77261Sigma-54 factor, core binding domain 1.4e-49-
pf:Sigma54_DBD275434Sigma-54, DNA binding domain 5.2e-66-
pf:HTH_IclR319342IclR helix-turn-helix domain 0.3-
pf:Sigma70_r4321343Sigma-70, region 4 0.62-
pf:HTH_Crp_2321344Crp-like helix-turn-helix domain 0.92-
pf:HTH_17323348Helix-turn-helix domain 0.17-
pf:HTH_38323344Helix-turn-helix domain 0.38-
pf:HTH_23324344Homeodomain-like domain 0.67-

bsu:BSU34200 pf:Sigma54_AID pf:DUF1631 pf:DUF1425 pf:DUF6042 pf:Sigma54_CBD pf:Sigma54_DBD pf:HTH_IclR pf:Sigma70_r4 pf:HTH_Crp_2 pf:HTH_17 pf:HTH_38 pf:HTH_23


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