| Motif id | From | To | Definition | E value | Score |
| pf:RlmM_FDX | 1 | 71 | | 8.7e-31 | - |
| pf:Spt5-NGN | 8 | 61 | Early transcription elongation factor of RNA pol II, NGN section
| 0.015 | - |
| pf:RLMM_N | 84 | 164 | | 1.3e-37 | - |
| pf:FtsJ | 186 | 280 | FtsJ-like methyltransferase
| 8.1e-10 | - |
| pf:MIT_C | 311 | 347 | Phospholipase D-like domain at C-terminus of MIT
| 0.04 | - |