| Motif id | From | To | Definition | E value | Score |
| pf:UvrD-helicase | 20 | 346 | UvrD/REP helicase N-terminal domain
| 1.6e-49 | - |
| pf:AAA_19 | 28 | 330 | AAA domain
| 1.1e-16 | - |
| pf:AAA_30 | 34 | 83 | AAA domain
| 0.039 | - |
| pf:UvrD_C | 444 | 526 | UvrD-like helicase C-terminal domain
| 4.1e-06 | - |
| pf:UvrD_C | 669 | 797 | UvrD-like helicase C-terminal domain
| 1e-18 | - |
| pf:UvrD_C_2 | 691 | 708 | UvrD-like helicase C-terminal domain
| 0.008 | - |
| pf:UvrD_C_2 | 773 | 796 | UvrD-like helicase C-terminal domain
| 0.0048 | - |
| pf:PDDEXK_1 | 930 | 1101 | PD-(D/E)XK nuclease superfamily
| 1.8e-14 | - |