SSDB Motif Search Result


Organism : Pseudomonas chlororaphis subsp. aurantiaca
Gene : JM49_15955
Definition : K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | (GenBank) ligD; ATP-dependent DNA ligase
Motif idFromToDefinitionE valueScore
pf:LigD_N38142DNA polymerase Ligase (LigD) 5.4e-38-
pf:DNA_ligase_A_M218399ATP dependent DNA ligase domain 1.7e-25-
pf:DNA_ligase_A_C418512ATP dependent DNA ligase C terminal region 4.9e-24-
pf:DNA_primase_S669755DNA primase small subunit 0.00049-
pf:Peptidase_M29672748Thermophilic metalloprotease (M29) 0.18-

pcp:JM49_15955 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:DNA_primase_S pf:Peptidase_M29


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