SSDB Motif Search Result
Organism :
Pseudomonas chlororaphis PCL1606
Gene :
PCL1606_31290
Definition :
K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | (GenBank) ATP-dependent DNA ligase
Motif id
From
To
Definition
E value
Score
pf:LigD_N
40
145
DNA polymerase Ligase (LigD)
1.7e-42
-
pf:DNA_ligase_A_M
247
426
ATP dependent DNA ligase domain
4.1e-23
-
pf:DNA_ligase_A_C
445
539
ATP dependent DNA ligase C terminal region
4.6e-30
-
pf:LigD_Prim-Pol
594
847
9e-89
-
pf:DNA_primase_S
697
816
DNA primase small subunit
2.6e-07
-
[
GENES
|
KEGG2
|
KEGG
|
GenomeNet
]