SSDB Motif Search Result


Organism : Pasteurella multocida subsp. multocida 3480
Gene : NT08PM_0789
Definition : K03581 exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] | (GenBank) exodeoxyribonuclease V, alpha subunit
Motif idFromToDefinitionE valueScore
pf:RecD_N8126 0.0011-
pf:AAA_29171206P-loop containing region of AAA domain 0.034-
pf:T2SSE173215Type II/IV secretion system protein 0.042-
pf:AAA_19179333AAA domain 4.8e-34-
pf:AAA_30179357AAA domain 9e-26-
pf:AAA_11179240AAA domain 4.3e-06-
pf:PhoH179333PhoH-like protein 0.14-
pf:DEAD179301DEAD/DEAH box helicase 0.2-
pf:AAA_7180246P-loop containing dynein motor region D3 0.019-
pf:UvrD-helicase181256UvrD/REP helicase N-terminal domain 9.2e-06-
pf:TrwB_AAD_bind181214Type IV secretion-system coupling protein DNA-binding domain 0.17-
pf:nSTAND3182214 0.00068-
pf:FtsK_SpoIIIE185229FtsK/SpoIIIE family 0.034-
pf:ResIII188300Type III restriction enzyme, res subunit 0.44-
pf:AAA_22189327AAA domain 1.6e-07-
pf:AAA_16190300AAA ATPase domain 0.0013-
pf:SLFN-g3_helicase191302 2.1e-05-
pf:AAA_28192209AAA domain 0.028-
pf:NACHT192224NACHT domain 0.41-
pf:AAA_24192222AAA domain 0.58-
pf:AAA_33193261AAA domain 0.0065-
pf:NTPase_1193219NTPase 0.071-
pf:DO-GTPase1193224 0.076-
pf:AAA193223ATPase family associated with various cellular activities (AAA) 0.2-
pf:AAA_5193214AAA domain (dynein-related subfamily) 0.85-
pf:Helicase_RecD194314Helicase 2.7e-10-
pf:AAA_11292333AAA domain 0.0063-
pf:Viral_helicase1292360Viral (Superfamily 1) RNA helicase 0.63-

pul:NT08PM_0789 pf:RecD_N pf:AAA_29 pf:T2SSE pf:AAA_19 pf:AAA_30 pf:AAA_11 pf:PhoH pf:DEAD pf:AAA_7 pf:UvrD-helicase pf:TrwB_AAD_bind pf:nSTAND3 pf:FtsK_SpoIIIE pf:ResIII pf:AAA_22 pf:AAA_16 pf:SLFN-g3_helicase pf:AAA_28 pf:NACHT pf:AAA_24 pf:AAA_33 pf:NTPase_1 pf:DO-GTPase1 pf:AAA pf:AAA_5 pf:Helicase_RecD pf:AAA_11 pf:Viral_helicase1


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