SSDB Motif Search Result
Organism :
Pasteurella multocida subsp. multocida 3480
Gene :
NT08PM_0789
Definition :
K03581 exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] | (GenBank) exodeoxyribonuclease V, alpha subunit
Motif id
From
To
Definition
E value
Score
pf:RecD_N
8
126
0.0011
-
pf:AAA_29
171
206
P-loop containing region of AAA domain
0.034
-
pf:T2SSE
173
215
Type II/IV secretion system protein
0.042
-
pf:AAA_19
179
333
AAA domain
4.8e-34
-
pf:AAA_30
179
357
AAA domain
9e-26
-
pf:AAA_11
179
240
AAA domain
4.3e-06
-
pf:PhoH
179
333
PhoH-like protein
0.14
-
pf:DEAD
179
301
DEAD/DEAH box helicase
0.2
-
pf:AAA_7
180
246
P-loop containing dynein motor region D3
0.019
-
pf:UvrD-helicase
181
256
UvrD/REP helicase N-terminal domain
9.2e-06
-
pf:TrwB_AAD_bind
181
214
Type IV secretion-system coupling protein DNA-binding domain
0.17
-
pf:nSTAND3
182
214
0.00068
-
pf:FtsK_SpoIIIE
185
229
FtsK/SpoIIIE family
0.034
-
pf:ResIII
188
300
Type III restriction enzyme, res subunit
0.44
-
pf:AAA_22
189
327
AAA domain
1.6e-07
-
pf:AAA_16
190
300
AAA ATPase domain
0.0013
-
pf:SLFN-g3_helicase
191
302
2.1e-05
-
pf:AAA_28
192
209
AAA domain
0.028
-
pf:NACHT
192
224
NACHT domain
0.41
-
pf:AAA_24
192
222
AAA domain
0.58
-
pf:AAA_33
193
261
AAA domain
0.0065
-
pf:NTPase_1
193
219
NTPase
0.071
-
pf:DO-GTPase1
193
224
0.076
-
pf:AAA
193
223
ATPase family associated with various cellular activities (AAA)
0.2
-
pf:AAA_5
193
214
AAA domain (dynein-related subfamily)
0.85
-
pf:Helicase_RecD
194
314
Helicase
2.7e-10
-
pf:AAA_11
292
333
AAA domain
0.0063
-
pf:Viral_helicase1
292
360
Viral (Superfamily 1) RNA helicase
0.63
-
[
GENES
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KEGG2
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KEGG
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GenomeNet
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