| Motif id | From | To | Definition | E value | Score |
| pf:AAA_25 | 38 | 158 | AAA domain
| 0.3 | - |
| pf:ABC_tran | 42 | 201 | ABC transporter
| 3.3e-31 | - |
| pf:nSTAND1 | 44 | 79 | | 0.55 | - |
| pf:AAA_29 | 47 | 79 | P-loop containing region of AAA domain
| 0.12 | - |
| pf:AAA_22 | 54 | 229 | AAA domain
| 0.73 | - |
| pf:SMC_N | 55 | 245 | RecF/RecN/SMC N terminal domain
| 0.0013 | - |
| pf:AAA_21 | 156 | 236 | AAA domain, putative AbiEii toxin, Type IV TA system
| 2e-07 | - |
| pf:ABC_ATPase | 174 | 253 | Predicted ATPase of the ABC class
| 0.032 | - |
| pf:TniB | 183 | 236 | Bacterial TniB protein
| 0.016 | - |
| pf:oligo_HPY | 252 | 284 | Oligopeptide/dipeptide transporter, C-terminal region
| 1.3e-05 | - |
| pf:Sigma54_activat | 313 | 351 | Sigma-54 interaction domain
| 0.98 | - |
| pf:nSTAND1 | 316 | 357 | | 0.053 | - |
| pf:RsgA_GTPase | 320 | 352 | | 0.044 | - |
| pf:ABC_tran | 321 | 470 | ABC transporter
| 1.2e-31 | - |
| pf:AAA_23 | 322 | 350 | AAA domain
| 0.17 | - |
| pf:AAA_29 | 323 | 353 | P-loop containing region of AAA domain
| 0.0035 | - |
| pf:AAA_16 | 326 | 353 | AAA ATPase domain
| 0.24 | - |
| pf:AAA_25 | 327 | 348 | AAA domain
| 0.32 | - |
| pf:SMC_N | 332 | 516 | RecF/RecN/SMC N terminal domain
| 0.00067 | - |
| pf:AAA_22 | 333 | 364 | AAA domain
| 0.096 | - |
| pf:Mg_chelatase | 333 | 357 | Magnesium chelatase, subunit ChlI
| 0.26 | - |
| pf:DUF815 | 333 | 372 | Protein of unknown function (DUF815)
| 0.69 | - |
| pf:PRK | 334 | 366 | Phosphoribulokinase / Uridine kinase family
| 0.52 | - |
| pf:AAA_5 | 334 | 353 | AAA domain (dynein-related subfamily)
| 0.91 | - |
| pf:AAA | 335 | 352 | ATPase family associated with various cellular activities (AAA)
| 0.81 | - |
| pf:oligo_HPY | 522 | 569 | Oligopeptide/dipeptide transporter, C-terminal region
| 3.6e-09 | - |