SSDB Motif Search Result


Organism : Streptomyces gilvosporeus
Gene : B1H19_15535
Definition : K03581 exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] | (GenBank) helicase
Motif idFromToDefinitionE valueScore
pf:HHH_594138Helix-hairpin-helix domain 1.1e-06-
pf:HHH_496139Helix-hairpin-helix containing domain 0.0018-
pf:HHH_4144234Helix-hairpin-helix containing domain 4.7e-34-
pf:AAA_30335513AAA domain 7.5e-42-
pf:UvrD-helicase336395UvrD/REP helicase N-terminal domain 0.36-
pf:AAA_11337395AAA domain 0.00066-
pf:PhoH337404PhoH-like protein 0.11-
pf:DEAD337474DEAD/DEAH box helicase 0.16-
pf:AAA_19339468AAA domain 8.1e-43-
pf:nSTAND3340381 0.085-
pf:AAA_22348446AAA domain 8.4e-05-
pf:PIF1348445PIF1-like helicase 0.0088-
pf:TrwB_AAD_bind349388Type IV secretion-system coupling protein DNA-binding domain 0.28-
pf:AAA_16350480AAA ATPase domain 0.0098-
pf:SLFN-g3_helicase350435 0.39-
pf:Viral_helicase1353467Viral (Superfamily 1) RNA helicase 0.015-
pf:Helicase_RecD353448Helicase 0.0057-
pf:AAA353382ATPase family associated with various cellular activities (AAA) 0.21-
pf:HTH_IclR389408IclR helix-turn-helix domain 0.46-
pf:AAA_11425467AAA domain 0.3-
pf:SH3_13572637 7e-18-
pf:Viral_helicase1654704Viral (Superfamily 1) RNA helicase 0.00083-
pf:UvrD_C_2657705UvrD-like helicase C-terminal domain 3e-20-
pf:UvrD_C661704UvrD-like helicase C-terminal domain 0.56-

sgv:B1H19_15535 pf:HHH_5 pf:HHH_4 pf:HHH_4 pf:AAA_30 pf:UvrD-helicase pf:AAA_11 pf:PhoH pf:DEAD pf:AAA_19 pf:nSTAND3 pf:AAA_22 pf:PIF1 pf:TrwB_AAD_bind pf:AAA_16 pf:SLFN-g3_helicase pf:Viral_helicase1 pf:Helicase_RecD pf:AAA pf:HTH_IclR pf:AAA_11 pf:SH3_13 pf:Viral_helicase1 pf:UvrD_C_2 pf:UvrD_C

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