SSDB Motif Search Result
Organism :
Variovorax paradoxus EPS
Gene :
Varpa_0679
Definition :
K13924 two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] | (GenBank) signal transduction histidine kinase with CheB and CheR activity
Motif id
From
To
Definition
E value
Score
pf:CheB_methylest
18
193
CheB methylesterase
5.4e-52
-
pf:CheR_N
230
281
CheR methyltransferase, all-alpha domain
1.6e-13
-
pf:CheR
295
483
CheR methyltransferase, SAM binding domain
1.3e-54
-
pf:Methyltransf_23
332
472
Methyltransferase domain
0.028
-
pf:ATG14
646
736
0.24
-
pf:Golgin_A5
665
756
Golgin subfamily A member 5
0.13
-
pf:ATG16
666
753
Autophagy protein 16 (ATG16)
0.56
-
pf:Sec20
667
727
Sec20
0.016
-
pf:Sec8_N
683
731
0.14
-
pf:Fusion_gly
689
732
Fusion glycoprotein F0
0.63
-
pf:PAS_10
749
853
PAS domain
1.2e-23
-
pf:PAS_4
756
857
PAS fold
0.0013
-
pf:PAS_9
774
855
PAS domain
0.49
-
pf:PAS_8
868
915
PAS domain
0.0011
-
pf:PAS
880
964
PAS fold
2e-08
-
pf:PAS_4
880
983
PAS fold
0.00015
-
pf:PAS_9
881
980
PAS domain
1.8e-09
-
pf:PAS_3
892
925
PAS fold
0.14
-
pf:HisKA
1010
1077
His Kinase A (phospho-acceptor) domain
2.4e-14
-
pf:HATPase_c
1122
1232
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
2.9e-25
-
pf:Response_reg
1256
1367
Response regulator receiver domain
8.2e-21
-
[
GENES
|
KEGG2
|
KEGG
|
GenomeNet
]