| Entry | SW_score | bits | identity | overlap |
| rpu:CDC45_01260 | 595 | 141.4 | 0.357 | 283 |
| rpu:CDC45_01375 | 237 | 59.8 | 0.280 | 189 |
| rpu:CDC45_01565 | 235 | 59.4 | 0.263 | 194 |
| rpu:CDC45_02430 | 363 | 88.5 | 0.291 | 358 |
| rpu:CDC45_02440 | 198 | 50.9 | 0.251 | 167 |
| rpu:CDC45_06685 | 259 | 64.8 | 0.274 | 230 |
| rpu:CDC45_09065 | 1107 | 258.1 | 0.321 | 733 |
| rpu:CDC45_10295 | 472 | 113.4 | 0.295 | 295 |
| rpu:CDC45_10300 | 275 | 68.5 | 0.254 | 209 |
| rpu:CDC45_14640 | 374 | 91.0 | 0.356 | 188 |
| rpu:CDC45_14645 | 249 | 62.6 | 0.262 | 172 |
| rpu:CDC45_17760 | 296 | 73.3 | 0.300 | 190 |
| rpu:CDC45_18740 | 233 | 58.9 | 0.242 | 281 |
| rpu:CDC45_20850 | 203 | 52.1 | 0.261 | 207 |
| rpu:CDC45_20855 | 321 | 79.0 | 0.350 | 183 |
| rpu:CDC45_20975 | 291 | 72.1 | 0.302 | 222 |