| Entry | SW_score | bits | identity | overlap |
| shx:MS3_00005878 | 513 | 122.7 | 0.288 | 386 |
| shx:MS3_00009829 | 482 | 115.7 | 0.290 | 393 |
| shx:MS3_00001626 | 432 | 104.3 | 0.338 | 240 |
| shx:MS3_00004805 | 421 | 101.8 | 0.376 | 189 |
| shx:MS3_00007790 | 412 | 99.7 | 0.267 | 464 |
| shx:MS3_00006665 | 410 | 99.3 | 0.345 | 200 |
| shx:MS3_00005378 | 406 | 98.3 | 0.378 | 188 |
| shx:MS3_00009456 | 400 | 97.0 | 0.376 | 194 |
| shx:MS3_00010950 | 340 | 83.3 | 0.319 | 191 |
| shx:MS3_00007623 | 339 | 83.1 | 0.320 | 203 |
| shx:MS3_00007619 | 311 | 76.7 | 0.323 | 192 |
| shx:MS3_00007621 | 305 | 75.3 | 0.406 | 138 |
| shx:MS3_00010398 | 304 | 75.1 | 0.236 | 335 |
| shx:MS3_00007615 | 288 | 71.4 | 0.304 | 207 |
| shx:MS3_00007315 | 286 | 71.0 | 0.290 | 207 |
| shx:MS3_00007620 | 262 | 65.5 | 0.284 | 169 |
| shx:MS3_00003562 | 260 | 65.1 | 0.249 | 321 |
| shx:MS3_00005805 | 259 | 64.8 | 0.283 | 120 |
| shx:MS3_00005539 | 256 | 64.1 | 0.268 | 257 |
| shx:MS3_00007782 | 247 | 62.1 | 0.231 | 346 |
| shx:MS3_00001517 | 241 | 60.7 | 0.225 | 440 |
| shx:MS3_00005126 | 236 | 59.6 | 0.261 | 357 |
| shx:MS3_00009840 | 235 | 59.4 | 0.251 | 339 |
| shx:MS3_00003342 | 229 | 58.0 | 0.209 | 359 |
| shx:MS3_00004199 | 211 | 53.9 | 0.247 | 186 |
| shx:MS3_00010466 | 211 | 53.9 | 0.231 | 337 |
| shx:MS3_00002977 | 206 | 52.8 | 0.351 | 134 |
| shx:MS3_00007252 | 205 | 52.5 | 0.220 | 359 |
| shx:MS3_00003071 | 190 | 49.1 | 0.250 | 472 |
| shx:MS3_00006885 | 175 | 45.7 | 0.291 | 151 |
| shx:MS3_00002151 | 174 | 45.5 | 0.277 | 130 |
| shx:MS3_00008735 | 170 | 44.5 | 0.292 | 113 |
| shx:MS3_00005730 | 159 | 42.0 | 0.276 | 98 |
| shx:MS3_00004445 | 121 | 33.4 | 0.312 | 141 |