| Entry | SW_score | bits | identity | overlap |
| cyc:PCC7424_0926 | 379 | 92.2 | 0.257 | 576 |
| cyc:PCC7424_1164 | 279 | 69.4 | 0.236 | 423 |
| cyc:PCC7424_0775 | 275 | 68.5 | 0.247 | 433 |
| cyc:PCC7424_3518 | 251 | 63.0 | 0.237 | 486 |
| cyc:PCC7424_4151 | 249 | 62.6 | 0.236 | 488 |
| cyc:PCC7424_4392 | 234 | 59.1 | 0.235 | 324 |
| cyc:PCC7424_2744 | 231 | 58.5 | 0.228 | 464 |
| cyc:PCC7424_3579 | 221 | 56.2 | 0.236 | 381 |
| cyc:PCC7424_0010 | 215 | 54.8 | 0.270 | 408 |
| cyc:PCC7424_2093 | 211 | 53.9 | 0.232 | 388 |
| cyc:PCC7424_2892 | 171 | 44.8 | 0.252 | 286 |
| cyc:PCC7424_5475 | 157 | 41.6 | 0.253 | 241 |
| cyc:PCC7424_5039 | 112 | 31.3 | 0.339 | 112 |
| cyc:PCC7424_2622 | 111 | 31.1 | 0.317 | 104 |
| cyc:PCC7424_0868 | 106 | 30.0 | 0.311 | 106 |
| cyc:PCC7424_1780 | 105 | 29.7 | 0.342 | 79 |
| cyc:PCC7424_0362 | 102 | 29.0 | 0.323 | 96 |