| Entry | SW_score | bits | identity | overlap |
| rpu:CDC45_18850 | 2109 | 486.5 | 0.603 | 527 |
| rpu:CDC45_11930 | 543 | 129.6 | 0.344 | 320 |
| rpu:CDC45_05845 | 271 | 67.6 | 0.260 | 327 |
| rpu:CDC45_00070 | 238 | 60.0 | 0.263 | 353 |
| rpu:CDC45_08255 | 208 | 53.2 | 0.249 | 382 |
| rpu:CDC45_24575 | 205 | 52.5 | 0.252 | 314 |
| rpu:CDC45_15115 | 195 | 50.2 | 0.261 | 349 |
| rpu:CDC45_23760 | 178 | 46.4 | 0.288 | 233 |
| rpu:CDC45_23750 | 165 | 43.4 | 0.274 | 299 |
| rpu:CDC45_05655 | 152 | 40.4 | 0.252 | 377 |
| rpu:CDC45_16680 | 126 | 34.5 | 0.329 | 140 |
| rpu:CDC45_17020 | 108 | 30.4 | 0.313 | 99 |
| rpu:CDC45_24830 | 102 | 29.0 | 0.367 | 49 |
| rpu:CDC45_03985 | 102 | 29.0 | 0.302 | 106 |