| Entry | SW_score | bits | identity | overlap |
| pol:Bpro_0387 | 993 | 232.1 | 0.644 | 222 |
| pol:Bpro_5179 | 888 | 208.2 | 0.581 | 222 |
| pol:Bpro_5178 | 530 | 126.6 | 0.409 | 230 |
| pol:Bpro_1375 | 521 | 124.6 | 0.394 | 213 |
| pol:Bpro_2962 | 491 | 117.7 | 0.419 | 210 |
| pol:Bpro_5174 | 463 | 111.3 | 0.394 | 208 |
| pol:Bpro_4773 | 301 | 74.4 | 0.302 | 189 |
| pol:Bpro_0645 | 249 | 62.6 | 0.275 | 193 |
| pol:Bpro_2015 | 232 | 58.7 | 0.257 | 222 |
| pol:Bpro_0243 | 227 | 57.5 | 0.270 | 215 |
| pol:Bpro_4241 | 203 | 52.1 | 0.277 | 191 |
| pol:Bpro_0079 | 200 | 51.4 | 0.268 | 198 |
| pol:Bpro_4165 | 178 | 46.4 | 0.268 | 190 |
| pol:Bpro_3912 | 173 | 45.2 | 0.378 | 111 |
| pol:Bpro_4176 | 170 | 44.5 | 0.261 | 199 |
| pol:Bpro_2363 | 108 | 30.4 | 0.310 | 116 |