| Entry | SW_score | bits | identity | overlap |
| rpu:CDC45_07215 | 675 | 159.7 | 0.383 | 420 |
| rpu:CDC45_06640 | 213 | 54.3 | 0.256 | 266 |
| rpu:CDC45_05315 | 191 | 49.3 | 0.273 | 249 |
| rpu:CDC45_04885 | 181 | 47.1 | 0.293 | 239 |
| rpu:CDC45_08370 | 165 | 43.4 | 0.295 | 146 |
| rpu:CDC45_08360 | 129 | 35.2 | 0.322 | 118 |
| rpu:CDC45_04195 | 118 | 32.7 | 0.343 | 102 |
| rpu:CDC45_04330 | 104 | 29.5 | 0.324 | 71 |
| rpu:CDC45_11280 | 104 | 29.5 | 0.318 | 129 |