| Entry | SW_score | bits | identity | overlap |
| strn:SNAG_1008 | 666 | 157.6 | 0.358 | 302 |
| strn:SNAG_0187 | 543 | 129.6 | 0.350 | 294 |
| strn:SNAG_1396 | 436 | 105.2 | 0.306 | 291 |
| strn:SNAG_0400 | 408 | 98.8 | 0.316 | 212 |
| strn:SNAG_1752 | 400 | 97.0 | 0.295 | 302 |
| strn:SNAG_0346 | 393 | 95.4 | 0.288 | 278 |
| strn:SNAG_1882 | 374 | 91.0 | 0.287 | 244 |
| strn:SNAG_1633 | 370 | 90.1 | 0.278 | 299 |
| strn:SNAG_1117 | 368 | 89.7 | 0.330 | 209 |
| strn:SNAG_0461 | 359 | 87.6 | 0.300 | 220 |
| strn:SNAG_1447 | 354 | 86.5 | 0.289 | 225 |
| strn:SNAG_0523 | 353 | 86.3 | 0.302 | 235 |
| strn:SNAG_0844 | 349 | 85.3 | 0.292 | 274 |
| strn:SNAG_1344 | 348 | 85.1 | 0.297 | 219 |
| strn:SNAG_1305 | 346 | 84.7 | 0.290 | 231 |
| strn:SNAG_1476 | 344 | 84.2 | 0.310 | 213 |
| strn:SNAG_0794 | 343 | 84.0 | 0.307 | 212 |
| strn:SNAG_0701 | 339 | 83.1 | 0.257 | 230 |
| strn:SNAG_0337 | 338 | 82.8 | 0.298 | 215 |
| strn:SNAG_1333 | 337 | 82.6 | 0.279 | 219 |
| strn:SNAG_1881 | 325 | 79.9 | 0.298 | 205 |
| strn:SNAG_0925 | 324 | 79.7 | 0.243 | 230 |
| strn:SNAG_1348 | 321 | 79.0 | 0.271 | 255 |
| strn:SNAG_1347 | 314 | 77.4 | 0.293 | 215 |
| strn:SNAG_1771 | 310 | 76.5 | 0.316 | 209 |
| strn:SNAG_1676 | 309 | 76.2 | 0.285 | 221 |
| strn:SNAG_1192 | 308 | 76.0 | 0.281 | 224 |
| strn:SNAG_1620 | 307 | 75.8 | 0.285 | 242 |
| strn:SNAG_1402 | 296 | 73.3 | 0.301 | 219 |
| strn:SNAG_0095 | 295 | 73.0 | 0.310 | 232 |
| strn:SNAG_1162 | 293 | 72.6 | 0.260 | 254 |
| strn:SNAG_0693 | 288 | 71.4 | 0.259 | 232 |
| strn:SNAG_0477 | 284 | 70.5 | 0.268 | 239 |
| strn:SNAG_0833 | 283 | 70.3 | 0.269 | 223 |
| strn:SNAG_1468 | 282 | 70.1 | 0.246 | 232 |
| strn:SNAG_0788 | 274 | 68.3 | 0.238 | 235 |
| strn:SNAG_1133 | 265 | 66.2 | 0.233 | 245 |
| strn:SNAG_0603 | 262 | 65.5 | 0.267 | 243 |
| strn:SNAG_0336 | 261 | 65.3 | 0.275 | 240 |
| strn:SNAG_0692 | 258 | 64.6 | 0.267 | 221 |
| strn:SNAG_0476 | 256 | 64.1 | 0.254 | 228 |
| strn:SNAG_1848 | 251 | 63.0 | 0.252 | 214 |
| strn:SNAG_1645 | 248 | 62.3 | 0.293 | 215 |
| strn:SNAG_0258 | 245 | 61.6 | 0.240 | 225 |
| strn:SNAG_0860 | 245 | 61.6 | 0.233 | 227 |
| strn:SNAG_0732 | 243 | 61.2 | 0.266 | 241 |
| strn:SNAG_0810 | 242 | 61.0 | 0.299 | 234 |
| strn:SNAG_1809 | 238 | 60.0 | 0.257 | 191 |
| strn:SNAG_0203 | 237 | 59.8 | 0.259 | 212 |
| strn:SNAG_1646 | 236 | 59.6 | 0.224 | 241 |
| strn:SNAG_1375 | 234 | 59.1 | 0.272 | 217 |
| strn:SNAG_0202 | 234 | 59.1 | 0.250 | 204 |
| strn:SNAG_0918 | 233 | 58.9 | 0.243 | 255 |
| strn:SNAG_1891 | 228 | 57.8 | 0.246 | 236 |
| strn:SNAG_0731 | 215 | 54.8 | 0.245 | 212 |
| strn:SNAG_0575 | 209 | 53.4 | 0.264 | 227 |
| strn:SNAG_1273 | 191 | 49.3 | 0.252 | 218 |
| strn:SNAG_1038 | 184 | 47.7 | 0.258 | 213 |