| Entry | SW_score | bits | identity | overlap |
| rpu:CDC45_04650 | 857 | 201.1 | 0.420 | 362 |
| rpu:CDC45_15045 | 467 | 112.2 | 0.306 | 340 |
| rpu:CDC45_05625 | 267 | 66.7 | 0.255 | 368 |
| rpu:CDC45_03680 | 241 | 60.7 | 0.237 | 372 |
| rpu:CDC45_23815 | 225 | 57.1 | 0.251 | 379 |
| rpu:CDC45_22335 | 220 | 55.9 | 0.256 | 391 |
| rpu:CDC45_06835 | 206 | 52.8 | 0.235 | 383 |
| rpu:CDC45_21110 | 196 | 50.5 | 0.273 | 297 |
| rpu:CDC45_12190 | 184 | 47.7 | 0.263 | 236 |
| rpu:CDC45_21580 | 174 | 45.5 | 0.269 | 175 |
| rpu:CDC45_09460 | 149 | 39.8 | 0.305 | 164 |