| Entry | SW_score | bits | identity | overlap |
| flu:CHH17_05905 | 299 | 74.0 | 0.352 | 125 |
| flu:CHH17_11035 | 296 | 73.3 | 0.340 | 162 |
| flu:CHH17_05910 | 286 | 71.0 | 0.328 | 134 |
| flu:CHH17_16970 | 252 | 63.2 | 0.300 | 150 |
| flu:CHH17_00390 | 243 | 61.2 | 0.328 | 122 |
| flu:CHH17_06760 | 234 | 59.1 | 0.318 | 129 |
| flu:CHH17_11960 | 162 | 42.7 | 0.267 | 120 |
| flu:CHH17_07650 | 160 | 42.3 | 0.252 | 163 |
| flu:CHH17_18945 | 158 | 41.8 | 0.260 | 150 |
| flu:CHH17_09110 | 120 | 33.1 | 0.306 | 111 |
| flu:CHH17_10575 | 102 | 29.0 | 0.341 | 44 |
| flu:CHH17_02135 | 100 | 28.6 | 0.333 | 60 |