| Entry | SW_score | bits | identity | overlap |
| smx:SM11_pD0625 | 363 | 88.5 | 0.266 | 297 |
| smx:SM11_pD1470 | 336 | 82.4 | 0.265 | 291 |
| smx:SM11_chr0996 | 329 | 80.8 | 0.255 | 298 |
| smx:SM11_pD0229 | 324 | 79.7 | 0.281 | 292 |
| smx:SM11_chr0417 | 311 | 76.7 | 0.250 | 248 |
| smx:SM11_pD0038 | 287 | 71.2 | 0.278 | 245 |
| smx:SM11_pC0385 | 268 | 66.9 | 0.265 | 275 |
| smx:SM11_pD1407 | 268 | 66.9 | 0.254 | 268 |
| smx:SM11_chr2696 | 260 | 65.1 | 0.251 | 299 |
| smx:SM11_pC0543 | 257 | 64.4 | 0.317 | 205 |
| smx:SM11_pD0130 | 256 | 64.1 | 0.206 | 253 |
| smx:SM11_pC0658 | 245 | 61.6 | 0.255 | 290 |
| smx:SM11_chr0419 | 241 | 60.7 | 0.253 | 249 |
| smx:SM11_pD0132 | 239 | 60.3 | 0.284 | 208 |
| smx:SM11_pC0386 | 238 | 60.0 | 0.243 | 276 |
| smx:SM11_chr1999 | 236 | 59.6 | 0.250 | 276 |
| smx:SM11_pC0454 | 236 | 59.6 | 0.250 | 248 |
| smx:SM11_chr3148 | 232 | 58.7 | 0.232 | 280 |
| smx:SM11_chr3766 | 227 | 57.5 | 0.309 | 194 |
| smx:SM11_chr0061 | 225 | 57.1 | 0.248 | 294 |
| smx:SM11_pC1431 | 224 | 56.9 | 0.346 | 133 |
| smx:SM11_pC1270 | 222 | 56.4 | 0.260 | 289 |
| smx:SM11_pD0749 | 220 | 55.9 | 0.243 | 243 |
| smx:SM11_chr3191 | 219 | 55.7 | 0.227 | 278 |
| smx:SM11_chr1337 | 218 | 55.5 | 0.240 | 279 |
| smx:SM11_pC1537 | 216 | 55.0 | 0.214 | 243 |
| smx:SM11_pC0517 | 215 | 54.8 | 0.250 | 240 |
| smx:SM11_pC0767 | 215 | 54.8 | 0.245 | 298 |
| smx:SM11_pC0509 | 212 | 54.1 | 0.250 | 256 |
| smx:SM11_pC0482 | 211 | 53.9 | 0.259 | 290 |
| smx:SM11_pD0196 | 209 | 53.4 | 0.216 | 292 |
| smx:SM11_pC0629 | 208 | 53.2 | 0.276 | 123 |
| smx:SM11_pC0504 | 208 | 53.2 | 0.212 | 260 |
| smx:SM11_pC1214 | 207 | 53.0 | 0.202 | 262 |
| smx:SM11_pC1236 | 207 | 53.0 | 0.202 | 262 |
| smx:SM11_chr3089 | 204 | 52.3 | 0.258 | 155 |
| smx:SM11_pC0568 | 200 | 51.4 | 0.206 | 267 |
| smx:SM11_chr3005 | 197 | 50.7 | 0.251 | 271 |
| smx:SM11_chr3410 | 196 | 50.5 | 0.256 | 297 |
| smx:SM11_pD0459 | 193 | 49.8 | 0.292 | 144 |
| smx:SM11_pD1325 | 193 | 49.8 | 0.254 | 276 |
| smx:SM11_chr2923 | 191 | 49.3 | 0.267 | 146 |
| smx:SM11_chr0858 | 187 | 48.4 | 0.288 | 125 |
| smx:SM11_pC0432 | 186 | 48.2 | 0.260 | 296 |
| smx:SM11_pC1735 | 184 | 47.7 | 0.266 | 192 |
| smx:SM11_pC0489 | 182 | 47.3 | 0.254 | 169 |
| smx:SM11_pD0043 | 180 | 46.8 | 0.281 | 139 |
| smx:SM11_pC0985 | 179 | 46.6 | 0.255 | 192 |
| smx:SM11_pC0699 | 174 | 45.5 | 0.266 | 124 |
| smx:SM11_pC1472 | 174 | 45.5 | 0.250 | 296 |
| smx:SM11_pC0058 | 168 | 44.1 | 0.323 | 130 |
| smx:SM11_pC1648 | 168 | 44.1 | 0.272 | 195 |
| smx:SM11_pC0061 | 167 | 43.9 | 0.266 | 297 |
| smx:SM11_chr0472 | 165 | 43.4 | 0.309 | 123 |
| smx:SM11_chr3548 | 154 | 40.9 | 0.309 | 97 |
| smx:SM11_pC0360 | 154 | 40.9 | 0.250 | 144 |