| Entry | SW_score | bits | identity | overlap |
| pol:Bpro_0484 | 1426 | 330.8 | 0.452 | 524 |
| pol:Bpro_0057 | 171 | 44.8 | 0.283 | 180 |
| pol:Bpro_2706 | 140 | 37.7 | 0.397 | 58 |
| pol:Bpro_4373 | 114 | 31.8 | 0.372 | 78 |
| pol:Bpro_5110 | 112 | 31.3 | 0.353 | 51 |
| pol:Bpro_1884 | 108 | 30.4 | 0.341 | 41 |
| pol:Bpro_4398 | 103 | 29.3 | 0.552 | 29 |
| pol:Bpro_0073 | 101 | 28.8 | 0.347 | 72 |
| pol:Bpro_4346 | 100 | 28.6 | 0.310 | 87 |