| Entry | SW_score | bits | identity | overlap |
| ppa:PAS_chr3_1112 | 1965 | 453.7 | 0.495 | 624 |
| ppa:PAS_chr3_0732 | 406 | 98.3 | 0.274 | 442 |
| ppa:PAS_chr1-1_0254 | 185 | 48.0 | 0.261 | 306 |
| ppa:PAS_chr3_0486 | 184 | 47.7 | 0.264 | 208 |
| ppa:PAS_chr3_0514 | 176 | 45.9 | 0.270 | 304 |
| ppa:PAS_chr2-2_0482 | 169 | 44.3 | 0.301 | 163 |
| ppa:PAS_chr2-1_0646 | 156 | 41.4 | 0.331 | 121 |
| ppa:PAS_chr3_0383 | 128 | 35.0 | 0.309 | 97 |
| ppa:PAS_chr4_0185 | 128 | 35.0 | 0.302 | 106 |
| ppa:PAS_chr1-4_0409 | 126 | 34.5 | 0.316 | 79 |
| ppa:PAS_chr1-3_0063 | 111 | 31.1 | 0.308 | 65 |
| ppa:PAS_chr3_0340 | 101 | 28.8 | 0.333 | 84 |