| Entry | SW_score | bits | identity | overlap |
| pmad:BAY61_03830 | 237 | 59.8 | 0.261 | 522 |
| pmad:BAY61_31545 | 233 | 58.9 | 0.220 | 964 |
| pmad:BAY61_17425 | 209 | 53.4 | 0.230 | 270 |
| pmad:BAY61_20785 | 206 | 52.8 | 0.229 | 523 |
| pmad:BAY61_01085 | 205 | 52.5 | 0.242 | 455 |
| pmad:BAY61_22465 | 196 | 50.5 | 0.263 | 445 |
| pmad:BAY61_08155 | 193 | 49.8 | 0.252 | 408 |
| pmad:BAY61_00475 | 183 | 47.5 | 0.328 | 134 |
| pmad:BAY61_21885 | 173 | 45.2 | 0.300 | 150 |
| pmad:BAY61_07455 | 166 | 43.6 | 0.290 | 169 |
| pmad:BAY61_21890 | 165 | 43.4 | 0.275 | 193 |
| pmad:BAY61_02215 | 160 | 42.3 | 0.253 | 360 |
| pmad:BAY61_10520 | 159 | 42.0 | 0.276 | 239 |
| pmad:BAY61_31450 | 157 | 41.6 | 0.315 | 124 |
| pmad:BAY61_20780 | 150 | 40.0 | 0.265 | 336 |
| pmad:BAY61_15465 | 136 | 36.8 | 0.364 | 107 |
| pmad:BAY61_18075 | 132 | 35.9 | 0.320 | 128 |
| pmad:BAY61_31430 | 128 | 35.0 | 0.312 | 93 |
| pmad:BAY61_29975 | 125 | 34.3 | 0.310 | 126 |
| pmad:BAY61_25115 | 122 | 33.6 | 0.380 | 79 |
| pmad:BAY61_08300 | 116 | 32.2 | 0.320 | 97 |
| pmad:BAY61_09895 | 112 | 31.3 | 0.368 | 76 |
| pmad:BAY61_05835 | 111 | 31.1 | 0.321 | 137 |
| pmad:BAY61_03185 | 111 | 31.1 | 0.305 | 128 |
| pmad:BAY61_23255 | 109 | 30.6 | 0.413 | 46 |
| pmad:BAY61_27140 | 108 | 30.4 | 0.338 | 74 |
| pmad:BAY61_02935 | 106 | 30.0 | 0.300 | 180 |
| pmad:BAY61_08310 | 105 | 29.7 | 0.323 | 161 |
| pmad:BAY61_27935 | 104 | 29.5 | 0.302 | 126 |
| pmad:BAY61_02605 | 103 | 29.3 | 0.368 | 68 |
| pmad:BAY61_01205 | 103 | 29.3 | 0.300 | 110 |
| pmad:BAY61_04265 | 101 | 28.8 | 0.338 | 65 |