| Entry | SW_score | bits | identity | overlap |
| rca:Rcas_2819 | 276 | 68.7 | 0.234 | 920 |
| rca:Rcas_0679 | 263 | 65.7 | 0.237 | 582 |
| rca:Rcas_1659 | 223 | 56.6 | 0.308 | 172 |
| rca:Rcas_1813 | 210 | 53.7 | 0.253 | 304 |
| rca:Rcas_2879 | 199 | 51.2 | 0.341 | 173 |
| rca:Rcas_2219 | 192 | 49.6 | 0.270 | 366 |
| rca:Rcas_3418 | 184 | 47.7 | 0.285 | 151 |
| rca:Rcas_1741 | 179 | 46.6 | 0.283 | 230 |
| rca:Rcas_1479 | 178 | 46.4 | 0.293 | 147 |
| rca:Rcas_3047 | 176 | 45.9 | 0.321 | 187 |
| rca:Rcas_0533 | 175 | 45.7 | 0.257 | 307 |
| rca:Rcas_1188 | 173 | 45.2 | 0.316 | 187 |
| rca:Rcas_3489 | 172 | 45.0 | 0.251 | 335 |
| rca:Rcas_4046 | 169 | 44.3 | 0.295 | 156 |
| rca:Rcas_2521 | 161 | 42.5 | 0.383 | 94 |
| rca:Rcas_0099 | 161 | 42.5 | 0.310 | 187 |
| rca:Rcas_1650 | 160 | 42.3 | 0.280 | 186 |
| rca:Rcas_2293 | 155 | 41.1 | 0.294 | 163 |
| rca:Rcas_0510 | 154 | 40.9 | 0.296 | 162 |
| rca:Rcas_2270 | 153 | 40.7 | 0.263 | 175 |
| rca:Rcas_3116 | 153 | 40.7 | 0.258 | 159 |
| rca:Rcas_0391 | 152 | 40.4 | 0.336 | 107 |
| rca:Rcas_3610 | 151 | 40.2 | 0.360 | 89 |
| rca:Rcas_3630 | 150 | 40.0 | 0.263 | 194 |
| rca:Rcas_2271 | 147 | 39.3 | 0.347 | 118 |
| rca:Rcas_4107 | 145 | 38.8 | 0.301 | 103 |
| rca:Rcas_2011 | 141 | 37.9 | 0.382 | 68 |
| rca:Rcas_2275 | 140 | 37.7 | 0.335 | 176 |
| rca:Rcas_1300 | 130 | 35.4 | 0.312 | 125 |
| rca:Rcas_0063 | 130 | 35.4 | 0.310 | 129 |
| rca:Rcas_4427 | 128 | 35.0 | 0.375 | 72 |
| rca:Rcas_0331 | 126 | 34.5 | 0.345 | 116 |
| rca:Rcas_0227 | 123 | 33.8 | 0.361 | 97 |
| rca:Rcas_1287 | 120 | 33.1 | 0.309 | 123 |
| rca:Rcas_2424 | 119 | 32.9 | 0.326 | 92 |
| rca:Rcas_1858 | 117 | 32.5 | 0.306 | 209 |
| rca:Rcas_2454 | 113 | 31.6 | 0.301 | 93 |
| rca:Rcas_2800 | 112 | 31.3 | 0.379 | 66 |
| rca:Rcas_0065 | 111 | 31.1 | 0.360 | 75 |
| rca:Rcas_1234 | 107 | 30.2 | 0.362 | 80 |
| rca:Rcas_1258 | 107 | 30.2 | 0.341 | 88 |
| rca:Rcas_1153 | 106 | 30.0 | 0.312 | 80 |
| rca:Rcas_1363 | 105 | 29.7 | 0.337 | 89 |
| rca:Rcas_0223 | 105 | 29.7 | 0.333 | 39 |
| rca:Rcas_0198 | 104 | 29.5 | 0.395 | 43 |
| rca:Rcas_0038 | 103 | 29.3 | 0.407 | 54 |
| rca:Rcas_0466 | 103 | 29.3 | 0.358 | 53 |
| rca:Rcas_1602 | 103 | 29.3 | 0.333 | 99 |
| rca:Rcas_1750 | 103 | 29.3 | 0.324 | 102 |
| rca:Rcas_2851 | 102 | 29.0 | 0.386 | 44 |
| rca:Rcas_4045 | 102 | 29.0 | 0.312 | 109 |
| rca:Rcas_0844 | 101 | 28.8 | 0.349 | 86 |
| rca:Rcas_1689 | 100 | 28.6 | 0.317 | 104 |