| Entry | SW_score | bits | identity | overlap |
| cyp:PCC8801_0125 | 248 | 62.3 | 0.257 | 311 |
| cyp:PCC8801_0446 | 266 | 66.4 | 0.269 | 331 |
| cyp:PCC8801_0857 | 229 | 58.0 | 0.307 | 225 |
| cyp:PCC8801_0929 | 269 | 67.1 | 0.312 | 221 |
| cyp:PCC8801_1808 | 178 | 46.4 | 0.266 | 241 |
| cyp:PCC8801_2082 | 224 | 56.9 | 0.286 | 269 |
| cyp:PCC8801_2237 | 273 | 68.0 | 0.262 | 347 |
| cyp:PCC8801_2285 | 209 | 53.4 | 0.231 | 407 |
| cyp:PCC8801_2423 | 205 | 52.5 | 0.293 | 232 |
| cyp:PCC8801_3289 | 225 | 57.1 | 0.258 | 341 |
| cyp:PCC8801_3474 | 197 | 50.7 | 0.261 | 211 |
| cyp:PCC8801_4035 | 206 | 52.8 | 0.302 | 205 |