| Entry | SW_score | bits | identity | overlap |
| ypa:YPA_0500 | 970 | 226.9 | 0.510 | 300 |
| ypa:YPA_1956 | 379 | 92.2 | 0.293 | 297 |
| ypa:YPA_3159 | 364 | 88.8 | 0.280 | 296 |
| ypa:YPA_1087 | 328 | 80.6 | 0.292 | 264 |
| ypa:YPA_1992 | 312 | 76.9 | 0.275 | 262 |
| ypa:YPA_2553 | 281 | 69.8 | 0.305 | 256 |
| ypa:YPA_4006 | 276 | 68.7 | 0.245 | 290 |
| ypa:YPA_3122 | 265 | 66.2 | 0.258 | 295 |
| ypa:YPA_0235 | 254 | 63.7 | 0.309 | 191 |
| ypa:YPA_1627 | 244 | 61.4 | 0.315 | 165 |
| ypa:YPA_1508 | 244 | 61.4 | 0.242 | 260 |
| ypa:YPA_3696 | 229 | 58.0 | 0.211 | 294 |
| ypa:YPA_1077 | 222 | 56.4 | 0.252 | 278 |
| ypa:YPA_0472 | 205 | 52.5 | 0.223 | 301 |
| ypa:YPA_0470 | 201 | 51.6 | 0.248 | 262 |
| ypa:YPA_1025 | 200 | 51.4 | 0.249 | 281 |
| ypa:YPA_1733 | 199 | 51.2 | 0.270 | 319 |
| ypa:YPA_2048 | 193 | 49.8 | 0.267 | 296 |
| ypa:YPA_1316 | 182 | 47.3 | 0.305 | 174 |
| ypa:YPA_1307 | 181 | 47.1 | 0.282 | 188 |
| ypa:YPA_2719 | 160 | 42.3 | 0.253 | 241 |
| ypa:YPA_2168 | 159 | 42.0 | 0.261 | 249 |
| ypa:YPA_0131 | 158 | 41.8 | 0.309 | 149 |
| ypa:YPA_0118 | 158 | 41.8 | 0.256 | 219 |
| ypa:YPA_3695 | 138 | 37.3 | 0.368 | 76 |
| ypa:YPA_4065 | 138 | 37.3 | 0.323 | 93 |