| Entry | SW_score | bits | identity | overlap |
| prun:PCC7821_01131 | 325 | 79.9 | 0.250 | 420 |
| prun:PCC7821_00770 | 323 | 79.4 | 0.258 | 291 |
| prun:PCC7821_02716 | 286 | 71.0 | 0.260 | 362 |
| prun:PCC7821_03963 | 273 | 68.0 | 0.256 | 332 |
| prun:PCC7821_03466 | 262 | 65.5 | 0.260 | 258 |
| prun:PCC7821_03888 | 257 | 64.4 | 0.277 | 231 |
| prun:PCC7821_03170 | 255 | 63.9 | 0.290 | 214 |
| prun:PCC7821_04718 | 247 | 62.1 | 0.258 | 295 |
| prun:PCC7821_02708 | 244 | 61.4 | 0.234 | 325 |
| prun:PCC7821_03933 | 240 | 60.5 | 0.247 | 373 |
| prun:PCC7821_03860 | 234 | 59.1 | 0.219 | 306 |
| prun:PCC7821_02090 | 232 | 58.7 | 0.214 | 392 |
| prun:PCC7821_04887 | 224 | 56.9 | 0.249 | 425 |
| prun:PCC7821_04419 | 222 | 56.4 | 0.241 | 303 |
| prun:PCC7821_00040 | 219 | 55.7 | 0.246 | 281 |
| prun:PCC7821_03283 | 216 | 55.0 | 0.273 | 205 |
| prun:PCC7821_03694 | 215 | 54.8 | 0.252 | 397 |
| prun:PCC7821_01846 | 212 | 54.1 | 0.251 | 374 |
| prun:PCC7821_00531 | 209 | 53.4 | 0.249 | 305 |
| prun:PCC7821_03152 | 208 | 53.2 | 0.236 | 275 |
| prun:PCC7821_03478 | 203 | 52.1 | 0.227 | 331 |
| prun:PCC7821_00739 | 193 | 49.8 | 0.265 | 219 |
| prun:PCC7821_03537 | 102 | 29.0 | 0.302 | 86 |