| Entry | SW_score | bits | identity | overlap |
| pol:Bpro_2189 | 1686 | 390.1 | 0.596 | 403 |
| pol:Bpro_1410 | 407 | 98.6 | 0.276 | 398 |
| pol:Bpro_2888 | 368 | 89.7 | 0.249 | 398 |
| pol:Bpro_3262 | 358 | 87.4 | 0.263 | 372 |
| pol:Bpro_2403 | 292 | 72.4 | 0.254 | 268 |
| pol:Bpro_1997 | 227 | 57.5 | 0.220 | 404 |
| pol:Bpro_4240 | 226 | 57.3 | 0.248 | 355 |
| pol:Bpro_3951 | 216 | 55.0 | 0.233 | 391 |
| pol:Bpro_2746 | 205 | 52.5 | 0.234 | 402 |
| pol:Bpro_0805 | 193 | 49.8 | 0.284 | 197 |
| pol:Bpro_1696 | 171 | 44.8 | 0.259 | 220 |
| pol:Bpro_3442 | 166 | 43.6 | 0.268 | 224 |
| pol:Bpro_2911 | 159 | 42.0 | 0.250 | 188 |