| Entry | SW_score | bits | identity | overlap |
| syp:SYNPCC7002_A2627 | 316 | 77.8 | 0.196 | 810 |
| syp:SYNPCC7002_A1376 | 258 | 64.6 | 0.242 | 542 |
| syp:SYNPCC7002_A1118 | 234 | 59.1 | 0.191 | 639 |
| syp:SYNPCC7002_A2510 | 221 | 56.2 | 0.247 | 485 |
| syp:SYNPCC7002_D0027 | 201 | 51.6 | 0.239 | 401 |
| syp:SYNPCC7002_A0156 | 155 | 41.1 | 0.250 | 192 |
| syp:SYNPCC7002_A1022 | 105 | 29.7 | 0.341 | 88 |