| Entry | SW_score | bits | identity | overlap |
| pmad:BAY61_00225 | 411 | 99.5 | 0.314 | 242 |
| pmad:BAY61_10515 | 383 | 93.1 | 0.291 | 265 |
| pmad:BAY61_11330 | 371 | 90.4 | 0.303 | 261 |
| pmad:BAY61_10520 | 369 | 89.9 | 0.305 | 256 |
| pmad:BAY61_03190 | 334 | 81.9 | 0.305 | 256 |
| pmad:BAY61_27110 | 333 | 81.7 | 0.259 | 255 |
| pmad:BAY61_19320 | 328 | 80.6 | 0.256 | 394 |
| pmad:BAY61_05410 | 324 | 79.7 | 0.272 | 283 |
| pmad:BAY61_23875 | 317 | 78.1 | 0.285 | 260 |
| pmad:BAY61_00230 | 290 | 71.9 | 0.254 | 248 |
| pmad:BAY61_03620 | 286 | 71.0 | 0.265 | 223 |
| pmad:BAY61_08975 | 284 | 70.5 | 0.272 | 224 |
| pmad:BAY61_28185 | 283 | 70.3 | 0.264 | 235 |
| pmad:BAY61_03185 | 273 | 68.0 | 0.282 | 252 |
| pmad:BAY61_21910 | 255 | 63.9 | 0.252 | 258 |
| pmad:BAY61_27140 | 245 | 61.6 | 0.251 | 279 |
| pmad:BAY61_27135 | 243 | 61.2 | 0.249 | 281 |
| pmad:BAY61_22380 | 241 | 60.7 | 0.223 | 381 |
| pmad:BAY61_05325 | 229 | 58.0 | 0.257 | 214 |
| pmad:BAY61_26760 | 100 | 28.6 | 0.302 | 96 |