| Entry | SW_score | bits | identity | overlap |
| rca:Rcas_3449 | 355 | 86.7 | 0.250 | 472 |
| rca:Rcas_1728 | 129 | 35.2 | 0.308 | 107 |
| rca:Rcas_1650 | 123 | 33.8 | 0.397 | 58 |
| rca:Rcas_1659 | 122 | 33.6 | 0.310 | 71 |
| rca:Rcas_4046 | 121 | 33.4 | 0.452 | 42 |
| rca:Rcas_4159 | 116 | 32.2 | 0.429 | 49 |
| rca:Rcas_3090 | 115 | 32.0 | 0.455 | 44 |
| rca:Rcas_0331 | 115 | 32.0 | 0.379 | 58 |
| rca:Rcas_3418 | 115 | 32.0 | 0.301 | 73 |
| rca:Rcas_3601 | 112 | 31.3 | 0.526 | 38 |
| rca:Rcas_3276 | 112 | 31.3 | 0.352 | 71 |
| rca:Rcas_2810 | 111 | 31.1 | 0.386 | 57 |
| rca:Rcas_4206 | 111 | 31.1 | 0.365 | 74 |
| rca:Rcas_3047 | 110 | 30.9 | 0.396 | 48 |
| rca:Rcas_0555 | 110 | 30.9 | 0.304 | 56 |
| rca:Rcas_0548 | 110 | 30.9 | 0.300 | 90 |
| rca:Rcas_1412 | 109 | 30.6 | 0.325 | 77 |
| rca:Rcas_3450 | 109 | 30.6 | 0.325 | 77 |
| rca:Rcas_0265 | 108 | 30.4 | 0.321 | 53 |
| rca:Rcas_0391 | 107 | 30.2 | 0.513 | 39 |
| rca:Rcas_0510 | 107 | 30.2 | 0.357 | 84 |
| rca:Rcas_0565 | 106 | 30.0 | 0.500 | 32 |
| rca:Rcas_0533 | 105 | 29.7 | 0.415 | 41 |
| rca:Rcas_3490 | 104 | 29.5 | 0.347 | 75 |
| rca:Rcas_2805 | 104 | 29.5 | 0.311 | 74 |
| rca:Rcas_3351 | 103 | 29.3 | 0.395 | 43 |
| rca:Rcas_4427 | 101 | 28.8 | 0.500 | 28 |
| rca:Rcas_1399 | 100 | 28.6 | 0.378 | 37 |
| rca:Rcas_2303 | 100 | 28.6 | 0.357 | 42 |
| rca:Rcas_2395 | 100 | 28.6 | 0.348 | 66 |
| rca:Rcas_1741 | 100 | 28.6 | 0.339 | 62 |
| rca:Rcas_2672 | 100 | 28.6 | 0.333 | 48 |